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(Created page with "{{f5samples |id=FF:11876-125C4 |name=CD14+ monocytes - treated with Salmonella, donor2 |sample_id=11876 |rna_tube_id= |rna_box=125 |rna_position=C4 |sample_cell_lot= |...")
 
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{{f5samples
{{f5samples
|id=FF:11876-125C4
|DRA_sample_Accession=CAGE@SAMD00004857
|name=CD14+ monocytes - treated with Salmonella, donor2
|accession_numbers=CAGE;DRX008154;DRR009026;DRZ000451;DRZ001836;DRZ011801;DRZ013186
|sample_id=11876
|ancestors_in_anatomy_facet=
|rna_tube_id=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057
|rna_box=125
|rna_position=C4
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=D4-7
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=donor2
|sample_sex=male
|sample_age=51
|sample_ethnicity=
|rna_rin=8.90000
|rna_od260/230=1.41000
|rna_od260/280=2.03000
|sample_cell_type=monocyte
|sample_cell_line=
|sample_collaboration=Christine Wells (University of Queensland)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=3.53232
|rna_concentration=0.78496
|sample_note=
|profile_hcage=CNhs13485,,,SEQUENCING QUEUE
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000633,FF:0011109
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.59!3914.96!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.96!914.06!SPI1;;chr7:115670804..115670825,-!p1@TFEC!2.84!684.83!TFEC;;chr16:85932760..85932775,+!p1@IRF8!2.62!417.03!IRF8;;chr21:34442439..34442455,+!p1@OLIG1!2.30!197.45!OLIG1;;chr11:47400062..47400077,-!p2@SPI1!2.27!187.24!SPI1;;chr10:64018918..64018936,+!p2@ZNF365!2.24!171.92!ZNF365;;chr2:192015701..192015743,-!p1@STAT4!2.17!199.15!STAT4;;chr14:35873947..35873965,-!p1@NFKBIA!2.10!7265.94!NFKBIA;;chr12:72056800..72056834,+!p1@THAP2!2.10!165.11!THAP2;;chr12:54778471..54778528,-!p1@ZNF385A!2.10!124.26!ZNF385A;;chr12:72056749..72056767,+!p6@THAP2!2.09!136.17!THAP2;;chr2:70142232..70142251,+!p1@MXD1!2.08!640.01!MXD1;;chr11:47399947..47399961,-!p3@SPI1!2.08!120.29!SPI1;;chr14:35872453..35872485,-!p2@NFKBIA!2.07!279.15!NFKBIA;;chr3:101546827..101546847,+!p2@NFKBIZ!2.06!157.73!NFKBIZ;;chr2:61108695..61108753,+!p1@REL!2.05!721.71!REL;;chr4:103422499..103422632,+!p1@NFKB1!2.03!2056.20!NFKB1;;chr20:39317868..39317884,-!p1@MAFB!2.02!1155.20!MAFB;;chr10:51572408..51572454,+!p3@NCOA4!1.95!489.09!NCOA4;;chr2:145275162..145275202,-!p2@ZEB2!1.94!476.04!ZEB2;;chr6:106534192..106534224,+!p1@PRDM1!1.94!233.20!PRDM1;;chr2:68592394..68592405,+!p2@PLEK!1.94!85.11!PLEK;;chr10:64576105..64576133,-!p1@EGR2!1.93!167.95!EGR2;;chr10:31288398..31288455,-!p2@ZNF438!1.92!95.89!ZNF438;;chr10:104155480..104155534,+!p2@NFKB2!1.91!491.36!NFKB2;;chr10:104155659..104155676,+!p4@NFKB2!1.91!99.86!NFKB2;;chr11:47400032..47400043,-!p5@SPI1!1.91!79.43!SPI1;;chr12:72056773..72056796,+!p3@THAP2!1.86!91.35!THAP2;;chr3:101568349..101568365,+!p1@NFKBIZ!1.85!3423.04!NFKBIZ;;chr19:50432132..50432217,+!p2@ATF5!1.84!80.00!ATF5;;chr11:47399996..47400014,-!p4@SPI1!1.84!67.52!SPI1;;chr18:77155922..77155939,+!p1@NFATC1!1.83!176.46!NFATC1;;chr8:123793988..123794016,+!p1@ZHX2!1.83!115.75!ZHX2;;chr21:30671690..30671762,+!p2@BACH1!1.81!208.80!BACH1;;chr9:102584159..102584174,+!p2@NR4A3!1.81!112.34!NR4A3;;chr10:35484053..35484076,+!p1@CREM!1.80!150.92!CREM;;chr1:38325227..38325246,-!p2@MTF1!1.80!82.84!MTF1;;chr2:61108808..61108821,+!p3@REL!1.77!72.63!REL;;chr16:31885093..31885165,+!p1@ZNF267!1.76!819.30!ZNF267;;chr10:51572339..51572376,+!p4@NCOA4!1.76!124.82!NCOA4;;chr10:31288370..31288393,-!p3@ZNF438!1.75!55.60!ZNF438;;chr1:37940170..37940190,+!p1@ZC3H12A!1.74!628.10!ZC3H12A;;chr10:104154246..104154347,+!p3@NFKB2!1.73!304.69!NFKB2;;chr11:65430554..65430579,-!p3@RELA!1.73!128.80!RELA;;chr22:38597987..38598021,+!p2@MAFF!1.72!296.18!MAFF;;chrX:153305787..153305807,-!p3@MECP2!1.72!51.63!MECP2;;chr9:102584262..102584276,+!p1@NR4A3!1.68!101.56!NR4A3;;chr9:102584128..102584144,+!p3@NR4A3!1.68!87.38!NR4A3;;chr11:47400045..47400060,-!p6@SPI1!1.67!45.96!SPI1;;chr2:68615063..68615089,+!p4@PLEK!1.66!44.26!PLEK;;chr5:142782823..142782854,-!p3@NR3C1!1.65!61.28!NR3C1;;chr21:30673091..30673135,+!p7@BACH1!1.64!42.55!BACH1;;chr2:145277640..145277771,-!p1@ZEB2!1.63!533.91!ZEB2;;chr21:30671235..30671253,+!p1@BACH1!1.63!500.43!BACH1;;chr6:12012170..12012245,+!p1@HIVEP1!1.63!202.56!HIVEP1;;chr6:12011943..12012015,+!p2@HIVEP1!1.63!128.80!HIVEP1;;chr7:50344289..50344323,+!p1@IKZF1!1.63!41.99!IKZF1;;chr6:106534230..106534254,+!p2@PRDM1!1.62!98.73!PRDM1;;chr11:615942..615957,-!p1@IRF7!1.61!361.42!IRF7;;chr19:36391434..36391450,-!p1@NFKBID!1.61!76.03!NFKBID;;chr1:157108130..157108173,-!p1@ETV3!1.59!261.56!ETV3;;chr6:144385698..144385742,-!p2@PLAGL1!1.59!45.39!PLAGL1;;chr7:17338266..17338282,+!p1@AHR!1.58!379.01!AHR;;chr4:81104895..81104920,+!p2@PRDM8!1.56!52.20!PRDM8;;chr21:40177845..40177863,+!p1@ETS2!1.53!1865.00!ETS2;;chr6:44233252..44233296,-!p1@NFKBIE!1.53!306.96!NFKBIE;;chr6:15246200..15246214,+!p2@JARID2!1.52!86.24!JARID2;;chr4:103423079..103423112,+!p4@NFKB1!1.52!31.77!NFKB1;;chr17:40440225..40440268,+!p3@STAT5A!1.50!38.58!STAT5A;;chr7:115670792..115670797,-!p2@TFEC!1.50!30.64!TFEC;;chrX:129244454..129244488,-!p1@ELF4!1.49!208.23!ELF4;;chr14:35872962..35873025,-!p3@NFKBIA!1.49!73.19!NFKBIA;;chr6:12012249..12012266,+!p5@HIVEP1!1.49!51.63!HIVEP1;;chr19:19496539..19496576,+!p8@GATAD2A!1.49!51.06!GATAD2A;;chr21:36260295..36260310,-!p3@RUNX1!1.49!47.09!RUNX1;;chr14:35872926..35872951,-!p4@NFKBIA!1.49!41.99!NFKBIA;;chr19:45252008..45252024,+!p2@BCL3!1.47!91.35!BCL3;;chr12:48298765..48298783,-!p2@VDR!1.47!58.44!VDR;;chr19:45971246..45971265,+!p1@FOSB!1.45!482.28!FOSB;;chr11:65430535..65430549,-!p4@RELA!1.45!31.77!RELA;;chr4:103446567..103446592,+!p15@NFKB1!1.45!27.23!NFKB1;;chr8:22550982..22550999,-!p1@EGR3!1.43!70.92!EGR3;;chr2:68615031..68615055,+!p3@PLEK!1.43!26.10!PLEK;;chr1:212782094..212782109,+!p1@ATF3!1.42!661.57!ATF3;;chr8:81397820..81397836,+!p2@ZBTB10!1.42!31.21!ZBTB10;;chr6:391743..391759,+!p1@IRF4!1.42!25.53!IRF4;;chr8:72755203..72755239,-!p10@MSC!1.42!25.53!MSC;;chr9:129567282..129567353,+!p1@ZBTB43!1.41!312.63!ZBTB43;;chr20:48599506..48599526,+!p1@SNAI1!1.41!152.06!SNAI1;;chr17:38497662..38497713,+!p4@RARA!1.41!28.37!RARA;;chr21:30672433..30672464,+!p6@BACH1!1.41!24.96!BACH1;;chr20:48807351..48807384,+!p1@CEBPB!1.40!2370.54!CEBPB;;chr3:12329397..12329433,+!p2@PPARG!1.40!53.90!PPARG;;chr3:37217736..37217753,-!p2@LRRFIP2!1.39!95.89!LRRFIP2;;chr2:185463247..185463263,+!p1@ZNF804A!1.39!41.42!ZNF804A;;chr4:103446513..103446530,+!p19@NFKB1!1.39!23.83!NFKB1;;chr3:170075436..170075520,+!p1@SKIL!1.38!478.31!SKIL;;chr13:41593425..41593480,-!p1@ELF1!1.38!141.28!ELF1;;chr14:64970670..64970712,-!p3@ZBTB25!1.38!49.36!ZBTB25;;chr7:17338324..17338341,+!p3@AHR!1.37!74.33!AHR;;chr1:221052776..221052799,+!p1@HLX!1.37!40.28!HLX;;chr2:61108771..61108789,+!p4@REL!1.36!32.91!REL;;chr8:72756637..72756664,-!p3@MSC!1.36!24.96!MSC;;chr14:35872414..35872425,-!p7@NFKBIA!1.36!24.40!NFKBIA;;chr14:35872494..35872511,-!p5@NFKBIA!1.35!28.37!NFKBIA;;chr11:47399920..47399931,-!p7@SPI1!1.35!21.56!SPI1;;chr12:72056706..72056717,+!p10@THAP2!1.35!21.56!THAP2;;chr3:39195037..39195069,-!p2@CSRNP1!1.34!124.82!CSRNP1;;chr6:143266297..143266356,-!p1@HIVEP2!1.34!99.29!HIVEP2;;chr19:45250948..45250998,+!p3@BCL3!1.34!51.63!BCL3;;chr16:69599899..69599919,+!p2@NFAT5!1.33!222.98!NFAT5;;chr12:11802753..11802834,+!p2@ETV6!1.33!98.16!ETV6;;chr17:40440359..40440386,+!p4@STAT5A!1.33!20.43!STAT5A;;chr4:106068026..106068084,+!p1@TET2!1.32!175.32!TET2;;chr1:38325256..38325280,-!p1@MTF1!1.31!117.45!MTF1;;chr4:81104865..81104886,+!p6@PRDM8!1.31!20.99!PRDM8;;chr14:35872542..35872553,-!p10@NFKBIA!1.31!19.29!NFKBIA;;chr10:104155455..104155479,+!p1@NFKB2!1.30!266.10!NFKB2;;chr1:120190786..120190915,-!p1@ZNF697!1.30!135.04!ZNF697;;chr2:97202480..97202499,+!p1@ARID5A!1.29!184.40!ARID5A;;chr12:96588219..96588263,+!p2@ELK3!1.28!127.66!ELK3;;chr8:80679993..80680011,-!p1@HEY1!1.28!26.10!HEY1;;chr2:238600998..238601013,+!p5@LRRFIP1!1.28!18.16!LRRFIP1;;chr10:3827371..3827386,-!p2@KLF6!1.27!143.55!KLF6;;chr2:238600933..238600985,+!p3@LRRFIP1!1.27!94.19!LRRFIP1;;chr2:145277882..145277967,-!p3@ZEB2!1.27!30.07!ZEB2;;chr11:34642612..34642646,+!p1@EHF!1.27!17.59!EHF;;chr19:45251395..45251432,+!p8@BCL3!1.27!17.59!BCL3;;chr21:40177892..40177903,+!p2@ETS2!1.26!68.65!ETS2;;chr1:25256756..25256774,-!p1@RUNX3!1.26!32.34!RUNX3;;chr1:221052733..221052749,+!p2@HLX!1.26!22.13!HLX;;chr8:81397846..81397860,+!p3@ZBTB10!1.26!21.56!ZBTB10;;chr18:3449618..3449634,+!p13@TGIF1!1.26!20.99!TGIF1;;chr11:65430586..65430593,-!p5@RELA!1.26!19.29!RELA;;chrX:153305741..153305753,-!p4@MECP2!1.26!17.02!MECP2;;chr7:106809470..106809481,+!p2@HBP1!1.25!23.26!HBP1;;chr17:38497715..38497734,+!p8@RARA!1.24!16.45!RARA;;chr8:72756063..72756125,-!p1@MSC!1.23!32.34!MSC;;chr2:70142189..70142223,+!p2@MXD1!1.21!106.67!MXD1;;chr8:72756267..72756296,-!p4@MSC!1.21!22.13!MSC;;chr3:187454281..187454300,-!p8@BCL6!1.21!15.32!BCL6;;chr19:50432104..50432126,+!p6@ATF5!1.21!15.32!ATF5;;chr19:47616992..47617011,-!p4@ZC3H4!1.20!31.77!ZC3H4;;chr20:48809000..48809053,+!p12@CEBPB!1.20!19.86!CEBPB;;chr6:106535598..106535637,+!p7@PRDM1!1.20!14.75!PRDM1;;chr2:157189180..157189290,-!p1@NR4A2!1.19!75.46!NR4A2;;chr12:96588279..96588299,+!p4@ELK3!1.19!67.52!ELK3;;chr20:47894569..47894799,-!p1@ZNFX1!1.18!367.10!ZNFX1;;chr19:19496624..19496660,+!p3@GATAD2A!1.18!64.68!GATAD2A;;chr8:53373491..53373506,-!p4@ST18!1.18!14.18!ST18;;chr21:36260980..36261011,-!p1@RUNX1!1.17!393.77!RUNX1;;chr6:20403916..20403965,+!p3@E2F3!1.17!61.84!E2F3;;chr6:35310395..35310410,+!p2@PPARD!1.17!53.90!PPARD;;chr2:28618532..28618610,+!p4@FOSL2!1.17!23.83!FOSL2;;chr12:52445218..52445237,+!p1@NR4A1!1.16!167.95!NR4A1;;chr18:3449527..3449582,+!p6@TGIF1!1.16!25.53!TGIF1;;chr9:3526360..3526421,-!p5@RFX3!1.16!24.96!RFX3;;chr9:102584241..102584261,+!p4@NR4A3!1.16!20.99!NR4A3;;chrX:153305962..153305995,-!p5@MECP2!1.16!13.62!MECP2;;chr2:113999360..113999386,-!p4@PAX8!1.16!13.62!PAX8;;chr12:54778351..54778378,-!p6@ZNF385A!1.16!13.62!ZNF385A;;chr5:131826457..131826514,-!p1@IRF1!1.15!503.84!IRF1;;chr18:3449586..3449617,+!p8@TGIF1!1.15!20.99!TGIF1;;chr4:81104985..81105005,+!p4@PRDM8!1.15!15.89!PRDM8;;chrX:129244430..129244442,-!p5@ELF4!1.15!13.05!ELF4;;chr10:104155680..104155687,+!p6@NFKB2!1.15!13.05!NFKB2;;chr17:40440177..40440190,+!p6@STAT5A!1.15!13.05!STAT5A;;chr7:128577972..128578047,+!p1@IRF5!1.14!20.43!IRF5;;chr8:72756667..72756736,-!p2@MSC!1.14!19.86!MSC;;chr10:114709999..114710031,+!p1@TCF7L2!1.13!291.64!TCF7L2;;chr19:45504688..45504782,+!p1@RELB!1.13!75.46!RELB;;chr12:96588368..96588394,+!p3@ELK3!1.13!33.48!ELK3;;chr11:615570..615721,-!p2@IRF7!1.13!24.96!IRF7;;chr8:123793959..123793977,+!p4@ZHX2!1.13!24.40!ZHX2;;chr14:75988831..75988847,+!p2@BATF!1.13!12.48!BATF;;chr2:185462614..185462619,+!p5@ZNF804A!1.13!12.48!ZNF804A;;chr21:34442540..34442560,+!p2@OLIG1!1.13!12.48!OLIG1;;chr11:65667846..65667868,-!p1@FOSL1!1.12!318.30!FOSL1;;chr22:38598086..38598105,+!p1@MAFF!1.12!128.80!MAFF;;chr2:208394817..208394834,+!p3@CREB1!1.12!49.36!CREB1;;chr18:3449720..3449749,+!p2@TGIF1!1.12!26.10!TGIF1;;chr18:3448455..3448480,+!p5@TGIF1!1.12!22.70!TGIF1;;chr2:145275228..145275241,-!p11@ZEB2!1.12!14.75!ZEB2;;chr4:83822199..83822239,+!p2@THAP9!1.12!14.75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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=FF:0000625,FF:0000633,FF:0011109,FF:11876-125C4
|fonse_treatment=FF:0000625,FF:0000633,FF:0011109,FF:11876-125C4
|fonse_treatment_closure=FF:0000625,FF:0000633,FF:0011109,FF:11876-125C4
|fonse_treatment_closure=FF:0000625,FF:0000633,FF:0011109,FF:11876-125C4
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Salmonella%252c%2520donor2.CNhs13485.11876-125C4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Salmonella%252c%2520donor2.CNhs13485.11876-125C4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Salmonella%252c%2520donor2.CNhs13485.11876-125C4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Salmonella%252c%2520donor2.CNhs13485.11876-125C4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Salmonella%252c%2520donor2.CNhs13485.11876-125C4.hg38.nobarcode.ctss.bed.gz
|id=FF:11876-125C4
|is_a=EFO:0002091;;FF:0011109
|is_obsolete=
|library_id=CNhs13485
|library_id_phase_based=2:CNhs13485
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11876
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11876
|name=CD14+ monocytes - treated with Salmonella, donor2
|namespace=
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs13485,LSID1025,release012,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=125
|rna_catalog_number=
|rna_concentration=0.78496
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=D4-7
|rna_od260/230=1.41
|rna_od260/280=2.03
|rna_position=C4
|rna_rin=8.9
|rna_sample_type=total RNA
|rna_tube_id=125C4
|rna_weight_ug=3.53232
|sample_age=51
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=monocyte
|sample_collaboration=Christine Wells (University of Queensland)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor2
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.4698532425133e-283!GO:0005737;cytoplasm;1.54189424674618e-126!GO:0043227;membrane-bound organelle;2.72639574669866e-107!GO:0043231;intracellular membrane-bound organelle;5.42766683170901e-107!GO:0043226;organelle;1.23939202240606e-101!GO:0043229;intracellular organelle;6.92032556384523e-101!GO:0005515;protein binding;4.24424505371039e-78!GO:0044444;cytoplasmic part;7.48090607510054e-78!GO:0044422;organelle part;1.10365235390599e-67!GO:0044446;intracellular organelle part;3.73879633705857e-66!GO:0044237;cellular metabolic process;1.30349067950185e-61!GO:0044238;primary metabolic process;5.48919879376468e-61!GO:0032991;macromolecular complex;2.04122721307338e-58!GO:0043170;macromolecule metabolic process;9.84200310706833e-58!GO:0003723;RNA binding;5.21723923949176e-56!GO:0030529;ribonucleoprotein complex;4.33644131161087e-49!GO:0019538;protein metabolic process;4.20798722130332e-48!GO:0044428;nuclear part;1.59090554344184e-45!GO:0044267;cellular protein metabolic process;6.36170549997076e-44!GO:0044260;cellular macromolecule metabolic process;1.62015007419221e-43!GO:0005634;nucleus;4.48926441567366e-43!GO:0006412;translation;3.94637086548677e-42!GO:0033036;macromolecule localization;1.26361193090701e-40!GO:0045184;establishment of protein localization;1.36159339511031e-39!GO:0015031;protein transport;5.26659808688098e-39!GO:0008104;protein localization;1.21241313263163e-37!GO:0043233;organelle lumen;2.59761692755462e-36!GO:0031974;membrane-enclosed lumen;2.59761692755462e-36!GO:0005829;cytosol;3.08128263321364e-35!GO:0006915;apoptosis;3.08128263321364e-35!GO:0012501;programmed cell death;3.55319349557764e-35!GO:0008219;cell death;1.71264750267479e-33!GO:0016265;death;1.71264750267479e-33!GO:0009059;macromolecule biosynthetic process;2.4551977677014e-32!GO:0009058;biosynthetic process;5.96929849744868e-32!GO:0031090;organelle membrane;7.12446575440149e-32!GO:0044249;cellular biosynthetic process;3.75836272332833e-31!GO:0016071;mRNA metabolic process;2.64018894770086e-30!GO:0043234;protein complex;3.05888057695709e-30!GO:0006396;RNA processing;5.33389668002773e-30!GO:0016043;cellular component organization and biogenesis;5.90612306289293e-30!GO:0043283;biopolymer metabolic process;7.10226058946581e-30!GO:0010467;gene expression;2.69792808791083e-29!GO:0031981;nuclear lumen;5.97364399983433e-28!GO:0046907;intracellular transport;4.16597071138476e-27!GO:0006886;intracellular protein transport;9.1013210232088e-27!GO:0008380;RNA splicing;2.62349852987948e-26!GO:0005840;ribosome;2.42464817113402e-25!GO:0006397;mRNA processing;2.86198885201936e-25!GO:0003735;structural constituent of ribosome;6.91954469923067e-24!GO:0042981;regulation of apoptosis;1.52849729426293e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.93118432600371e-23!GO:0043067;regulation of programmed cell death;3.4317598253915e-23!GO:0033279;ribosomal subunit;8.06811432912386e-23!GO:0031967;organelle envelope;1.08940117331747e-22!GO:0031975;envelope;1.93471126501337e-22!GO:0005739;mitochondrion;3.44163581259549e-22!GO:0000166;nucleotide binding;4.41053837717431e-22!GO:0002376;immune system process;7.19148281206446e-22!GO:0065003;macromolecular complex assembly;8.8560134515468e-22!GO:0008134;transcription factor binding;1.24344448920115e-21!GO:0044445;cytosolic part;2.23643958533959e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.47239000030658e-21!GO:0051649;establishment of cellular localization;9.56833609257683e-21!GO:0005681;spliceosome;1.82251481533838e-20!GO:0007243;protein kinase cascade;2.79414736732812e-20!GO:0051641;cellular localization;3.32898131213169e-20!GO:0005654;nucleoplasm;2.30754097058972e-19!GO:0022607;cellular component assembly;3.14247896175037e-18!GO:0048523;negative regulation of cellular process;4.35097567302602e-18!GO:0016192;vesicle-mediated transport;4.35966402887229e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.36955858865136e-18!GO:0006955;immune response;9.94676027355374e-18!GO:0048770;pigment granule;2.11200329375623e-17!GO:0042470;melanosome;2.11200329375623e-17!GO:0007242;intracellular signaling cascade;3.28963120367709e-17!GO:0044429;mitochondrial part;3.98911748667338e-17!GO:0017111;nucleoside-triphosphatase activity;1.14111587129821e-16!GO:0016462;pyrophosphatase activity;1.6397191194789e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.674082739908e-16!GO:0044451;nucleoplasm part;1.67780938776317e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;2.13395698694848e-16!GO:0048519;negative regulation of biological process;3.39183370274876e-16!GO:0032553;ribonucleotide binding;4.87920506807635e-16!GO:0032555;purine ribonucleotide binding;4.87920506807635e-16!GO:0044265;cellular macromolecule catabolic process;7.35736169107615e-16!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.62998922587721e-16!GO:0017076;purine nucleotide binding;1.13411272889444e-15!GO:0006512;ubiquitin cycle;1.29817632673601e-15!GO:0006119;oxidative phosphorylation;1.88460376823908e-15!GO:0043412;biopolymer modification;2.13846957032827e-15!GO:0043069;negative regulation of programmed cell death;3.6547976341391e-15!GO:0043066;negative regulation of apoptosis;4.32763623936607e-15!GO:0005773;vacuole;4.70491236657554e-15!GO:0043285;biopolymer catabolic process;7.78930548148781e-15!GO:0022618;protein-RNA complex assembly;1.03897607037662e-14!GO:0006464;protein modification process;1.68778175851224e-14!GO:0006950;response to stress;2.62812723069344e-14!GO:0043687;post-translational protein modification;4.30206733898482e-14!GO:0050794;regulation of cellular process;4.38047961058364e-14!GO:0006605;protein targeting;6.66053491330858e-14!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.30473089437677e-14!GO:0006913;nucleocytoplasmic transport;1.07041495373391e-13!GO:0065009;regulation of a molecular function;1.22674332399375e-13!GO:0009057;macromolecule catabolic process;1.22674332399375e-13!GO:0048522;positive regulation of cellular process;1.55944806813314e-13!GO:0009615;response to virus;1.84570299531254e-13!GO:0051169;nuclear transport;1.97907265088946e-13!GO:0005740;mitochondrial envelope;2.19668697876557e-13!GO:0000323;lytic vacuole;3.27555992974894e-13!GO:0005764;lysosome;3.27555992974894e-13!GO:0016874;ligase activity;3.3018914915767e-13!GO:0051246;regulation of protein metabolic process;4.46960927930383e-13!GO:0031966;mitochondrial membrane;4.74239585306509e-13!GO:0016604;nuclear body;5.57649172677613e-13!GO:0019941;modification-dependent protein catabolic process;5.57649172677613e-13!GO:0043632;modification-dependent macromolecule catabolic process;5.57649172677613e-13!GO:0012505;endomembrane system;6.20439794453655e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;8.80146942892222e-13!GO:0048518;positive regulation of biological process;8.99827486569094e-13!GO:0003712;transcription cofactor activity;9.73794450551309e-13!GO:0006996;organelle organization and biogenesis;9.73794450551309e-13!GO:0044257;cellular protein catabolic process;9.73794450551309e-13!GO:0005794;Golgi apparatus;1.04536616295431e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.23052111922401e-12!GO:0006916;anti-apoptosis;1.77690462860408e-12!GO:0006793;phosphorus metabolic process;2.09634744279668e-12!GO:0006796;phosphate metabolic process;2.09634744279668e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.31623486138566e-12!GO:0000502;proteasome complex (sensu Eukaryota);2.41811708107385e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.72882394274449e-12!GO:0019866;organelle inner membrane;2.901446818756e-12!GO:0044248;cellular catabolic process;3.11818568772337e-12!GO:0015934;large ribosomal subunit;3.82822141025959e-12!GO:0005768;endosome;4.17660610242661e-12!GO:0008135;translation factor activity, nucleic acid binding;4.79506230283055e-12!GO:0016070;RNA metabolic process;6.15988257610214e-12!GO:0030163;protein catabolic process;7.35656929227123e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.59303565429445e-12!GO:0015935;small ribosomal subunit;9.34945119898028e-12!GO:0050789;regulation of biological process;1.00436926168723e-11!GO:0003676;nucleic acid binding;1.44419903924743e-11!GO:0006366;transcription from RNA polymerase II promoter;1.48161433839984e-11!GO:0016607;nuclear speck;2.19009431314486e-11!GO:0003743;translation initiation factor activity;3.1068735520031e-11!GO:0005524;ATP binding;4.25331590311602e-11!GO:0065007;biological regulation;4.30138155771216e-11!GO:0032559;adenyl ribonucleotide binding;4.74734525340903e-11!GO:0009967;positive regulation of signal transduction;5.26096294395217e-11!GO:0016310;phosphorylation;6.44067889292118e-11!GO:0030554;adenyl nucleotide binding;1.16046963462159e-10!GO:0006413;translational initiation;1.16819537161024e-10!GO:0048468;cell development;1.22598424594596e-10!GO:0006457;protein folding;1.55925911513597e-10!GO:0051186;cofactor metabolic process;2.97447399470226e-10!GO:0006417;regulation of translation;3.31353122991179e-10!GO:0050790;regulation of catalytic activity;5.56795007569356e-10!GO:0006446;regulation of translational initiation;5.58869204202609e-10!GO:0005635;nuclear envelope;6.33458521681905e-10!GO:0016787;hydrolase activity;6.95535717558062e-10!GO:0005743;mitochondrial inner membrane;7.04480666794151e-10!GO:0044455;mitochondrial membrane part;7.82059884195527e-10!GO:0006732;coenzyme metabolic process;1.07894394848659e-09!GO:0005783;endoplasmic reticulum;1.18166976430889e-09!GO:0009607;response to biotic stimulus;1.22310777890518e-09!GO:0051082;unfolded protein binding;1.41508988107559e-09!GO:0005730;nucleolus;1.6548567016206e-09!GO:0031324;negative regulation of cellular metabolic process;1.7538677444206e-09!GO:0043065;positive regulation of apoptosis;1.80882656646641e-09!GO:0006259;DNA metabolic process;2.00306682597174e-09!GO:0008639;small protein conjugating enzyme activity;2.63694109228145e-09!GO:0043068;positive regulation of programmed cell death;2.91886964808537e-09!GO:0004842;ubiquitin-protein ligase activity;3.31704765492442e-09!GO:0019787;small conjugating protein ligase activity;3.46710791685677e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.30058193417937e-09!GO:0016887;ATPase activity;4.6002044979704e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;4.73104338387302e-09!GO:0000375;RNA splicing, via transesterification reactions;4.73104338387302e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.73104338387302e-09!GO:0005770;late endosome;4.77269361770656e-09!GO:0042623;ATPase activity, coupled;5.82958676791736e-09!GO:0009889;regulation of biosynthetic process;6.13462376881719e-09!GO:0017038;protein import;6.55899188681563e-09!GO:0051170;nuclear import;7.65468003424585e-09!GO:0019829;cation-transporting ATPase activity;9.05727090565552e-09!GO:0048193;Golgi vesicle transport;1.1294302196479e-08!GO:0031326;regulation of cellular biosynthetic process;1.35527134934816e-08!GO:0019899;enzyme binding;1.60702017536277e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.68170295125204e-08!GO:0051726;regulation of cell cycle;1.72798261743185e-08!GO:0015986;ATP synthesis coupled proton transport;1.72798261743185e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.72798261743185e-08!GO:0009056;catabolic process;1.76734987518535e-08!GO:0000074;regulation of progression through cell cycle;1.87065537689551e-08!GO:0006606;protein import into nucleus;1.98794188919979e-08!GO:0005746;mitochondrial respiratory chain;2.10480611965123e-08!GO:0006163;purine nucleotide metabolic process;2.65546267892047e-08!GO:0006164;purine nucleotide biosynthetic process;2.75045315504862e-08!GO:0031965;nuclear membrane;3.08059819943954e-08!GO:0009892;negative regulation of metabolic process;3.30503709492978e-08!GO:0016564;transcription repressor activity;3.46760830020783e-08!GO:0009966;regulation of signal transduction;3.64928409738072e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.29463777724067e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.92702528449356e-08!GO:0007049;cell cycle;4.92896656612055e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.99089470978634e-08!GO:0009150;purine ribonucleotide metabolic process;4.99089470978634e-08!GO:0003713;transcription coactivator activity;6.57609333917328e-08!GO:0043228;non-membrane-bound organelle;6.74750678212485e-08!GO:0043232;intracellular non-membrane-bound organelle;6.74750678212485e-08!GO:0009259;ribonucleotide metabolic process;7.63008789668291e-08!GO:0016881;acid-amino acid ligase activity;7.77831680857908e-08!GO:0006461;protein complex assembly;8.58246012161613e-08!GO:0044453;nuclear membrane part;8.74326075855442e-08!GO:0006917;induction of apoptosis;1.02439727521848e-07!GO:0050136;NADH dehydrogenase (quinone) activity;1.11232807995814e-07!GO:0003954;NADH dehydrogenase activity;1.11232807995814e-07!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.11232807995814e-07!GO:0007264;small GTPase mediated signal transduction;1.4242321307181e-07!GO:0009108;coenzyme biosynthetic process;1.53127783104559e-07!GO:0005774;vacuolar membrane;1.5474527736048e-07!GO:0009055;electron carrier activity;1.5474527736048e-07!GO:0006954;inflammatory response;1.55555108224512e-07!GO:0003924;GTPase activity;1.64572883161674e-07!GO:0012502;induction of programmed cell death;1.64886294643884e-07!GO:0009260;ribonucleotide biosynthetic process;1.72179314454765e-07!GO:0006754;ATP biosynthetic process;1.74252299688019e-07!GO:0006753;nucleoside phosphate metabolic process;1.74252299688019e-07!GO:0005525;GTP binding;1.7505372354987e-07!GO:0051188;cofactor biosynthetic process;1.769298557032e-07!GO:0008565;protein transporter activity;1.87647828975246e-07!GO:0016044;membrane organization and biogenesis;1.97316688999236e-07!GO:0045321;leukocyte activation;2.46422732509923e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.46422732509923e-07!GO:0045786;negative regulation of progression through cell cycle;3.8671531327855e-07!GO:0044432;endoplasmic reticulum part;4.85236824905691e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.94156822950329e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.30906984594364e-07!GO:0004386;helicase activity;6.68288666178222e-07!GO:0044437;vacuolar part;6.85800381495035e-07!GO:0015078;hydrogen ion transmembrane transporter activity;6.86247998484691e-07!GO:0016481;negative regulation of transcription;7.36214867752305e-07!GO:0046034;ATP metabolic process;8.05839221841488e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.35656602599792e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.35656602599792e-07!GO:0050657;nucleic acid transport;8.80551553628392e-07!GO:0051236;establishment of RNA localization;8.80551553628392e-07!GO:0050658;RNA transport;8.80551553628392e-07!GO:0009142;nucleoside triphosphate biosynthetic process;9.07389072481275e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.07389072481275e-07!GO:0042775;organelle ATP synthesis coupled electron transport;9.57079929713086e-07!GO:0042773;ATP synthesis coupled electron transport;9.57079929713086e-07!GO:0008026;ATP-dependent helicase activity;9.65964746901057e-07!GO:0008047;enzyme activator activity;1.13073735902238e-06!GO:0006403;RNA localization;1.13669658058122e-06!GO:0005765;lysosomal membrane;1.24962596711057e-06!GO:0001816;cytokine production;1.30481388008205e-06!GO:0030964;NADH dehydrogenase complex (quinone);1.50014747360782e-06!GO:0045271;respiratory chain complex I;1.50014747360782e-06!GO:0005747;mitochondrial respiratory chain complex I;1.50014747360782e-06!GO:0006952;defense response;1.50932105820269e-06!GO:0016563;transcription activator activity;1.65766505285233e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.82902009213548e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.82902009213548e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.92153956822011e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.92167935900318e-06!GO:0044440;endosomal part;2.00749947392664e-06!GO:0010008;endosome membrane;2.00749947392664e-06!GO:0006752;group transfer coenzyme metabolic process;2.11057623817558e-06!GO:0005793;ER-Golgi intermediate compartment;2.29285322000375e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.67538266110324e-06!GO:0015399;primary active transmembrane transporter activity;2.67538266110324e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.1671980879647e-06!GO:0031982;vesicle;3.29098895306032e-06!GO:0032446;protein modification by small protein conjugation;3.59724116360695e-06!GO:0005643;nuclear pore;3.95028507509211e-06!GO:0032561;guanyl ribonucleotide binding;3.96782425757524e-06!GO:0019001;guanyl nucleotide binding;3.96782425757524e-06!GO:0051338;regulation of transferase activity;4.84430480930815e-06!GO:0046649;lymphocyte activation;5.6494397354653e-06!GO:0006897;endocytosis;5.76935860917468e-06!GO:0010324;membrane invagination;5.76935860917468e-06!GO:0016568;chromatin modification;5.76935860917468e-06!GO:0009141;nucleoside triphosphate metabolic process;6.0844336944546e-06!GO:0016567;protein ubiquitination;6.39258164923763e-06!GO:0019222;regulation of metabolic process;6.62017669257572e-06!GO:0051028;mRNA transport;8.56115966112268e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;9.03852813254488e-06!GO:0043549;regulation of kinase activity;1.01820772266933e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.18312694695938e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.18312694695938e-05!GO:0008632;apoptotic program;1.19423778650794e-05!GO:0016197;endosome transport;1.25663472362132e-05!GO:0030097;hemopoiesis;1.25826782261416e-05!GO:0031980;mitochondrial lumen;1.26175404734132e-05!GO:0005759;mitochondrial matrix;1.26175404734132e-05!GO:0009893;positive regulation of metabolic process;1.28345633740263e-05!GO:0001775;cell activation;1.33928983103699e-05!GO:0031252;leading edge;1.49288289397622e-05!GO:0030099;myeloid cell differentiation;1.50154027373905e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.52371934357866e-05!GO:0003714;transcription corepressor activity;1.59557362042914e-05!GO:0022402;cell cycle process;1.61832633947985e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.67502095994324e-05!GO:0003724;RNA helicase activity;1.73488103616868e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.75096813502919e-05!GO:0005789;endoplasmic reticulum membrane;1.75096813502919e-05!GO:0051707;response to other organism;1.88282667443404e-05!GO:0031988;membrane-bound vesicle;1.90443235758384e-05!GO:0031410;cytoplasmic vesicle;1.93615497022077e-05!GO:0045859;regulation of protein kinase activity;1.96813165366265e-05!GO:0051789;response to protein stimulus;2.14040594955844e-05!GO:0006986;response to unfolded protein;2.14040594955844e-05!GO:0006323;DNA packaging;2.22398875822669e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.35215601503103e-05!GO:0009611;response to wounding;2.58594808602736e-05!GO:0048475;coated membrane;2.76880770523344e-05!GO:0030117;membrane coat;2.76880770523344e-05!GO:0006401;RNA catabolic process;2.84271817496683e-05!GO:0030120;vesicle coat;3.1531119975528e-05!GO:0030662;coated vesicle membrane;3.1531119975528e-05!GO:0043492;ATPase activity, coupled to movement of substances;3.53720818184053e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;3.72939693534815e-05!GO:0046930;pore complex;4.38429690241595e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.52479105793832e-05!GO:0005769;early endosome;4.95043700905179e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;5.23411330308092e-05!GO:0042254;ribosome biogenesis and assembly;5.58108275718175e-05!GO:0042110;T cell activation;5.61964116905868e-05!GO:0006974;response to DNA damage stimulus;5.74361382108886e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.01131976323199e-05!GO:0016023;cytoplasmic membrane-bound vesicle;6.35967748004542e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.36812336571503e-05!GO:0046822;regulation of nucleocytoplasmic transport;6.41221398947184e-05!GO:0004298;threonine endopeptidase activity;6.42346399585921e-05!GO:0031902;late endosome membrane;6.51453663622972e-05!GO:0045941;positive regulation of transcription;6.53626761015576e-05!GO:0004674;protein serine/threonine kinase activity;7.29909298367103e-05!GO:0007050;cell cycle arrest;8.00604549734967e-05!GO:0065002;intracellular protein transport across a membrane;8.68424620610816e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.82725092877761e-05!GO:0051168;nuclear export;9.24726089584712e-05!GO:0046519;sphingoid metabolic process;0.000103994375276201!GO:0002521;leukocyte differentiation;0.000108508746272897!GO:0044431;Golgi apparatus part;0.000117175828596834!GO:0051336;regulation of hydrolase activity;0.00012925689687631!GO:0030695;GTPase regulator activity;0.000139636501816631!GO:0030532;small nuclear ribonucleoprotein complex;0.000142910909246322!GO:0043566;structure-specific DNA binding;0.00014885365639101!GO:0051223;regulation of protein transport;0.000149081829278374!GO:0006613;cotranslational protein targeting to membrane;0.000170442043612956!GO:0051427;hormone receptor binding;0.000172836181925247!GO:0045893;positive regulation of transcription, DNA-dependent;0.000174283400213283!GO:0006402;mRNA catabolic process;0.000176928352206337!GO:0006672;ceramide metabolic process;0.000182109209667716!GO:0005057;receptor signaling protein activity;0.00018605981103323!GO:0031325;positive regulation of cellular metabolic process;0.000187848988974542!GO:0007265;Ras protein signal transduction;0.000190470056558309!GO:0022415;viral reproductive process;0.000196734509720132!GO:0043085;positive regulation of catalytic activity;0.000205775156388019!GO:0005083;small GTPase regulator activity;0.000212173769586777!GO:0046983;protein dimerization activity;0.000238161315387756!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00024203791162491!GO:0003697;single-stranded DNA binding;0.000249977381979712!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000253148338546602!GO:0005885;Arp2/3 protein complex;0.000277022498956275!GO:0035257;nuclear hormone receptor binding;0.000291441791652346!GO:0045259;proton-transporting ATP synthase complex;0.000298418470425564!GO:0001726;ruffle;0.000300373038321237!GO:0002520;immune system development;0.000307542702759484!GO:0005096;GTPase activator activity;0.000314592665470327!GO:0002757;immune response-activating signal transduction;0.000331126506498956!GO:0048534;hemopoietic or lymphoid organ development;0.00033236304853259!GO:0009060;aerobic respiration;0.000335189476313595!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000362044188851802!GO:0030036;actin cytoskeleton organization and biogenesis;0.000362660264803855!GO:0006818;hydrogen transport;0.000364437597402962!GO:0000245;spliceosome assembly;0.00039817467289178!GO:0008186;RNA-dependent ATPase activity;0.000402188942173811!GO:0051276;chromosome organization and biogenesis;0.000417443151239176!GO:0016740;transferase activity;0.000417443151239176!GO:0015992;proton transport;0.000450516168361356!GO:0031323;regulation of cellular metabolic process;0.000470975951563309!GO:0001817;regulation of cytokine production;0.000470975951563309!GO:0005798;Golgi-associated vesicle;0.000499127722723761!GO:0006643;membrane lipid metabolic process;0.000520566864526645!GO:0009117;nucleotide metabolic process;0.000560640523710549!GO:0002764;immune response-regulating signal transduction;0.000598430404308182!GO:0033157;regulation of intracellular protein transport;0.000612723289151595!GO:0042306;regulation of protein import into nucleus;0.000612723289151595!GO:0060090;molecular adaptor activity;0.000623682824776014!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00063279231311077!GO:0007259;JAK-STAT cascade;0.000643149315472981!GO:0045637;regulation of myeloid cell differentiation;0.000651564958104305!GO:0022890;inorganic cation transmembrane transporter activity;0.000656985689574605!GO:0007034;vacuolar transport;0.00068305303630737!GO:0007041;lysosomal transport;0.000707036069595855!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000707036069595855!GO:0006281;DNA repair;0.000716500801532713!GO:0006919;caspase activation;0.000755874764225789!GO:0043280;positive regulation of caspase activity;0.000769628978491574!GO:0002274;myeloid leukocyte activation;0.000801013919739644!GO:0032940;secretion by cell;0.000808735683486409!GO:0042221;response to chemical stimulus;0.000822069398902218!GO:0008654;phospholipid biosynthetic process;0.000822525365440095!GO:0043281;regulation of caspase activity;0.000856209744870454!GO:0005741;mitochondrial outer membrane;0.000883861342973525!GO:0005667;transcription factor complex;0.000893475429703993!GO:0051059;NF-kappaB binding;0.000893475429703993!GO:0007033;vacuole organization and biogenesis;0.000893475429703993!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000893475429703993!GO:0004812;aminoacyl-tRNA ligase activity;0.000893475429703993!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000893475429703993!GO:0008234;cysteine-type peptidase activity;0.000906441058553977!GO:0051090;regulation of transcription factor activity;0.000920731166861751!GO:0045892;negative regulation of transcription, DNA-dependent;0.000973646870778455!GO:0043623;cellular protein complex assembly;0.00107520578950117!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0011161903626124!GO:0004004;ATP-dependent RNA helicase activity;0.00113518676998716!GO:0009165;nucleotide biosynthetic process;0.00116955233058107!GO:0003729;mRNA binding;0.00118817015485253!GO:0002252;immune effector process;0.001317525141038!GO:0043038;amino acid activation;0.0013611574485256!GO:0006418;tRNA aminoacylation for protein translation;0.0013611574485256!GO:0043039;tRNA aminoacylation;0.0013611574485256!GO:0009719;response to endogenous stimulus;0.00141434769219271!GO:0007040;lysosome organization and biogenesis;0.00142180383721889!GO:0050900;leukocyte migration;0.00143898189746761!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00144004896921005!GO:0045333;cellular respiration;0.00147936480614587!GO:0018193;peptidyl-amino acid modification;0.00149446848602396!GO:0042990;regulation of transcription factor import into nucleus;0.00175592565104883!GO:0042991;transcription factor import into nucleus;0.00175592565104883!GO:0031968;organelle outer membrane;0.00189074163264981!GO:0005761;mitochondrial ribosome;0.00194980673209675!GO:0000313;organellar ribosome;0.00194980673209675!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0020346838131513!GO:0042802;identical protein binding;0.0020346838131513!GO:0030149;sphingolipid catabolic process;0.002068475306536!GO:0019904;protein domain specific binding;0.002068475306536!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00209723500032767!GO:0019867;outer membrane;0.00210808405559891!GO:0000151;ubiquitin ligase complex;0.00210914586027051!GO:0000139;Golgi membrane;0.00212530950224468!GO:0044262;cellular carbohydrate metabolic process;0.00213272853668246!GO:0016072;rRNA metabolic process;0.00213947436280436!GO:0007005;mitochondrion organization and biogenesis;0.00230288744522094!GO:0030029;actin filament-based process;0.00234791371781492!GO:0016301;kinase activity;0.00236768208645984!GO:0033673;negative regulation of kinase activity;0.00242236666014876!GO:0006469;negative regulation of protein kinase activity;0.00242236666014876!GO:0031072;heat shock protein binding;0.00243518030220221!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00244789655748966!GO:0005637;nuclear inner membrane;0.00253547589450015!GO:0033116;ER-Golgi intermediate compartment membrane;0.0026096643138519!GO:0006364;rRNA processing;0.00271331787307267!GO:0001819;positive regulation of cytokine production;0.00278441582097805!GO:0046966;thyroid hormone receptor binding;0.0029059190610627!GO:0006091;generation of precursor metabolites and energy;0.00295785112782854!GO:0051187;cofactor catabolic process;0.00296520282116432!GO:0016251;general RNA polymerase II transcription factor activity;0.00306784831902959!GO:0006935;chemotaxis;0.00327741148771212!GO:0042330;taxis;0.00327741148771212!GO:0006665;sphingolipid metabolic process;0.00327741148771212!GO:0006399;tRNA metabolic process;0.00339465879671385!GO:0006612;protein targeting to membrane;0.00343738196282994!GO:0051348;negative regulation of transferase activity;0.00350943758054227!GO:0008383;manganese superoxide dismutase activity;0.00362402865281122!GO:0001315;age-dependent response to reactive oxygen species;0.00362402865281122!GO:0002250;adaptive immune response;0.00364006402679649!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00364006402679649!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00371485781807174!GO:0000082;G1/S transition of mitotic cell cycle;0.00371485781807174!GO:0030218;erythrocyte differentiation;0.00379568823355798!GO:0048872;homeostasis of number of cells;0.00385944698832147!GO:0000165;MAPKKK cascade;0.00393357646605956!GO:0006468;protein amino acid phosphorylation;0.00395836967306914!GO:0043433;negative regulation of transcription factor activity;0.00426247410742274!GO:0065004;protein-DNA complex assembly;0.00439878881944608!GO:0010468;regulation of gene expression;0.00442763959542595!GO:0004197;cysteine-type endopeptidase activity;0.00454370253898699!GO:0006099;tricarboxylic acid cycle;0.00458115512519241!GO:0046356;acetyl-CoA catabolic process;0.00458115512519241!GO:0048487;beta-tubulin binding;0.00471618560041827!GO:0016791;phosphoric monoester hydrolase activity;0.00497749482337083!GO:0008283;cell proliferation;0.00497749482337083!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00510223554862334!GO:0019079;viral genome replication;0.00510449910128138!GO:0032386;regulation of intracellular transport;0.00525899167619589!GO:0050851;antigen receptor-mediated signaling pathway;0.00536888099139096!GO:0004860;protein kinase inhibitor activity;0.00573796601894855!GO:0006891;intra-Golgi vesicle-mediated transport;0.00581844933108786!GO:0031901;early endosome membrane;0.00590027857489175!GO:0045646;regulation of erythrocyte differentiation;0.00597691984080566!GO:0051098;regulation of binding;0.00597691984080566!GO:0008637;apoptotic mitochondrial changes;0.00614373613299946!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00621686617385519!GO:0005070;SH3/SH2 adaptor activity;0.00658127928972923!GO:0019210;kinase inhibitor activity;0.00658127928972923!GO:0002684;positive regulation of immune system process;0.00658127928972923!GO:0019058;viral infectious cycle;0.00658127928972923!GO:0042613;MHC class II protein complex;0.00658127928972923!GO:0006611;protein export from nucleus;0.00693959259489879!GO:0019882;antigen processing and presentation;0.00701172624761067!GO:0051345;positive regulation of hydrolase activity;0.00741703606601087!GO:0016779;nucleotidyltransferase activity;0.00772573823961769!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00772573823961769!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00772573823961769!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00772573823961769!GO:0002682;regulation of immune system process;0.00802601075975357!GO:0005484;SNAP receptor activity;0.00811778780110692!GO:0042107;cytokine metabolic process;0.00827096958626579!GO:0030521;androgen receptor signaling pathway;0.00835879626266981!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00839636286536941!GO:0043621;protein self-association;0.00862747607808608!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.00870590840516515!GO:0002819;regulation of adaptive immune response;0.00870590840516515!GO:0043087;regulation of GTPase activity;0.00874868803797947!GO:0001776;leukocyte homeostasis;0.00874868803797947!GO:0006084;acetyl-CoA metabolic process;0.00882386693895713!GO:0005099;Ras GTPase activator activity;0.00882386693895713!GO:0045454;cell redox homeostasis;0.00938695048818579!GO:0050778;positive regulation of immune response;0.00938695048818579!GO:0051049;regulation of transport;0.00938695048818579!GO:0005813;centrosome;0.00949445340068378!GO:0030658;transport vesicle membrane;0.0100520947778932!GO:0008139;nuclear localization sequence binding;0.0101985847966138!GO:0009109;coenzyme catabolic process;0.0102346682330195!GO:0030127;COPII vesicle coat;0.0102862949583168!GO:0012507;ER to Golgi transport vesicle membrane;0.0102862949583168!GO:0005048;signal sequence binding;0.0103630691766023!GO:0051329;interphase of mitotic cell cycle;0.0106353817787708!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0107368666626573!GO:0000209;protein polyubiquitination;0.0108005021179669!GO:0004185;serine carboxypeptidase activity;0.0108327945205433!GO:0051325;interphase;0.011311270334848!GO:0042113;B cell activation;0.0113621009198339!GO:0051092;activation of NF-kappaB transcription factor;0.0114636647835145!GO:0003725;double-stranded RNA binding;0.0116898426058661!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0117127295324239!GO:0030258;lipid modification;0.0117375820090696!GO:0031625;ubiquitin protein ligase binding;0.0117479827102483!GO:0045639;positive regulation of myeloid cell differentiation;0.0117566711506784!GO:0019377;glycolipid catabolic process;0.0118036096417404!GO:0042089;cytokine biosynthetic process;0.0118127836456333!GO:0030134;ER to Golgi transport vesicle;0.0119399288888617!GO:0008361;regulation of cell size;0.0121844486356676!GO:0006749;glutathione metabolic process;0.0122737615998755!GO:0007165;signal transduction;0.0125242309606653!GO:0002573;myeloid leukocyte differentiation;0.0127486537009392!GO:0019220;regulation of phosphate metabolic process;0.0129275883370947!GO:0051174;regulation of phosphorus metabolic process;0.0129275883370947!GO:0046467;membrane lipid biosynthetic process;0.0129296882640806!GO:0030098;lymphocyte differentiation;0.0130165959900837!GO:0006607;NLS-bearing substrate import into nucleus;0.013179141450096!GO:0048471;perinuclear region of cytoplasm;0.0132413695726026!GO:0048500;signal recognition particle;0.0132642453121027!GO:0043021;ribonucleoprotein binding;0.0133534780972606!GO:0032943;mononuclear cell proliferation;0.0133536816896965!GO:0046651;lymphocyte proliferation;0.0133536816896965!GO:0030595;leukocyte chemotaxis;0.0134336487949552!GO:0002444;myeloid leukocyte mediated immunity;0.0138490921894041!GO:0002440;production of molecular mediator of immune response;0.0139635686116711!GO:0045792;negative regulation of cell size;0.0142990934240843!GO:0000278;mitotic cell cycle;0.014366569702595!GO:0019901;protein kinase binding;0.0144789797239975!GO:0033367;protein localization in mast cell secretory granule;0.0144789797239975!GO:0033365;protein localization in organelle;0.0144789797239975!GO:0033371;T cell secretory granule organization and biogenesis;0.0144789797239975!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0144789797239975!GO:0033375;protease localization in T cell secretory granule;0.0144789797239975!GO:0042629;mast cell granule;0.0144789797239975!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0144789797239975!GO:0033364;mast cell secretory granule organization and biogenesis;0.0144789797239975!GO:0033380;granzyme B localization in T cell secretory granule;0.0144789797239975!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0144789797239975!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0144789797239975!GO:0033368;protease localization in mast cell secretory granule;0.0144789797239975!GO:0033366;protein localization in secretory granule;0.0144789797239975!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0144789797239975!GO:0033374;protein localization in T cell secretory granule;0.0144789797239975!GO:0051051;negative regulation of transport;0.0146855978740846!GO:0006352;transcription initiation;0.0147472412934094!GO:0000785;chromatin;0.0161005005842257!GO:0043407;negative regulation of MAP kinase activity;0.0162438456037042!GO:0030308;negative regulation of cell growth;0.0162542207009631!GO:0046466;membrane lipid catabolic process;0.0162705498726632!GO:0006350;transcription;0.0172428124211838!GO:0030518;steroid hormone receptor signaling pathway;0.0172428124211838!GO:0051252;regulation of RNA metabolic process;0.0175303106663927!GO:0007162;negative regulation of cell adhesion;0.0176026205783739!GO:0050776;regulation of immune response;0.0177448487252586!GO:0005138;interleukin-6 receptor binding;0.0182824132037342!GO:0006368;RNA elongation from RNA polymerase II promoter;0.018364154032792!GO:0031327;negative regulation of cellular biosynthetic process;0.018445905392096!GO:0008333;endosome to lysosome transport;0.0184741336583809!GO:0042611;MHC protein complex;0.0187440186988889!GO:0030503;regulation of cell redox homeostasis;0.0188410836475521!GO:0042108;positive regulation of cytokine biosynthetic process;0.0191122196661875!GO:0006984;ER-nuclear signaling pathway;0.0195763773440625!GO:0009891;positive regulation of biosynthetic process;0.019827076400057!GO:0002237;response to molecule of bacterial origin;0.0200708199761712!GO:0032763;regulation of mast cell cytokine production;0.0200937321509084!GO:0032762;mast cell cytokine production;0.0200937321509084!GO:0005815;microtubule organizing center;0.0201655194295759!GO:0016363;nuclear matrix;0.0201655194295759!GO:0046479;glycosphingolipid catabolic process;0.0201795423782107!GO:0019955;cytokine binding;0.0205170382601001!GO:0009306;protein secretion;0.0205170382601001!GO:0045576;mast cell activation;0.0205170382601001!GO:0005152;interleukin-1 receptor antagonist activity;0.0205523772592314!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0205523772592314!GO:0051247;positive regulation of protein metabolic process;0.0207311700642013!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0208552500048582!GO:0045047;protein targeting to ER;0.0208552500048582!GO:0030660;Golgi-associated vesicle membrane;0.0211454124643532!GO:0045746;negative regulation of Notch signaling pathway;0.021728100836367!GO:0030867;rough endoplasmic reticulum membrane;0.0217292700895444!GO:0042035;regulation of cytokine biosynthetic process;0.0218557774039657!GO:0008624;induction of apoptosis by extracellular signals;0.0220538600683747!GO:0030041;actin filament polymerization;0.0223645087337469!GO:0030100;regulation of endocytosis;0.0227830072637344!GO:0051023;regulation of immunoglobulin secretion;0.0227830072637344!GO:0045994;positive regulation of translational initiation by iron;0.0227830072637344!GO:0030137;COPI-coated vesicle;0.0228670008574694!GO:0030027;lamellipodium;0.0229592856843429!GO:0051347;positive regulation of transferase activity;0.02327386235763!GO:0006458;'de novo' protein folding;0.0232923932718419!GO:0051084;'de novo' posttranslational protein folding;0.0232923932718419!GO:0003702;RNA polymerase II transcription factor activity;0.0234088019582669!GO:0002718;regulation of cytokine production during immune response;0.0235150757112106!GO:0002367;cytokine production during immune response;0.0235150757112106!GO:0002700;regulation of production of molecular mediator of immune response;0.0235150757112106!GO:0000049;tRNA binding;0.0236137593562086!GO:0044255;cellular lipid metabolic process;0.0241227544240118!GO:0002443;leukocyte mediated immunity;0.024331335447785!GO:0016049;cell growth;0.0247536285103674!GO:0005905;coated pit;0.0247536285103674!GO:0002467;germinal center formation;0.0247536285103674!GO:0019371;cyclooxygenase pathway;0.0248118464907821!GO:0033549;MAP kinase phosphatase activity;0.025058081189402!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.025058081189402!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.025101955140019!GO:0003727;single-stranded RNA binding;0.0252855882325268!GO:0009890;negative regulation of biosynthetic process;0.0252875973255801!GO:0005788;endoplasmic reticulum lumen;0.0253204506138141!GO:0030663;COPI coated vesicle membrane;0.0253204506138141!GO:0030126;COPI vesicle coat;0.0253204506138141!GO:0030031;cell projection biogenesis;0.0255546926749626!GO:0051101;regulation of DNA binding;0.0256829653805327!GO:0006644;phospholipid metabolic process;0.0256829653805327!GO:0050811;GABA receptor binding;0.0256884549100283!GO:0003690;double-stranded DNA binding;0.0257618090914525!GO:0051251;positive regulation of lymphocyte activation;0.0257618090914525!GO:0030118;clathrin coat;0.0265114008225213!GO:0051235;maintenance of localization;0.0265966369075543!GO:0002253;activation of immune response;0.0267027518325257!GO:0045045;secretory pathway;0.0268040482358935!GO:0000339;RNA cap binding;0.0268384215631336!GO:0045727;positive regulation of translation;0.026915950402117!GO:0042092;T-helper 2 type immune response;0.0271548003181672!GO:0046631;alpha-beta T cell activation;0.0271758231342781!GO:0030217;T cell differentiation;0.0275553892911667!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0276873762357055!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0278825168472256!GO:0002821;positive regulation of adaptive immune response;0.0278825168472256!GO:0042348;NF-kappaB import into nucleus;0.0280150000997739!GO:0042345;regulation of NF-kappaB import into nucleus;0.0280150000997739!GO:0051881;regulation of mitochondrial membrane potential;0.0291696774553555!GO:0048146;positive regulation of fibroblast proliferation;0.02944291203218!GO:0008312;7S RNA binding;0.0295031584300878!GO:0005149;interleukin-1 receptor binding;0.0296601299832528!GO:0043022;ribosome binding;0.0297951758441089!GO:0042992;negative regulation of transcription factor import into nucleus;0.0298755906643016!GO:0042308;negative regulation of protein import into nucleus;0.0298755906643016!GO:0006333;chromatin assembly or disassembly;0.0298755906643016!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0298755906643016!GO:0004177;aminopeptidase activity;0.0301044556252191!GO:0002224;toll-like receptor signaling pathway;0.0305637066105794!GO:0002221;pattern recognition receptor signaling pathway;0.0305637066105794!GO:0002697;regulation of immune effector process;0.0305637066105794!GO:0019318;hexose metabolic process;0.0308654611401994!GO:0017166;vinculin binding;0.0308654611401994!GO:0050865;regulation of cell activation;0.0312478645665019!GO:0051900;regulation of mitochondrial depolarization;0.0316119198231897!GO:0030176;integral to endoplasmic reticulum membrane;0.0316119198231897!GO:0016311;dephosphorylation;0.0319533217239484!GO:0043300;regulation of leukocyte degranulation;0.0322817805623762!GO:0015923;mannosidase activity;0.0323759822345173!GO:0051091;positive regulation of transcription factor activity;0.0323759822345173!GO:0006650;glycerophospholipid metabolic process;0.032491794802349!GO:0046578;regulation of Ras protein signal transduction;0.0325571506531225!GO:0015631;tubulin binding;0.0325943402595706!GO:0030384;phosphoinositide metabolic process;0.0327952863893178!GO:0008286;insulin receptor signaling pathway;0.033606334378764!GO:0042127;regulation of cell proliferation;0.034190019585648!GO:0043299;leukocyte degranulation;0.0346398061435017!GO:0050727;regulation of inflammatory response;0.0349633158020232!GO:0031347;regulation of defense response;0.0349633158020232!GO:0045603;positive regulation of endothelial cell differentiation;0.0349633158020232!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.035740520974707!GO:0051050;positive regulation of transport;0.03582596578082!GO:0005869;dynactin complex;0.0360446251159331!GO:0042832;defense response to protozoan;0.0360446251159331!GO:0048144;fibroblast proliferation;0.0362708716197451!GO:0048145;regulation of fibroblast proliferation;0.0362708716197451!GO:0032318;regulation of Ras GTPase activity;0.0362708716197451!GO:0045926;negative regulation of growth;0.0364627019548165!GO:0019752;carboxylic acid metabolic process;0.0365398420113895!GO:0005996;monosaccharide metabolic process;0.0367951281241821!GO:0006405;RNA export from nucleus;0.0367951281241821!GO:0030377;U-plasminogen activator receptor activity;0.0367951281241821!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0370389741124493!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0370389741124493!GO:0030433;ER-associated protein catabolic process;0.037104047670187!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.037104047670187!GO:0000118;histone deacetylase complex;0.037104047670187!GO:0032760;positive regulation of tumor necrosis factor production;0.0377937546562218!GO:0001562;response to protozoan;0.037896264840293!GO:0017148;negative regulation of translation;0.0382324216117325!GO:0050870;positive regulation of T cell activation;0.0383773494079764!GO:0043488;regulation of mRNA stability;0.0385074726898568!GO:0043487;regulation of RNA stability;0.0385074726898568!GO:0006007;glucose catabolic process;0.0390378932418313!GO:0042098;T cell proliferation;0.0397552031072946!GO:0030155;regulation of cell adhesion;0.0397552031072946!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0399174385771742!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0399174385771742!GO:0009126;purine nucleoside monophosphate metabolic process;0.0399174385771742!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0399174385771742!GO:0007626;locomotory behavior;0.0399189145316876!GO:0007006;mitochondrial membrane organization and biogenesis;0.0399963621639838!GO:0042347;negative regulation of NF-kappaB import into nucleus;0.0409574172785735!GO:0030522;intracellular receptor-mediated signaling pathway;0.0410990618598007!GO:0000738;DNA catabolic process, exonucleolytic;0.0410990618598007!GO:0019900;kinase binding;0.0411432648661547!GO:0042325;regulation of phosphorylation;0.0416120315074499!GO:0008610;lipid biosynthetic process;0.0422709527944449!GO:0030968;unfolded protein response;0.0425160182458086!GO:0051249;regulation of lymphocyte activation;0.0431390398671986!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0431390398671986!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0431390398671986!GO:0030693;caspase activity;0.0432744539400618!GO:0035035;histone acetyltransferase binding;0.0436997469469518!GO:0006082;organic acid metabolic process;0.04423700175542!GO:0033674;positive regulation of kinase activity;0.0445688075363836!GO:0005669;transcription factor TFIID complex;0.0447003516413847!GO:0051224;negative regulation of protein transport;0.0454857010064567!GO:0006354;RNA elongation;0.0456757715632438!GO:0006595;polyamine metabolic process;0.0456981453342932!GO:0000287;magnesium ion binding;0.0462027852678251!GO:0046426;negative regulation of JAK-STAT cascade;0.0463693913186935!GO:0046823;negative regulation of nucleocytoplasmic transport;0.0468857280053652!GO:0042326;negative regulation of phosphorylation;0.0478631713472021!GO:0045936;negative regulation of phosphate metabolic process;0.0485363531220982!GO:0001836;release of cytochrome c from mitochondria;0.0487574789193105!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0495622186415826!GO:0042585;germinal vesicle;0.0498836885151662
|sample_id=11876
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=NFE2:5.13003383378;NFE2L2:4.60677030448;BACH2:4.41644240485;FOS_FOS{B,L1}_JUN{B,D}:4.35145032125;NFKB1_REL_RELA:4.31754647726;HLF:4.24338882403;PAX2:4.2344666616;FOSL2:4.14744146143;CEBPA,B_DDIT3:4.14389844293;FOXP3:3.46922304053;NFIL3:3.26233682624;IRF7:3.26216987558;IRF1,2:3.14829941173;SPIB:3.03975458272;PAX8:3.01110557405;ATF4:2.98321573661;SPI1:2.94849236334;ATF5_CREB3:2.9173725348;NANOG{mouse}:2.57351889015;STAT2,4,6:2.51866887149;DMAP1_NCOR{1,2}_SMARC:2.5047271161;ETS1,2:2.50238869847;SREBF1,2:2.30513241659;PDX1:2.21896401105;CREB1:2.17510509106;FOXN1:2.0676003809;JUN:2.03882457034;NFATC1..3:2.02309650926;NFE2L1:1.94110963617;ATF6:1.87192883279;RUNX1..3:1.73169277637;HSF1,2:1.66320765254;ATF2:1.63082088608;PAX3,7:1.51837272107;HMGA1,2:1.45060271619;NR1H4:1.44438751317;STAT5{A,B}:1.38773239782;ALX1:1.34699202614;RXRA_VDR{dimer}:1.2614769455;ALX4:1.17921111619;CDX1,2,4:1.10948781441;HOXA9_MEIS1:1.00967383463;MAFB:0.971013111361;XBP1:0.926097320005;ELF1,2,4:0.907835157541;POU2F1..3:0.843186364973;GLI1..3:0.797906512522;PRDM1:0.746539784472;OCT4_SOX2{dimer}:0.704218038463;HMX1:0.674918350135;TGIF1:0.650516278435;TBP:0.617998056752;STAT1,3:0.5673083719;ZBTB16:0.496347592473;TLX2:0.487097514754;EP300:0.427507640819;SRF:0.367882269062;IKZF1:0.356485879606;TFCP2:0.342037029628;EN1,2:0.308310340986;EGR1..3:0.266804460551;HOX{A5,B5}:0.217757066773;POU5F1:0.160221033724;POU3F1..4:0.138521949528;PPARG:0.116303266985;SMAD1..7,9:0.0356948883926;BPTF:0.00434491393031;RBPJ:-0.000585089833589;FOXL1:-0.153634901508;HIF1A:-0.225559028116;PAX1,9:-0.235278932146;NANOG:-0.251492662416;FOXM1:-0.25633025016;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.271850967348;GATA4:-0.28288623445;PAX4:-0.302521548225;AHR_ARNT_ARNT2:-0.324120585541;HBP1_HMGB_SSRP1_UBTF:-0.342765621073;NR3C1:-0.397693915546;PITX1..3:-0.400517514734;ESR1:-0.453810774993;FOXO1,3,4:-0.462931910063;IKZF2:-0.49845769323;VSX1,2:-0.57555095961;SOX2:-0.589904492153;MZF1:-0.642654100871;NKX3-1:-0.644820318605;FOX{D1,D2}:-0.70413572708;FOXD3:-0.704707709688;HES1:-0.720068503955;DBP:-0.723963199026;POU6F1:-0.741870296335;MEF2{A,B,C,D}:-0.757974840609;HNF4A_NR2F1,2:-0.812801827663;RORA:-0.831143901083;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.832292023062;MYB:-0.83453940664;PAX6:-0.877781204641;NHLH1,2:-0.89000639397;MED-1{core}:-0.911457266039;MYFfamily:-0.988671262599;TFDP1:-0.992264232868;RFX2..5_RFXANK_RFXAP:-0.995024358495;NFIX:-1.05486616837;CDC5L:-1.05488954419;NR6A1:-1.08481085591;HNF1A:-1.111943451;REST:-1.15963418325;ZNF384:-1.1758835181;FOXA2:-1.17915707351;TAL1_TCF{3,4,12}:-1.18176670545;TBX4,5:-1.21896872076;FOXP1:-1.22333553354;TFAP2B:-1.22428638393;PRRX1,2:-1.25683442768;ZFP161:-1.26478866875;MTE{core}:-1.28079855833;HOX{A4,D4}:-1.31895209329;SOX{8,9,10}:-1.31920020461;CRX:-1.33555779042;ADNP_IRX_SIX_ZHX:-1.36753906322;NKX6-1,2:-1.37091291689;TFAP4:-1.40331881561;ZNF238:-1.42076323961;PATZ1:-1.4538246653;SPZ1:-1.46703002523;GATA6:-1.48882607004;FOX{F1,F2,J1}:-1.49137734189;SOX5:-1.49648431405;BREu{core}:-1.51091230691;RXR{A,B,G}:-1.51214040131;TLX1..3_NFIC{dimer}:-1.54911469911;E2F1..5:-1.5505846453;ZBTB6:-1.55590003854;XCPE1{core}:-1.55857738984;NKX2-2,8:-1.56506577399;TEAD1:-1.57390845747;HOX{A6,A7,B6,B7}:-1.58170279305;TFAP2{A,C}:-1.58412895397;ZNF148:-1.60197594094;RREB1:-1.62743833935;GZF1:-1.68418707511;GTF2I:-1.70630297093;ONECUT1,2:-1.71323778245;NKX3-2:-1.74158436605;CUX2:-1.76820644953;GCM1,2:-1.77230150389;GTF2A1,2:-1.79514821096;MTF1:-1.80444839411;T:-1.82967620202;SP1:-1.9146259035;TEF:-1.93625981271;NKX2-3_NKX2-5:-1.93886536426;ZEB1:-2.01708416733;HIC1:-2.03305967926;MAZ:-2.08199146761;POU1F1:-2.10911024185;ESRRA:-2.11658060868;RFX1:-2.14971220595;AIRE:-2.15532984405;GFI1B:-2.15738694246;TP53:-2.15784197595;ELK1,4_GABP{A,B1}:-2.17344837198;MYBL2:-2.18820688795;KLF4:-2.22917500314;UFEwm:-2.23361581457;SNAI1..3:-2.25754887691;NR5A1,2:-2.36030223122;ZNF423:-2.39975957179;MYOD1:-2.49916315498;FOXQ1:-2.50721564498;bHLH_family:-2.53832183966;NKX2-1,4:-2.59127596563;EBF1:-2.59607719922;NFY{A,B,C}:-2.62265542255;SOX17:-2.62390228031;LMO2:-2.73541527366;EVI1:-2.81460077657;ZIC1..3:-2.87784807097;PBX1:-2.88167779347;TOPORS:-2.88746143105;LHX3,4:-2.89021899222;PAX5:-3.00448264383;GFI1:-3.02426869387;AR:-3.0971012699;NRF1:-3.16812127436;YY1:-3.2044360547;FOX{I1,J2}:-3.24254898982;LEF1_TCF7_TCF7L1,2:-3.71949673252;ZNF143:-3.75203606195;ARID5B:-3.92793781542;HAND1,2:-3.98510134869
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11876-125C4;search_select_hide=table117:FF:11876-125C4
}}
}}

Latest revision as of 18:25, 4 June 2020

Name:CD14+ monocytes - treated with Salmonella, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13485
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age51
cell typemonocyte
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberD4-7
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004857
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13485 CAGE DRX008154 DRR009026
Accession ID Hg19

Library idBAMCTSS
CNhs13485 DRZ000451 DRZ001836
Accession ID Hg38

Library idBAMCTSS
CNhs13485 DRZ011801 DRZ013186
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.743
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0802
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.644
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.493
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.195
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.644
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.108
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.6
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.329
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0.514
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.384
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.489
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.159
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.786
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.329
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.329
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.421
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.329
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.246
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.584
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.782
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0.329
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.708
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.584
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.429
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.936
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.556
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.612
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.697
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0.392
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.195
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.705
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.908
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.195
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.536
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.195
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.514
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.329
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.329
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.657
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.195
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.195
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.195
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.195
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.195
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13485

Jaspar motifP-value
MA0002.22.32847e-6
MA0003.10.649
MA0004.10.454
MA0006.10.956
MA0007.10.854
MA0009.10.339
MA0014.10.935
MA0017.10.108
MA0018.20.113
MA0019.10.556
MA0024.10.00266
MA0025.10.00553
MA0027.10.616
MA0028.10.0555
MA0029.10.167
MA0030.10.0638
MA0031.10.221
MA0035.20.33
MA0038.10.457
MA0039.20.545
MA0040.10.433
MA0041.10.401
MA0042.10.852
MA0043.18.04194e-8
MA0046.10.0189
MA0047.20.255
MA0048.10.667
MA0050.13.01727e-12
MA0051.12.08086e-7
MA0052.10.265
MA0055.10.614
MA0057.10.453
MA0058.10.224
MA0059.10.267
MA0060.11.19623e-9
MA0061.12.40271e-18
MA0062.20.961
MA0065.20.0277
MA0066.10.102
MA0067.11.67368e-5
MA0068.10.312
MA0069.10.798
MA0070.10.0307
MA0071.10.401
MA0072.10.595
MA0073.10.425
MA0074.10.134
MA0076.10.078
MA0077.10.357
MA0078.10.599
MA0079.20.227
MA0080.27.19344e-12
MA0081.13.7545e-4
MA0083.10.488
MA0084.10.612
MA0087.10.924
MA0088.10.37
MA0090.10.41
MA0091.10.851
MA0092.10.352
MA0093.10.47
MA0099.22.57155e-45
MA0100.10.52
MA0101.11.65064e-21
MA0102.21.16203e-9
MA0103.10.0778
MA0104.20.518
MA0105.12.41957e-20
MA0106.10.816
MA0107.14.76023e-27
MA0108.20.435
MA0111.10.606
MA0112.25.21024e-4
MA0113.10.964
MA0114.10.122
MA0115.10.824
MA0116.13.9741e-4
MA0117.10.0534
MA0119.10.165
MA0122.10.616
MA0124.10.391
MA0125.10.32
MA0131.10.333
MA0135.10.571
MA0136.19.09405e-12
MA0137.20.0637
MA0138.20.322
MA0139.10.689
MA0140.10.402
MA0141.10.138
MA0142.10.415
MA0143.10.89
MA0144.10.0271
MA0145.10.492
MA0146.10.412
MA0147.10.635
MA0148.10.507
MA0149.10.195
MA0150.12.68334e-23
MA0152.10.875
MA0153.10.00192
MA0154.12.84265e-4
MA0155.10.988
MA0156.19.7226e-8
MA0157.10.794
MA0159.10.0384
MA0160.10.067
MA0162.10.884
MA0163.12.10327e-8
MA0164.10.477
MA0258.10.0241
MA0259.10.537



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13485

Novel motifP-value
10.112
100.0294
1000.767
1010.903
1020.893
1030.291
1040.572
1050.14
1061.08982e-4
1070.136
1080.754
1090.371
110.175
1100.214
1110.106
1120.428
1130.48
1140.0304
1150.242
1160.962
1170.0704
1180.22
1190.152
120.288
1200.986
1210.774
1220.625
1230.513
1240.577
1250.215
1260.235
1270.573
1280.0475
1290.459
130.139
1300.245
1310.793
1320.109
1330.782
1340.542
1350.724
1360.801
1370.0269
1380.387
1390.129
140.563
1400.31
1410.24
1420.167
1430.026
1440.487
1450.435
1460.631
1470.743
1480.00489
1490.793
150.183
1500.282
1510.574
1520.223
1530.645
1540.615
1550.99
1560.862
1570.443
1580.0309
1590.245
160.366
1600.387
1610.474
1620.172
1630.118
1640.107
1650.17
1660.874
1670.322
1680.119
1690.0253
170.202
180.0895
190.593
20.6
200.205
210.66
220.32
230.0296
240.387
250.532
260.0621
270.567
280.327
290.355
30.131
300.464
310.773
320.543
330.246
340.663
350.13
360.0945
370.067
380.385
390.778
40.943
400.234
410.0165
420.341
430.0182
440.605
450.606
460.174
470.67
480.55
490.132
50.379
500.957
510.535
520.295
530.575
540.446
550.67
560.715
570.82
580.173
590.183
60.805
600.0395
610.653
620.085
630.535
640.538
650.195
660.347
670.501
680.683
690.318
70.299
700.0433
710.0322
720.244
730.179
740.0341
750.184
760.157
770.405
780.128
790.926
80.402
800.218
810.347
820.231
830.0263
840.0432
850.0233
860.0312
870.472
880.741
890.146
90.292
900.0988
910.387
920.247
930.786
940.108
950.652
960.349
970.589
980.173
990.0659



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13485


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000633 (Salmonella treatment sample)
0011109 (human CD14-positive monocytes - treated with Salmonella sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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