FFCP PHASE1:Hg19::chr6:167764803..167764819,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:167764803..167764819,- to FFCP PHASE1:Hg19::chr6:167764803..167764819,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=146bp_to_AK000257_5end | |||
|cluster_id=chr6:167764803..167764819,- | |||
|description=CAGE_peak_2_at_AK000257_5end | |||
|id=chr6:167764803..167764819,- | |||
|ontology_enrichment_celltype=CL:0000080!1.32e-14!6;CL:0000623!2.67e-08!3;CL:0000825!2.67e-08!3;CL:0000842!2.13e-07!3;CL:0000624!4.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.72e-13;4!CL:0000791;3.11e-11;18!CL:0000789;3.11e-11;18!CL:0002419;3.11e-11;18!CL:0000624;3.56e-09;6!CL:0000084;3.76e-08;25!CL:0002253;1.75e-07;2!CL:0002535;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.95e-13,4;CL:0000791,2.58e-11,18;CL:0000789,2.58e-11,18;CL:0002420,2.58e-11,18;CL:0002419,2.58e-11,18;CL:0000790,2.58e-11,18;CL:0000624,3.14e-09,6;CL:0000084,3.29e-08,25;CL:0000827,3.29e-08,25;CL:0002253,1.99e-07,2;CL:0002535,2.40e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.11e-11;18!UBERON:0006965;1.75e-07;2!UBERON:0007297;1.75e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.54e-09!15;UBERON:0000179!2.54e-09!15;UBERON:0000463!2.54e-09!15;UBERON:0007023!2.68e-09!115;UBERON:0001893!7.05e-09!34;UBERON:0001869!3.14e-08!32;UBERON:0000956!7.49e-08!25;UBERON:0000203!7.49e-08!25;UBERON:0002791!8.48e-08!33;UBERON:0002619!1.52e-07!22;UBERON:0001049!1.66e-07!57;UBERON:0005068!1.66e-07!57;UBERON:0006241!1.66e-07!57;UBERON:0007135!1.66e-07!57;UBERON:0002616!3.97e-07!59;UBERON:0002780!6.71e-07!41;UBERON:0001890!6.71e-07!41;UBERON:0006240!6.71e-07!41;UBERON:0001950!7.78e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.38e-26;2!UBERON:0005058;1.38e-26;2!UBERON:0009113;1.38e-26;2!UBERON:0001301;1.10e-13;1!UBERON:0001242;1.72e-13;4!UBERON:0001262;1.72e-13;4!UBERON:0004786;1.72e-13;4!UBERON:0004808;1.72e-13;4!UBERON:0001277;1.72e-13;4!UBERON:0002331;8.42e-12;10!UBERON:0004177;3.12e-11;5!UBERON:0005057;3.12e-11;5!UBERON:0002390;1.08e-08;32!UBERON:0000485;4.27e-08;7!UBERON:0003929;4.27e-08;7!UBERON:0000178;4.76e-08;15!UBERON:0000179;4.76e-08;15!UBERON:0000463;4.76e-08;15!UBERON:0006955;1.75e-07;2!UBERON:0004801;1.75e-07;2!UBERON:0003350;3.45e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,7.55e-14,1;UBERON:0002370,8.59e-14,4;UBERON:0005058,8.59e-14,4;UBERON:0009113,8.59e-14,4;UBERON:0003295,8.59e-14,4;UBERON:0005562,8.59e-14,4;UBERON:0001242,1.95e-13,4;UBERON:0001262,1.95e-13,4;UBERON:0004786,1.95e-13,4;UBERON:0004808,1.95e-13,4;UBERON:0001277,1.95e-13,4;UBERON:0002331,7.82e-12,10;UBERON:0000358,7.82e-12,10;UBERON:0000307,7.82e-12,10;UBERON:0000091,7.82e-12,10;UBERON:0000087,7.82e-12,10;UBERON:0007010,7.82e-12,10;UBERON:0007806,7.82e-12,10;UBERON:0008780,7.82e-12,10;UBERON:0005728,7.82e-12,10;UBERON:0003351,1.68e-09,6;UBERON:0004177,2.88e-08,7;UBERON:0005057,2.88e-08,7;UBERON:0000178,4.54e-08,15;UBERON:0000179,4.54e-08,15;UBERON:0000463,4.54e-08,15;UBERON:0006955,2.40e-07,2;UBERON:0004801,2.40e-07,2;UBERON:0003350,3.67e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,1.57204305099666,1.43921049299656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,1.41124720257313,1.60464117470104,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,3.56666471775029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,4.47179963489002,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0,0,2.96521128680622,1.11207545051853,1.98401704060365,0.067401132980677,0,0,0,0,0,0,0,0,0,0.751617097072463,0.311064574191741,0,0,0,0,0,0,0,0,0,1.57254001417827,0.343972064943233,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,6.58806880327262,4.15900585782248,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,1.40891655513718,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,1.57204305099666,1.43921049299656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,1.41124720257313,1.60464117470104,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,3.56666471775029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,4.47179963489002,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0,0,2.96521128680622,1.11207545051853,1.98401704060365,0.067401132980677,0,0,0,0,0,0,0,0,0,0.751617097072463,0.311064574191741,0,0,0,0,0,0,0,0,0,1.57254001417827,0.343972064943233,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,6.58806880327262,4.15900585782248,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,1.40891655513718,0 | ||
|short_description=p2@AK000257 | |||
}} | }} |
Latest revision as of 22:11, 30 July 2015
Short description: | p2@AK000257 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK000257_5end |
Coexpression cluster: | NA |
Association with transcript: | 146bp_to_AK000257_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.95e-13 | 4 |
mature alpha-beta T cell | 2.58e-11 | 18 |
alpha-beta T cell | 2.58e-11 | 18 |
immature T cell | 2.58e-11 | 18 |
mature T cell | 2.58e-11 | 18 |
immature alpha-beta T cell | 2.58e-11 | 18 |
CD4-positive, alpha-beta T cell | 3.14e-09 | 6 |
T cell | 3.29e-08 | 25 |
pro-T cell | 3.29e-08 | 25 |
epithelial cell of large intestine | 1.99e-07 | 2 |
epithelial cell of cervix | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 7.55e-14 | 1 |
thymus | 8.59e-14 | 4 |
hemolymphoid system gland | 8.59e-14 | 4 |
thymic region | 8.59e-14 | 4 |
pharyngeal gland | 8.59e-14 | 4 |
thymus primordium | 8.59e-14 | 4 |
intestinal mucosa | 1.95e-13 | 4 |
wall of intestine | 1.95e-13 | 4 |
gastrointestinal system mucosa | 1.95e-13 | 4 |
gastrointestinal system epithelium | 1.95e-13 | 4 |
intestinal epithelium | 1.95e-13 | 4 |
umbilical cord | 7.82e-12 | 10 |
blastocyst | 7.82e-12 | 10 |
blastula | 7.82e-12 | 10 |
bilaminar disc | 7.82e-12 | 10 |
inner cell mass | 7.82e-12 | 10 |
cleaving embryo | 7.82e-12 | 10 |
connecting stalk | 7.82e-12 | 10 |
inner cell mass derived epiblast | 7.82e-12 | 10 |
extraembryonic mesoderm | 7.82e-12 | 10 |
pharyngeal epithelium | 1.68e-09 | 6 |
hemopoietic organ | 2.88e-08 | 7 |
immune organ | 2.88e-08 | 7 |
blood | 4.54e-08 | 15 |
haemolymphatic fluid | 4.54e-08 | 15 |
organism substance | 4.54e-08 | 15 |
uterine epithelium | 2.40e-07 | 2 |
cervix epithelium | 2.40e-07 | 2 |
epithelium of mucosa | 3.67e-07 | 8 |