FFCP PHASE1:Hg19::chr5:77656342..77656362,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:77656342..77656362,+ to FFCP PHASE1:Hg19::chr5:77656342..77656362,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9522 | |EntrezGene=9522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10563 | |HGNC=10563 | ||
|TSSclassifier=strong | |||
|UniProt=O15126 | |UniProt=O15126 | ||
|association_with_transcript=3bp_to_ENST00000538629,NM_004866,uc003kfl.2,uc010jaa.2,uc011ctc.1,uc011ctd.1_5end | |||
|cluster_id=chr5:77656342..77656362,+ | |||
|coexpression_cluster_id=C2829 | |||
|description=CAGE_peak_2_at_SCAMP1_5end | |||
|id=chr5:77656342..77656362,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.54e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-33!115;UBERON:0001017!3.33e-31!82;UBERON:0005743!5.95e-31!86;UBERON:0000073!1.18e-30!94;UBERON:0001016!1.18e-30!94;UBERON:0001049!2.68e-27!57;UBERON:0005068!2.68e-27!57;UBERON:0006241!2.68e-27!57;UBERON:0007135!2.68e-27!57;UBERON:0000955!1.44e-26!69;UBERON:0006238!1.44e-26!69;UBERON:0002616!1.09e-23!59;UBERON:0003080!8.30e-23!42;UBERON:0002780!2.86e-22!41;UBERON:0001890!2.86e-22!41;UBERON:0006240!2.86e-22!41;UBERON:0003075!1.93e-20!86;UBERON:0007284!1.93e-20!86;UBERON:0000033!3.61e-19!123;UBERON:0000153!7.79e-19!129;UBERON:0007811!7.79e-19!129;UBERON:0004121!1.35e-18!169;UBERON:0002346!1.45e-18!90;UBERON:0002020!4.01e-18!34;UBERON:0003528!4.01e-18!34;UBERON:0001893!5.19e-18!34;UBERON:0000924!1.82e-17!173;UBERON:0006601!1.82e-17!173;UBERON:0002791!2.08e-17!33;UBERON:0001869!4.25e-17!32;UBERON:0003056!3.54e-16!61;UBERON:0002619!1.34e-14!22;UBERON:0000956!1.45e-13!25;UBERON:0000203!1.45e-13!25;UBERON:0001950!1.47e-13!20;UBERON:0000062!2.71e-10!511;UBERON:0000922!1.22e-07!612;UBERON:0000468!4.94e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.56e-16;41!UBERON:0001890;1.56e-16;41!UBERON:0003528;5.72e-16;34!UBERON:0002020;5.72e-16;34!UBERON:0001869;8.33e-16;32!UBERON:0001893;8.37e-16;34!UBERON:0002791;1.15e-15;32!UBERON:0000073;5.88e-15;53!UBERON:0002616;5.88e-15;53!UBERON:0002619;9.66e-15;22!UBERON:0000956;7.93e-14;25!UBERON:0000203;7.93e-14;25!UBERON:0001950;1.05e-13;20!UBERON:0000955;8.21e-13;68!UBERON:0001017;1.39e-12;75!UBERON:0001016;4.79e-12;83!UBERON:0007023;7.10e-10;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.70e-33,114;UBERON:0001017,1.18e-30,81;UBERON:0001016,2.88e-30,89;UBERON:0001049,9.36e-27,56;UBERON:0005068,9.36e-27,56;UBERON:0006241,9.36e-27,56;UBERON:0007135,9.36e-27,56;UBERON:0000955,4.94e-26,68;UBERON:0006238,4.94e-26,68;UBERON:0000073,5.42e-25,53;UBERON:0002616,5.42e-25,53;UBERON:0002780,2.84e-22,41;UBERON:0001890,2.84e-22,41;UBERON:0003080,2.84e-22,41;UBERON:0006240,2.84e-22,41;UBERON:0003075,1.43e-19,82;UBERON:0007284,1.43e-19,82;UBERON:0003528,3.99e-18,34;UBERON:0002020,3.99e-18,34;UBERON:0001893,5.16e-18,34;UBERON:0002346,1.06e-17,86;UBERON:0001869,4.23e-17,32;UBERON:0002791,5.79e-17,32;UBERON:0011216,1.05e-16,223;UBERON:0003056,3.05e-16,61;UBERON:0004121,4.87e-16,171;UBERON:0000924,4.87e-16,171;UBERON:0006601,4.87e-16,171;UBERON:0002619,1.34e-14,22;UBERON:0000956,1.45e-13,25;UBERON:0000203,1.45e-13,25;UBERON:0001950,1.46e-13,20;UBERON:0010371,4.61e-12,104;UBERON:0010314,2.29e-11,132;UBERON:0000922,5.25e-08,592;UBERON:0005423,6.54e-07,581 | |||
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| ||
|short_description=p2@SCAMP1 | |||
}} | }} |
Latest revision as of 20:00, 18 September 2015
Short description: | p2@SCAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCAMP1_5end |
Coexpression cluster: | C2829_pineal_cerebellum_occipital_thalamus_medial_globus_parietal |
Association with transcript: | 3bp_to_ENST00000538629, NM_004866, uc003kfl.2, uc010jaa.2, uc011ctc.1, uc011ctd.1_5end |
EntrezGene: | SCAMP1 |
HGNC: | 10563 |
UniProt: | O15126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data