FFCP PHASE1:Hg19::chr9:3525968..3526016,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:3525968..3526016,- to FFCP PHASE1:Hg19::chr9:3525968..3526016,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5991 | |EntrezGene=5991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9984 | |HGNC=9984 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGD7,E9PGD6,F6UGA0,P48380,F6XM74,Q5JTM2 | |UniProt=E9PGD7,E9PGD6,F6UGA0,P48380,F6XM74,Q5JTM2 | ||
|association_with_transcript=0bp_to_ENST00000302303,ENST00000381985,ENST00000381986,ENST00000381992,ENST00000382004,ENST00000449190,NM_002919,NM_134428,uc003zhr.2,uc003zhs.1,uc010mhd.2,uc010mhe.1_5end | |||
|cluster_id=chr9:3525968..3526016,- | |||
|coexpression_cluster_id=C4820 | |||
|description=CAGE_peak_1_at_RFX3_5end | |||
|id=chr9:3525968..3526016,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.64e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.56e-42!115;UBERON:0001049!4.51e-26!57;UBERON:0005068!4.51e-26!57;UBERON:0006241!4.51e-26!57;UBERON:0007135!4.51e-26!57;UBERON:0000073!5.72e-25!94;UBERON:0001016!5.72e-25!94;UBERON:0001017!1.40e-24!82;UBERON:0005743!2.72e-24!86;UBERON:0000955!1.60e-22!69;UBERON:0006238!1.60e-22!69;UBERON:0003080!1.38e-21!42;UBERON:0002616!1.50e-21!59;UBERON:0002780!5.68e-21!41;UBERON:0001890!5.68e-21!41;UBERON:0006240!5.68e-21!41;UBERON:0002346!1.13e-19!90;UBERON:0003075!1.98e-19!86;UBERON:0007284!1.98e-19!86;UBERON:0002020!9.32e-18!34;UBERON:0003528!9.32e-18!34;UBERON:0001893!2.26e-17!34;UBERON:0002791!5.44e-17!33;UBERON:0001869!1.45e-16!32;UBERON:0003056!5.18e-15!61;UBERON:0002619!3.39e-13!22;UBERON:0000956!3.60e-13!25;UBERON:0000203!3.60e-13!25;UBERON:0001950!2.51e-12!20;UBERON:0000153!1.98e-11!129;UBERON:0007811!1.98e-11!129;UBERON:0000033!1.02e-10!123;UBERON:0000924!2.94e-10!173;UBERON:0006601!2.94e-10!173;UBERON:0004121!6.63e-10!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.07e-15;41!UBERON:0001890;2.07e-15;41!UBERON:0003528;3.28e-15;34!UBERON:0002020;3.28e-15;34!UBERON:0002791;3.81e-15;32!UBERON:0001869;4.62e-15;32!UBERON:0001893;5.41e-15;34!UBERON:0000073;3.13e-14;53!UBERON:0002616;3.13e-14;53!UBERON:0002619;2.94e-13;22!UBERON:0000956;3.42e-13;25!UBERON:0000203;3.42e-13;25!UBERON:0001950;2.24e-12;20!UBERON:0007023;8.77e-12;114!UBERON:0001016;7.85e-11;83!UBERON:0000955;1.28e-10;68!UBERON:0001017;2.02e-10;75!UBERON:0000922;3.98e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.85e-41,114;UBERON:0001049,1.79e-25,56;UBERON:0005068,1.79e-25,56;UBERON:0006241,1.79e-25,56;UBERON:0007135,1.79e-25,56;UBERON:0001016,1.21e-24,89;UBERON:0001017,5.10e-24,81;UBERON:0000073,8.94e-24,53;UBERON:0002616,8.94e-24,53;UBERON:0000955,5.87e-22,68;UBERON:0006238,5.87e-22,68;UBERON:0002780,5.46e-21,41;UBERON:0001890,5.46e-21,41;UBERON:0003080,5.46e-21,41;UBERON:0006240,5.46e-21,41;UBERON:0002346,6.55e-19,86;UBERON:0003075,1.14e-18,82;UBERON:0007284,1.14e-18,82;UBERON:0003528,9.01e-18,34;UBERON:0002020,9.01e-18,34;UBERON:0001893,2.19e-17,34;UBERON:0002791,1.26e-16,32;UBERON:0001869,1.40e-16,32;UBERON:0003056,7.89e-15,61;UBERON:0002619,3.30e-13,22;UBERON:0000956,3.52e-13,25;UBERON:0000203,3.52e-13,25;UBERON:0001950,2.45e-12,20;UBERON:0011216,2.43e-10,223;UBERON:0010371,3.22e-10,104;UBERON:0004121,2.20e-09,171;UBERON:0000924,2.20e-09,171;UBERON:0006601,2.20e-09,171;UBERON:0010314,4.01e-09,132 | |||
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| ||
|short_description=p1@RFX3 | |||
}} | }} |
Latest revision as of 07:12, 17 September 2015
Short description: | p1@RFX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFX3_5end |
Coexpression cluster: | C4820_cerebellum_parietal_occipital_pineal_duodenum_pituitary_temporal |
Association with transcript: | 0bp_to_ENST00000302303, ENST00000381985, ENST00000381986, ENST00000381992, ENST00000382004, ENST00000449190, NM_002919, NM_134428, uc003zhr.2, uc003zhs.1, uc010mhd.2, uc010mhe.1_5end |
EntrezGene: | RFX3 |
HGNC: | 9984 |
UniProt: | E9PGD7E9PGD6F6UGA0P48380F6XM74Q5JTM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data