FFCP PHASE1:Hg19::chrX:105969893..105969919,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:105969893..105969919,+ to FFCP PHASE1:Hg19::chrX:105969893..105969919,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79589 | |EntrezGene=79589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21153 | |HGNC=21153 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TEB7 | |UniProt=Q8TEB7 | ||
|association_with_transcript=0bp_to_ENST00000255499,NM_194463,uc004eml.2_5end | |||
|cluster_id=chrX:105969893..105969919,+ | |||
|coexpression_cluster_id=C4841 | |||
|description=CAGE_peak_2_at_RNF128_5end | |||
|id=chrX:105969893..105969919,+ | |||
|ontology_enrichment_celltype=CL:0000223!3.22e-12!59;CL:0002076!2.09e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.67e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.23e-13,58;CL:0002076,1.94e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.65e-08;31!CL:0000223;1.13e-07;58!UBERON:0004161;3.12e-07;11!UBERON:0009497;8.40e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.96e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.49e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.61e-16!365;UBERON:0007023!7.43e-16!115;UBERON:0000481!1.28e-15!347;UBERON:0003080!9.85e-14!42;UBERON:0002780!1.27e-13!41;UBERON:0001890!1.27e-13!41;UBERON:0006240!1.27e-13!41;UBERON:0001049!1.37e-13!57;UBERON:0005068!1.37e-13!57;UBERON:0006241!1.37e-13!57;UBERON:0007135!1.37e-13!57;UBERON:0005743!3.83e-13!86;UBERON:0001017!1.73e-12!82;UBERON:0000033!2.32e-12!123;UBERON:0001869!2.53e-12!32;UBERON:0002020!2.56e-12!34;UBERON:0003528!2.56e-12!34;UBERON:0004121!2.67e-12!169;UBERON:0001893!2.76e-12!34;UBERON:0000924!3.45e-12!173;UBERON:0006601!3.45e-12!173;UBERON:0000073!3.94e-12!94;UBERON:0001016!3.94e-12!94;UBERON:0000153!5.23e-12!129;UBERON:0007811!5.23e-12!129;UBERON:0002791!9.26e-12!33;UBERON:0004119!1.65e-11!169;UBERON:0000925!1.65e-11!169;UBERON:0006595!1.65e-11!169;UBERON:0000955!2.83e-11!69;UBERON:0006238!2.83e-11!69;UBERON:0002616!5.43e-11!59;UBERON:0004111!8.22e-11!241;UBERON:0003056!9.44e-11!61;UBERON:0000483!2.64e-10!309;UBERON:0003075!2.73e-10!86;UBERON:0007284!2.73e-10!86;UBERON:0000062!2.91e-10!511;UBERON:0002050!3.43e-10!605;UBERON:0005423!3.43e-10!605;UBERON:0000923!4.54e-10!604;UBERON:0005291!4.54e-10!604;UBERON:0006598!4.54e-10!604;UBERON:0002532!4.54e-10!604;UBERON:0002346!4.90e-10!90;UBERON:0000956!7.25e-10!25;UBERON:0000203!7.25e-10!25;UBERON:0000922!8.71e-10!612;UBERON:0000119!8.92e-10!312;UBERON:0000480!9.63e-10!626;UBERON:0000467!1.27e-09!625;UBERON:0000468!1.59e-09!659;UBERON:0001007!1.73e-09!155;UBERON:0001555!1.73e-09!155;UBERON:0007026!1.73e-09!155;UBERON:0002619!1.83e-09!22;UBERON:0000025!2.29e-09!194;UBERON:0001950!7.82e-09!20;UBERON:0004921!1.44e-08!129;UBERON:0004185!1.44e-08!129;UBERON:0005911!9.05e-08!82;UBERON:0002365!1.18e-07!31;UBERON:0002330!1.18e-07!31;UBERON:0002530!2.15e-07!59;UBERON:0000477!3.86e-07!286;UBERON:0003929!8.30e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.58e-10;32!UBERON:0004921;1.06e-09;33!UBERON:0003528;1.67e-09;34!UBERON:0002020;1.67e-09;34!UBERON:0002365;3.45e-09;31!UBERON:0002330;3.45e-09;31!UBERON:0000956;4.98e-09;25!UBERON:0000203;4.98e-09;25!UBERON:0002791;5.73e-09;32!UBERON:0002619;7.62e-09;22!UBERON:0001950;8.40e-09;20!UBERON:0001893;1.26e-08;34!UBERON:0002780;1.14e-07;41!UBERON:0001890;1.14e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.03e-14,223;UBERON:0007023,2.66e-13,114;UBERON:0001869,6.41e-11,32;UBERON:0002780,8.55e-11,41;UBERON:0001890,8.55e-11,41;UBERON:0003080,8.55e-11,41;UBERON:0006240,8.55e-11,41;UBERON:0003528,1.27e-10,34;UBERON:0002020,1.27e-10,34;UBERON:0000073,5.47e-10,53;UBERON:0002616,5.47e-10,53;UBERON:0001893,7.31e-10,34;UBERON:0002791,9.87e-10,32;UBERON:0001049,1.03e-09,56;UBERON:0005068,1.03e-09,56;UBERON:0006241,1.03e-09,56;UBERON:0007135,1.03e-09,56;UBERON:0004119,1.71e-09,160;UBERON:0000925,1.71e-09,160;UBERON:0006595,1.71e-09,160;UBERON:0002365,3.06e-09,31;UBERON:0002330,3.06e-09,31;UBERON:0000956,4.17e-09,25;UBERON:0000203,4.17e-09,25;UBERON:0002619,6.94e-09,22;UBERON:0001950,7.36e-09,20;UBERON:0001017,7.58e-09,81;UBERON:0000955,2.93e-08,68;UBERON:0006238,2.93e-08,68;UBERON:0004121,5.89e-08,171;UBERON:0000924,5.89e-08,171;UBERON:0006601,5.89e-08,171;UBERON:0001016,6.44e-08,89;UBERON:0004921,1.68e-07,118;UBERON:0010371,2.50e-07,104;UBERON:0002530,2.55e-07,59;UBERON:0001007,2.67e-07,145;UBERON:0001555,2.67e-07,145;UBERON:0007026,2.67e-07,145;UBERON:0003056,5.14e-07,61 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,0,0,0,0,0.631719873426831,0,0.982935746006035,0.697801167972428,0.436882744260345,0,0,0,0,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,1.14494394852423,1.91624195102038,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.472674085820339,0.443458794925128,0.43917392846563,2.0956652079634,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,1.01304409331664,2.51577443545116,1.72101972449288,3.19201543978521,1.12135520028461,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0.936480230490962,0,0.896692083310806,0,0,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.340296549480063,0,0,0.211931901159562,1.20036438433761,0.412210116953756,0,0.18611685633159,2.36286865137773,0.876933046450788,0,0.184099797284599,0.161646056818812,0.355009592516614,0.403008392910561,0,0.57978255948989,1.63647672354501,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,21.5483559197112,19.6565443335525,11.8157981336281,0,7.99424850530238,0.686271241194102,4.39001141634502,2.24803506515239,2.6137532827024,2.22212268380471,0,0,0,1.507095264676,0,0,0,0,0,0,0,1.40402559083543,0.743155811443641,1.87467667973554,4.87148171776693,0.708875486211932,2.68675568108545,1.45316969256981,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0.253991577168676,2.29193055334967,1.17217447210047,0,1.23392991243988,3.30377363628309,1.14330573052231,0,0,0,1.68053230485111,0,2.535908257668,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0,0,26.8281045583032,13.9445353376047,18.5949763598626,0,0,0,0,0,1.42636905040718,0.579125226670317,0.410952645100767,0.895304816199478,0,0,0,0,9.90969034467607,2.60279707715243,1.54657762555539,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,1.32845119707087,1.47495334833363,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,0.280660094433074,0.384417447767103,0,0.321707842287215,0,1.85051632563187,1.42049380250502,2.46381468041427,0,1.27831416305955,5.07609688284813,5.01266175758212,6.44566922551274,0,0,0.262248829918848,0,1.15523005656622,0.784349769176855,2.92278449306521,1.26661954671451,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0,0,1.02580050046556,2.62411716559765,4.55529752530024,14.4257416306811,0,0,0,3.90036147621913,0,0.193341436584244,0,0,0.137836572484531,0,0,0.170453254832202,0,5.61968712227326,3.0750410778417,2.4246415373971,3.8439956725109,0.464845549297286,6.61105928344344,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0.606547444719948,0,0,0,0.974853958525138,0,0,0.424216295861138,1.13008116620243,1.65409603063837,0,0.438450885253763,0,0,0.405820753925408,0,0,1.43411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0,2.4055528181378,0,3.26672954583968,12.6152693040884,5.16606447205476,1.68471475667626,1.33029046061003,15.3914678138663,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5269135004138,1.17206543417515,0,0,1.42068073403207,1.90995587790152,0.593929361665277,2.15012491469462,0.994147647766298,1.26602474769461,4.00711338082461,0,0,0.19924798825107,1.10513566212459,10.3292426620253,17.9992881203792,0,0,1.52776196950456,0,0,1.38100767891707,0,0,2.90799823828566,2.59750674853184,1.99613798001194,0,7.52155999967283,0.724999575434793,7.96554137998498,0.254253650292766,0.236387681767936,0.689486746482929,2.62444152044929,0,0.885741385813839,3.13550740426061,0,0.331737779793674,0.591095237907095,2.63262476584767,0,0.557694977114413,0.230850775511391,0,14.7560898808358,14.9895266164319,2.7161842980502,1.27600463892768,0.824378340616761,0,0,0,0,0,0,0,0,0,0.210998064528027,0,7.35035971456492,13.1997070242676,5.97157158647103,8.66884132132724,10.9985426088053,0,0,0,0.808813595768125,0,1.63985112007737,0,1.56531695145672,0,0.394584402849391,7.25944296291983,0.61214552326098,0.063186579628488,1.65355761355942,3.83646308169814,0,0.330991955875499,0,0,1.42304773014896,0,0,2.74378712760257,0,1.39781334593624,0,0,0,0,3.4916045935831,0,0,0.274083849293502,0,3.35547218566157,0.391102765469606,1.84365286578528,13.4475386685792,0,4.46680293177729,0.114536596165916,15.1003598118529,0,0,0.235694034616795,0,0,0,0.577901179803038,1.20084057741958,0.410716136675979,0,0.859530882839914,0,0,0,0,2.59582700648688,0,0,0.0671834724867263,0,1.16495949527454,8.35101732456571,8.48883341326014,7.48179336781452,6.10250385391442,0,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| ||
|short_description=p2@RNF128 | |||
}} | }} |
Latest revision as of 22:11, 18 September 2015
Short description: | p2@RNF128 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF128_5end |
Coexpression cluster: | C4841_Mesothelial_gastrointestinal_Hepatocyte_oral_small_signet_liver |
Association with transcript: | 0bp_to_ENST00000255499, NM_194463, uc004eml.2_5end |
EntrezGene: | RNF128 |
HGNC: | 21153 |
UniProt: | Q8TEB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.23e-13 | 58 |
endo-epithelial cell | 1.94e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.49e-08 | 14 |