FFCP PHASE1:Mm9::chr11:77908169..77908180,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:77908169..77908180,+ to FFCP PHASE1:Mm9::chr11:77908169..77908180,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=216971 | |EntrezGene=216971 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3V2W6,Q6P539 | |UniProt=Q3V2W6,Q6P539 | ||
|association_with_transcript=0bp_to_NM_145430,uc007kic.2,uc007kid.2_5end | |||
|cluster_id=chr11:77908169..77908180,+ | |||
|description=CAGE_peak_2_at_BC017647_5end | |||
|id=chr11:77908169..77908180,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.24e-15!75;UBERON:0001016!1.24e-15!75;UBERON:0001017!3.69e-15!73;UBERON:0005743!3.69e-15!73;UBERON:0001049!6.59e-15!52;UBERON:0005068!6.59e-15!52;UBERON:0006241!6.59e-15!52;UBERON:0007135!6.59e-15!52;UBERON:0000025!6.68e-14!114;UBERON:0000955!8.16e-14!50;UBERON:0006238!8.16e-14!50;UBERON:0004111!2.52e-13!122;UBERON:0002616!3.58e-13!49;UBERON:0004121!1.12e-11!102;UBERON:0000924!1.12e-11!102;UBERON:0006601!1.12e-11!102;UBERON:0000033!3.52e-11!63;UBERON:0002020!4.47e-11!34;UBERON:0002346!5.22e-11!71;UBERON:0003075!5.22e-11!71;UBERON:0007284!5.22e-11!71;UBERON:0003080!5.30e-11!40;UBERON:0002780!2.01e-10!39;UBERON:0001890!2.01e-10!39;UBERON:0006240!2.01e-10!39;UBERON:0002791!3.60e-10!29;UBERON:0003528!3.60e-10!29;UBERON:0001893!3.60e-10!29;UBERON:0000477!7.13e-10!154;UBERON:0003056!1.95e-09!49;UBERON:0007811!7.39e-09!86;UBERON:0000153!3.70e-08!94;UBERON:0000483!2.76e-07!181;UBERON:0000119!4.29e-07!183;UBERON:0000956!6.15e-07!21;UBERON:0001869!6.15e-07!21;UBERON:0000203!6.15e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.68e-16,75;UBERON:0001017,2.60e-15,73;UBERON:0001049,5.32e-15,52;UBERON:0005068,5.32e-15,52;UBERON:0006241,5.32e-15,52;UBERON:0007135,5.32e-15,52;UBERON:0000073,2.15e-14,54;UBERON:0000955,5.09e-14,47;UBERON:0006238,5.09e-14,47;UBERON:0000025,5.49e-14,114;UBERON:0004111,2.09e-13,122;UBERON:0002616,2.30e-13,46;UBERON:0004121,2.83e-12,95;UBERON:0000924,2.83e-12,95;UBERON:0006601,2.83e-12,95;UBERON:0002346,7.17e-12,64;UBERON:0003075,7.17e-12,64;UBERON:0007284,7.17e-12,64;UBERON:0002020,3.63e-11,34;UBERON:0003080,4.37e-11,40;UBERON:0010314,1.57e-10,92;UBERON:0002780,1.66e-10,39;UBERON:0001890,1.66e-10,39;UBERON:0006240,1.66e-10,39;UBERON:0003528,2.92e-10,29;UBERON:0002791,2.92e-10,29;UBERON:0001893,2.92e-10,29;UBERON:0003056,1.66e-09,49;UBERON:0010371,4.45e-09,73;UBERON:0000483,2.61e-07,174;UBERON:0000119,3.80e-07,176;UBERON:0000956,5.10e-07,21;UBERON:0001869,5.10e-07,21;UBERON:0000203,5.10e-07,21 | |||
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| ||
|short_description=p2@BC017647 | |||
}} | }} |
Latest revision as of 17:41, 25 September 2015
Short description: | p2@BC017647 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BC017647_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_145430, uc007kic.2, uc007kid.2_5end |
EntrezGene: | BC017647 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 8.68e-16 | 75 |
central nervous system | 2.60e-15 | 73 |
neural tube | 5.32e-15 | 52 |
neural rod | 5.32e-15 | 52 |
future spinal cord | 5.32e-15 | 52 |
neural keel | 5.32e-15 | 52 |
regional part of nervous system | 2.15e-14 | 54 |
brain | 5.09e-14 | 47 |
future brain | 5.09e-14 | 47 |
tube | 5.49e-14 | 114 |
anatomical conduit | 2.09e-13 | 122 |
regional part of brain | 2.30e-13 | 46 |
ectoderm-derived structure | 2.83e-12 | 95 |
ectoderm | 2.83e-12 | 95 |
presumptive ectoderm | 2.83e-12 | 95 |
neurectoderm | 7.17e-12 | 64 |
neural plate | 7.17e-12 | 64 |
presumptive neural plate | 7.17e-12 | 64 |
gray matter | 3.63e-11 | 34 |
anterior neural tube | 4.37e-11 | 40 |
structure with developmental contribution from neural crest | 1.57e-10 | 92 |
regional part of forebrain | 1.66e-10 | 39 |
forebrain | 1.66e-10 | 39 |
future forebrain | 1.66e-10 | 39 |
brain grey matter | 2.92e-10 | 29 |
regional part of telencephalon | 2.92e-10 | 29 |
telencephalon | 2.92e-10 | 29 |
pre-chordal neural plate | 1.66e-09 | 49 |
ecto-epithelium | 4.45e-09 | 73 |
epithelium | 2.61e-07 | 174 |
cell layer | 3.80e-07 | 176 |
cerebral cortex | 5.10e-07 | 21 |
cerebral hemisphere | 5.10e-07 | 21 |
pallium | 5.10e-07 | 21 |