FFCP PHASE1:Hg19::chr8:22224760..22224800,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:22224760..22224800,+ to FFCP PHASE1:Hg19::chr8:22224760..22224800,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23516 | |EntrezGene=23516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20858 | |HGNC=20858 | ||
|TSSclassifier=strong | |||
|UniProt=B6EU88,E5RGA7,Q15043 | |UniProt=B6EU88,E5RGA7,Q15043 | ||
|association_with_transcript=0bp_to_ENST00000240095,ENST00000359741,ENST00000520644,NM_001128431,NM_001135154,NM_015359,uc003xbp.3,uc003xbq.3,uc011kzg.1_5end | |||
|cluster_id=chr8:22224760..22224800,+ | |||
|description=CAGE_peak_1_at_SLC39A14_5end | |||
|id=chr8:22224760..22224800,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.74e-18!180;CL:0002321!7.95e-13!248;CL:0000220!1.04e-12!246;CL:0000187!6.22e-10!54;CL:0000680!6.24e-10!57;CL:0000056!6.24e-10!57;CL:0000355!6.24e-10!57;CL:0000393!2.28e-09!60;CL:0000211!2.28e-09!60;CL:0000057!2.67e-09!75;CL:0000183!3.46e-09!59;CL:0000359!7.28e-09!32;CL:0000192!5.47e-08!42;CL:0000514!5.47e-08!42;CL:0000222!2.39e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.59e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.13e-13,250;CL:0000680,1.07e-09,58;CL:0000056,1.07e-09,58;CL:0000355,1.07e-09,58;CL:0000187,1.09e-09,55;CL:0000057,1.11e-09,76;CL:0000393,3.73e-09,61;CL:0000211,3.73e-09,61;CL:0000359,7.20e-09,32;CL:0000192,9.61e-08,43;CL:0000514,9.61e-08,43;CL:0000222,2.94e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.41e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.39e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.40e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!2.00e-17!347;UBERON:0005256!1.35e-16!143;UBERON:0003104!3.41e-16!238;UBERON:0009142!3.41e-16!238;UBERON:0003914!4.14e-15!118;UBERON:0002100!2.11e-13!216;UBERON:0000486!6.85e-13!82;UBERON:0000914!2.68e-12!83;UBERON:0002329!2.68e-12!83;UBERON:0003077!2.68e-12!83;UBERON:0003059!2.68e-12!83;UBERON:0007282!2.68e-12!83;UBERON:0009618!2.68e-12!83;UBERON:0007285!2.68e-12!83;UBERON:0000490!5.84e-12!138;UBERON:0000483!1.55e-11!309;UBERON:0000119!2.25e-11!312;UBERON:0004290!3.26e-11!70;UBERON:0002385!1.95e-10!63;UBERON:0001015!1.95e-10!63;UBERON:0000383!1.95e-10!63;UBERON:0004872!2.35e-10!84;UBERON:0000475!2.96e-10!365;UBERON:0007100!2.99e-10!27;UBERON:0001134!9.94e-10!61;UBERON:0002036!9.94e-10!61;UBERON:0003082!9.94e-10!61;UBERON:0001048!1.69e-09!168;UBERON:0000948!1.35e-08!24;UBERON:0005498!1.35e-08!24;UBERON:0004140!1.35e-08!24;UBERON:0009881!1.35e-08!24;UBERON:0004141!1.35e-08!24;UBERON:0003084!1.35e-08!24;UBERON:0007005!1.35e-08!24;UBERON:0004139!1.35e-08!24;UBERON:0004291!1.35e-08!24;UBERON:0000468!1.48e-08!659;UBERON:0000477!2.80e-08!286;UBERON:0004573!3.10e-08!33;UBERON:0004571!3.10e-08!33;UBERON:0001637!3.33e-08!42;UBERON:0003509!3.33e-08!42;UBERON:0004572!3.33e-08!42;UBERON:0000467!4.46e-08!625;UBERON:0000480!4.76e-08!626;UBERON:0000055!4.79e-08!69;UBERON:0004111!5.79e-08!241;UBERON:0003102!6.37e-08!95;UBERON:0001981!6.45e-08!60;UBERON:0007500!6.45e-08!60;UBERON:0004537!6.45e-08!60;UBERON:0006965!6.45e-08!60;UBERON:0002049!2.36e-07!79;UBERON:0007798!2.36e-07!79;UBERON:0001009!4.07e-07!113;UBERON:0004119!5.21e-07!169;UBERON:0000925!5.21e-07!169;UBERON:0006595!5.21e-07!169;UBERON:0001007!5.87e-07!155;UBERON:0001555!5.87e-07!155;UBERON:0007026!5.87e-07!155;UBERON:0003103!6.59e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.67e-10;25!UBERON:0000948;1.74e-08;22!UBERON:0004573;1.20e-07;33!UBERON:0004571;1.20e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.16e-18,160;UBERON:0009142,5.16e-18,160;UBERON:0005256,1.72e-15,122;UBERON:0003914,2.58e-15,117;UBERON:0000490,2.53e-13,148;UBERON:0000486,1.13e-12,83;UBERON:0002100,1.15e-12,199;UBERON:0002329,5.43e-11,71;UBERON:0003059,5.43e-11,71;UBERON:0007282,5.43e-11,71;UBERON:0004290,5.43e-11,71;UBERON:0009618,5.43e-11,71;UBERON:0007503,5.94e-11,78;UBERON:0000483,1.13e-10,306;UBERON:0007524,1.23e-10,73;UBERON:0000119,1.62e-10,309;UBERON:0003077,1.67e-10,72;UBERON:0007285,1.67e-10,72;UBERON:0007100,2.96e-10,27;UBERON:0002385,3.28e-10,64;UBERON:0001015,3.28e-10,64;UBERON:0000383,3.28e-10,64;UBERON:0004872,5.51e-10,83;UBERON:0001134,1.64e-09,62;UBERON:0002036,1.64e-09,62;UBERON:0003082,1.64e-09,62;UBERON:0000948,1.33e-08,24;UBERON:0005498,1.33e-08,24;UBERON:0004140,1.33e-08,24;UBERON:0009881,1.33e-08,24;UBERON:0004141,1.33e-08,24;UBERON:0003084,1.33e-08,24;UBERON:0007005,1.33e-08,24;UBERON:0004139,1.33e-08,24;UBERON:0004291,1.33e-08,24;UBERON:0001048,1.54e-08,160;UBERON:0004573,3.07e-08,33;UBERON:0004571,3.07e-08,33;UBERON:0001637,3.30e-08,42;UBERON:0003509,3.30e-08,42;UBERON:0004572,3.30e-08,42;UBERON:0003102,3.38e-08,99;UBERON:0004111,7.27e-08,240;UBERON:0000055,1.08e-07,68;UBERON:0007500,1.50e-07,59;UBERON:0001981,1.50e-07,59;UBERON:0004537,1.50e-07,59;UBERON:0006965,1.50e-07,59;UBERON:0003103,4.59e-07,68;UBERON:0002049,4.98e-07,78;UBERON:0007798,4.98e-07,78;UBERON:0001009,8.35e-07,112 | |||
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| ||
|short_description=p1@SLC39A14 | |||
}} | }} |
Latest revision as of 10:57, 17 September 2015
Short description: | p1@SLC39A14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC39A14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000240095, ENST00000359741, ENST00000520644, NM_001128431, NM_001135154, NM_015359, uc003xbp.3, uc003xbq.3, uc011kzg.1_5end |
EntrezGene: | SLC39A14 |
HGNC: | 20858 |
UniProt: | B6EU88E5RGA7Q15043 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.13e-13 | 250 |
muscle precursor cell | 1.07e-09 | 58 |
myoblast | 1.07e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.07e-09 | 58 |
muscle cell | 1.09e-09 | 55 |
fibroblast | 1.11e-09 | 76 |
electrically responsive cell | 3.73e-09 | 61 |
electrically active cell | 3.73e-09 | 61 |
vascular associated smooth muscle cell | 7.20e-09 | 32 |
smooth muscle cell | 9.61e-08 | 43 |
smooth muscle myoblast | 9.61e-08 | 43 |
mesodermal cell | 2.94e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.40e-07 | 14 |