FFCP PHASE1:Mm9::chr11:48900524..48900554,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:48900524..48900554,+ to FFCP PHASE1:Mm9::chr11:48900524..48900554,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15953,18356 | |EntrezGene=15953,18356 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1967 | |||
|TSSclassifier=NA | |||
|UniProt=Q61635,Q8VGD6 | |UniProt=Q61635,Q8VGD6 | ||
|association_with_transcript=0bp_to_ENSMUST00000046704,uc007ipq.1,uc011xua.1_5end | |||
|cluster_id=chr11:48900524..48900554,+ | |||
|description=CAGE_peak_1_at_Ifi47_5end,CAGE_peak_1_at_Olfr56_5end | |||
|id=chr11:48900524..48900554,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.17e-10!66;CL:0002320!1.55e-10!46;CL:0000134!1.55e-10!46;CL:0000838!1.55e-08!12;CL:0000084!3.12e-08!11;CL:0000827!3.12e-08!11;CL:0002031!4.97e-08!25;CL:0000219!8.52e-08!54;CL:0000988!9.35e-08!32;CL:0002032!9.35e-08!32;CL:0000037!9.35e-08!32;CL:0000566!9.35e-08!32;CL:0000837!9.35e-08!32;CL:0000738!1.68e-07!17;CL:0002087!1.68e-07!17;CL:0000791!3.09e-07!9;CL:0000789!3.09e-07!9;CL:0002420!3.09e-07!9;CL:0002419!3.09e-07!9;CL:0000790!3.09e-07!9;CL:0000542!4.83e-07!13;CL:0000051!4.83e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.70e-11,46;CL:0000134,4.70e-11,46;CL:0000838,1.02e-08,12;CL:0000084,2.08e-08,11;CL:0000827,2.08e-08,11;CL:0002031,2.32e-08,25;CL:0000988,3.38e-08,32;CL:0002032,3.38e-08,32;CL:0000037,3.38e-08,32;CL:0000837,3.38e-08,32;CL:0000219,5.51e-08,54;CL:0000738,7.76e-08,17;CL:0002087,7.76e-08,17;CL:0000791,2.19e-07,9;CL:0000789,2.19e-07,9;CL:0002420,2.19e-07,9;CL:0002419,2.19e-07,9;CL:0000790,2.19e-07,9;CL:0000542,2.19e-07,13;CL:0000051,2.19e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.68e-20!70;UBERON:0004119!6.50e-18!130;UBERON:0000925!6.50e-18!130;UBERON:0006595!6.50e-18!130;UBERON:0001007!1.80e-17!128;UBERON:0001555!1.80e-17!128;UBERON:0007026!1.80e-17!128;UBERON:0004921!9.81e-17!126;UBERON:0004185!9.81e-17!126;UBERON:0002193!1.07e-15!48;UBERON:0002390!2.21e-14!45;UBERON:0003061!2.21e-14!45;UBERON:0005057!4.10e-14!51;UBERON:0003929!1.04e-13!55;UBERON:0000490!4.90e-13!66;UBERON:0005911!6.24e-13!69;UBERON:0002384!1.55e-10!46;UBERON:0000077!3.88e-10!97;UBERON:0004177!4.19e-10!29;UBERON:0001041!7.69e-10!92;UBERON:0003104!1.07e-08!131;UBERON:0009142!1.07e-08!131;UBERON:0002530!1.19e-08!65;UBERON:0002370!1.50e-08!23;UBERON:0000974!1.50e-08!23;UBERON:0004807!1.50e-08!23;UBERON:0005058!1.50e-08!23;UBERON:0003351!1.50e-08!23;UBERON:0009113!1.50e-08!23;UBERON:0003295!1.50e-08!23;UBERON:0009722!1.50e-08!23;UBERON:0005562!1.50e-08!23;UBERON:0007690!1.50e-08!23;UBERON:0003408!1.57e-08!24;UBERON:0006562!2.51e-08!24;UBERON:0001557!2.51e-08!24;UBERON:0001042!2.51e-08!24;UBERON:0008814!2.51e-08!24;UBERON:0009145!2.51e-08!24;UBERON:0002368!5.69e-08!60;UBERON:0000926!9.02e-08!193;UBERON:0004120!9.02e-08!193;UBERON:0006603!9.02e-08!193;UBERON:0003081!9.99e-08!88;UBERON:0000072!1.00e-07!27;UBERON:0004923!1.80e-07!24;UBERON:0001004!6.79e-07!42;UBERON:0000065!7.81e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.60e-20,118;UBERON:0000925,9.60e-20,118;UBERON:0006595,9.60e-20,118;UBERON:0001007,2.70e-19,116;UBERON:0001555,2.70e-19,116;UBERON:0007026,2.70e-19,116;UBERON:0004921,1.61e-18,114;UBERON:0002193,3.07e-16,48;UBERON:0002405,3.07e-16,48;UBERON:0002390,6.94e-15,45;UBERON:0003061,6.94e-15,45;UBERON:0003929,8.09e-14,55;UBERON:0000490,3.63e-13,66;UBERON:0005911,4.76e-13,69;UBERON:0001041,2.65e-11,80;UBERON:0002384,4.70e-11,46;UBERON:0000077,8.37e-11,35;UBERON:0004177,1.71e-10,29;UBERON:0005057,1.71e-10,29;UBERON:0002370,6.67e-09,23;UBERON:0000974,6.67e-09,23;UBERON:0004807,6.67e-09,23;UBERON:0005058,6.67e-09,23;UBERON:0003351,6.67e-09,23;UBERON:0009113,6.67e-09,23;UBERON:0003295,6.67e-09,23;UBERON:0009722,6.67e-09,23;UBERON:0005562,6.67e-09,23;UBERON:0007690,6.67e-09,23;UBERON:0003408,7.05e-09,24;UBERON:0006562,1.14e-08,24;UBERON:0001557,1.14e-08,24;UBERON:0001042,1.14e-08,24;UBERON:0008814,1.14e-08,24;UBERON:0009145,1.14e-08,24;UBERON:0002530,3.50e-08,65;UBERON:0000072,4.90e-08,27;UBERON:0004923,1.26e-07,24;UBERON:0002368,1.70e-07,60;UBERON:0001004,3.76e-07,42;UBERON:0000065,4.34e-07,41;UBERON:0003081,4.48e-07,87 | |||
|phase1_expression=0.160148847104794,15.7038933437712,11.3749809847384,17.2404600444893,18.0322462780685,7.21880869221126,12.3814699515629,384.400133885573,231.315870495188,265.429172849141,55.6458396732891,67.7265629870406,373.902394169753,390.59435800808,27.3150004688843,39.4826771410161,11.1929900500503,137.85696626155,103.795626239544,78.9364752344336,18.4543939627821,52.7234950876701,67.3895455978453,24.4788406873912,35.3290292843442,24.1177424928308,30.5841017272943,23.0554218973901,73.5390633296167,114.673709040768,54.7674361318603,0,0.61506478758457,0,27.4409038763711,30.9196440366796,27.9712018079446,10.8818223991596,14.8453715459522,15.7057123192139,11.1763982725893,8.87959130445979,16.0218416500281,46.7077194689392,37.9149722760984,25.8800920547971,5.47673941043627,0.436050312760893,0.659058548203415,1.55543919259427,7.27929392451885,0,36.0732603024133,128.389099136008,161.661117387525,2.05807548828758,1.71920063963254,3.6097046459421,0,0,0,1.0165335962074,15.1180115338894,18.8978940629094,37.576921777545,27.7087244828979,7.78960287347852,1.53687322128622,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,1.06958773443767,0,0.284743361598206,0,2.49896437999507,0.755715601067855,117.684982412881,89.4840832060642,8.83962733820076,26.445456390253,44.8345728038892,29.5697745484241,21.487996280158,13.6344258062446,12.2099422163348,7.0667914902068,0.281686839553361,10.2661181931454,2.54805239706646,0,3.89683873820185,4.30711771307668,3.53867111510348,24.0927986207217,206.114555383149,19.1490359393624,0.346970653532272,0.913396434936424,1.84492397804847,9.04335843315735,4.9387256996996,6.03199638382442,28.6746162571874,22.4129003225863,27.4229271104461,2.10296904931632,10.6003928860989,11.6370060752453,20.5030937339934,1.17112318804619,0.41889341362691,94.7745674823874,12.5805880731216,14.9975682748352,15.8837783841331,1.3481157546434,2.28750301409313,0.251308704225729,0.869121600961382,0.767146371990992,1.24672826735736,0.811206315338788,2.13862664085664,11.8186622079588,13.6470289554184,8.62811609134543,0,0,0.180062129805349,0.90422890701429,1.02054748726992,1.0249097622788,1.03071897015702,2.84573707812917,0,0.189106080167819,0,0.657587197282725,0.556094498451196,0.696504333044333,1.64625709126355,0.199034266818493,15.4486901208912,16.4702660553418,6.53576048609863,0.207125772535502,0.469052119962192,0,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.804820204198858,1.16765342367169,0.987359099480883,1.97000956894914,2.35099547682982,3.50879969820798,10.3188554186794,3.75777972529041,0.630869845692382,0.720332286654991,110.690292299572,48.3944536994286,0,0,0.77320476793256,1.4117846723634,4.66993892074228,18.0714344806931,29.8953308773042,23.3872515708095,41.2189742432442,52.723465090905,46.7913809085888,53.0303451105991,35.2305021295752,22.9012464242522,0.569003702859245,0.342745537829186,1.1270773567308,0.814605311381257,2.32742984601151,1.26244475802573,2.02356918797623,6.4948465111025,5.96595165797224,4.68909222902842,27.866546946192,0.83422552858047,0.589676985339609,1.79889689907883,2.63718157805054,2.65294875727659,17.569183772918,38.2635862809578,11.8358715545776,48.0482473079143,104.950790764969,112.758707143557,78.6334936248693,42.1806726171677,46.1051352751314,23.639732546805,100.320982260466,0.189491411770485,0,0.678980343100753,0.234690248288502,2.01007508930179,10.4739201989846,6.82967767502296,9.45810864637146,17.9386398615508,13.7131101045439,43.9153683438178,45.4161502307305,42.6714722815459,132.69632986656,291.533446526828,39.3411418415229,66.5007558594405,3.85321415970701,0.35163505977661,0.327869890753351,3.7870639080656,0,0,0,0,0.445597348164788,0.283076530788832,0,0.584511715822624,0.395287777946524,1.92792789853084,12.2068473279111,4.80777129901589,2.44330439030364,26.0652794296606,6.63725691699814,0,0,0.754420319023592,0.885905678642318,5.22639751504677,13.9551278310839,5.45300594216258,3.56497378384721,8.53299246426703,9.48767477174989,6.18813259489121,9.87274856685985,0,0.258717367565509,0.857348140126369,0.532020700926821,0.891844088010353,1.15184314421485,2.74018454203139,12.6722722354404,15.6755732439227,1.54369878638473,9.23363016472288,2.9063596805263,1.74907482291652,3.10368094408155,1.31312719796049,40.2243554549194,1.66882771809459,61.0009044448334,3.09580301944834,17.5934801001226,26.9366893516708,54.540996860689,45.7556346413045,9.85874893964361,13.5752908753948,12.9907975376158,7.63736494412091,0.158167996790568,1.42323626988794,0.756037385752609,0.627264888043406,8.7345025498471,6.20375993370175,12.3153649030751,4.71160695571253,20.2199358335197,9.94142900939081,1.12738587736838,0.299033092087958,0.827292452285488,0.388902376688095,1.03327858782185,3.21016638432478,1.64300134104056,3.51551839078665,1.04859344425711,0.724752362478018,1.15212002503146,96.6994029122225,11.149886840959,16.1256202748779,31.5707599836042,20.9461233930953,31.1929727006586,49.760916101267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| ||
|short_description=p1@Ifi47,p1@Olfr56 | |||
}} | }} |
Latest revision as of 14:17, 1 October 2015
Short description: | p1@Ifi47, p1@Olfr56 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ifi47_5end, CAGE_peak_1_at_Olfr56_5end |
Coexpression cluster: | MCL_coexpression_mm9:1967 |
Association with transcript: | 0bp_to_ENSMUST00000046704, uc007ipq.1, uc011xua.1_5end |
EntrezGene: | 15953,18356 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 4.70e-11 | 46 |
mesenchymal cell | 4.70e-11 | 46 |
lymphoid lineage restricted progenitor cell | 1.02e-08 | 12 |
T cell | 2.08e-08 | 11 |
pro-T cell | 2.08e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 2.32e-08 | 25 |
hematopoietic cell | 3.38e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.38e-08 | 32 |
hematopoietic stem cell | 3.38e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.38e-08 | 32 |
motile cell | 5.51e-08 | 54 |
leukocyte | 7.76e-08 | 17 |
nongranular leukocyte | 7.76e-08 | 17 |
mature alpha-beta T cell | 2.19e-07 | 9 |
alpha-beta T cell | 2.19e-07 | 9 |
immature T cell | 2.19e-07 | 9 |
mature T cell | 2.19e-07 | 9 |
immature alpha-beta T cell | 2.19e-07 | 9 |
lymphocyte | 2.19e-07 | 13 |
common lymphoid progenitor | 2.19e-07 | 13 |