FFCP PHASE1:Mm9::chr18:74224599..74224617,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:74224599..74224617,- to FFCP PHASE1:Mm9::chr18:74224599..74224617,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=225724 | |EntrezGene=225724 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q4X9,Q6P5G0 | |UniProt=E9Q4X9,Q6P5G0 | ||
|association_with_transcript=0bp_to_ENSMUST00000025442,NM_172632,uc008fpb.1_5end | |||
|cluster_id=chr18:74224599..74224617,- | |||
|description=CAGE_peak_2_at_Mapk4_5end | |||
|id=chr18:74224599..74224617,- | |||
|ontology_enrichment_celltype=CL:0002319!9.94e-14!43;CL:0000221!2.29e-13!44;CL:0000133!2.29e-13!44;CL:0000540!1.99e-11!33;CL:0000047!1.99e-11!33;CL:0000031!1.99e-11!33;CL:0000404!1.99e-11!33;CL:0000117!3.91e-11!23;CL:0000337!3.91e-11!23;CL:0000055!1.53e-10!50;CL:0000393!6.87e-09!39;CL:0000211!6.87e-09!39;CL:0002321!2.35e-07!70;CL:0000220!2.35e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.95e-14,43;CL:0000117,1.10e-13,23;CL:0000337,1.10e-13,23;CL:0000221,3.78e-13,44;CL:0000133,3.78e-13,44;CL:0000540,3.99e-12,33;CL:0000047,3.99e-12,33;CL:0000031,3.99e-12,33;CL:0000404,3.99e-12,33;CL:0000393,1.22e-08,39;CL:0000211,1.22e-08,39;CL:0002321,1.45e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.19e-31!73;UBERON:0005743!8.19e-31!73;UBERON:0000073!4.62e-30!75;UBERON:0001016!4.62e-30!75;UBERON:0004121!2.61e-26!102;UBERON:0000924!2.61e-26!102;UBERON:0006601!2.61e-26!102;UBERON:0001049!2.66e-25!52;UBERON:0005068!2.66e-25!52;UBERON:0006241!2.66e-25!52;UBERON:0007135!2.66e-25!52;UBERON:0000955!4.18e-24!50;UBERON:0006238!4.18e-24!50;UBERON:0000033!1.92e-23!63;UBERON:0002616!2.39e-23!49;UBERON:0002346!2.91e-23!71;UBERON:0003075!2.91e-23!71;UBERON:0007284!2.91e-23!71;UBERON:0002020!1.50e-19!34;UBERON:0003056!7.77e-19!49;UBERON:0003080!2.61e-18!40;UBERON:0002780!1.02e-17!39;UBERON:0001890!1.02e-17!39;UBERON:0006240!1.02e-17!39;UBERON:0002791!8.63e-17!29;UBERON:0003528!8.63e-17!29;UBERON:0001893!8.63e-17!29;UBERON:0000956!5.65e-13!21;UBERON:0001869!5.65e-13!21;UBERON:0000203!5.65e-13!21;UBERON:0002619!2.34e-11!17;UBERON:0007811!6.54e-09!86;UBERON:0000153!2.62e-08!94;UBERON:0002021!3.30e-08!10;UBERON:0000411!3.30e-08!10;UBERON:0001950!3.30e-08!10;UBERON:0003076!1.43e-07!12;UBERON:0003057!1.43e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.70e-33,73;UBERON:0001016,7.56e-32,75;UBERON:0000073,6.97e-31,54;UBERON:0004121,1.15e-29,95;UBERON:0000924,1.15e-29,95;UBERON:0006601,1.15e-29,95;UBERON:0002346,1.30e-29,64;UBERON:0003075,1.30e-29,64;UBERON:0007284,1.30e-29,64;UBERON:0001049,1.41e-29,52;UBERON:0005068,1.41e-29,52;UBERON:0006241,1.41e-29,52;UBERON:0007135,1.41e-29,52;UBERON:0000955,4.81e-26,47;UBERON:0006238,4.81e-26,47;UBERON:0010371,7.10e-26,73;UBERON:0002616,4.08e-25,46;UBERON:0002020,2.33e-24,34;UBERON:0003056,5.40e-21,49;UBERON:0003528,7.44e-21,29;UBERON:0002791,7.44e-21,29;UBERON:0001893,7.44e-21,29;UBERON:0003080,7.79e-21,40;UBERON:0002780,4.23e-20,39;UBERON:0001890,4.23e-20,39;UBERON:0006240,4.23e-20,39;UBERON:0000956,5.12e-16,21;UBERON:0001869,5.12e-16,21;UBERON:0000203,5.12e-16,21;UBERON:0010314,1.60e-14,92;UBERON:0002619,5.75e-14,17;UBERON:0002021,5.55e-10,10;UBERON:0000411,5.55e-10,10;UBERON:0001950,5.55e-10,10;UBERON:0003076,3.55e-09,12;UBERON:0003057,3.55e-09,12 | |||
|phase1_expression=0.640595388419176,3.48975407639361,8.64498554840118,1.81478526784098,2.00358291978539,2.01455126294268,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,1.27993938234725,1.60586496747019,8.03924749761028,2.58457197695445,3.878482188346,5.32065574477847,2.77233142735924,2.66076612786366,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,4.69434806608824,6.5407546914134,3.73466510648602,4.86074747685709,5.03951117851305,1.43752564364972,0,0,0,0.771778308107841,0.85960031981627,0.515672092277442,2.63011399117477,4.23192783417626,1.90149421051854,1.35537812827653,0,0,0,0,0.898800331555214,2.68952813725088,3.52544681848824,3.10513658162888,2.10324961351382,5.14171771926846,5.96345060569357,3.1847607795888,3.83381884072945,4.5960939330501,2.20231761998777,7.15049093277051,6.29786786350598,3.29715719325485,2.28719109006024,2.6045668527838,3.90856198601933,6.19038871034848,6.87592114995646,7.07108605136802,4.9830088279686,3.91438836233131,0.227178579999552,0.831287161174641,0.289864488701678,0,1.3599426674155,0.539703191637817,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,1.7127581957859,0,0.445326417194474,0.173485326766136,0,0.691846491768175,0.452167921657868,0.940709657085638,0.502666365318702,0.741584903203122,0.289198713839823,0,0,0,0,0,4.39171195517321,7.74952815209784,2.04365644166873,0.239630249011841,0,0.127070227073065,5.99162557619291,10.5225138648284,4.52355667606312,9.21268897019065,10.4843337505436,5.40248915854856,8.92326946872667,1.73126918545538,0.373220911830279,0.252722758433675,0.420883711772948,1.04096354370163,1.14951052216736,2.34080768746954,0.452114453507145,2.85753296435577,2.17793324484245,2.62364828767241,1.29351685369508,0,0.378212160335639,1.05570674498369,1.31517439456545,0.834141747676794,1.0447564995665,0.823128545631774,1.79130840136644,0,0.257347907114715,0,0,0,0.36012412292203,0.23674473558521,0.590292695242212,0,0.465067889500816,1.07309360559848,0.700592054203017,0.329119699826961,0.656669856316381,0.810688095458557,0.438599962275997,1.09775057645525,0.939444931322602,6.51898840548794,5.14523061896422,0,0.528901133327089,0,0,0.38660238396628,1.21010114774006,0.889512175379481,0.380451252225118,2.84717436926707,0.658795818896044,0.754005626400808,0.596869416123452,0.974820435595601,0.898819408654221,1.29682829924817,0.995706366271836,1.13800740571849,1.25673363870702,2.25415471346161,1.01825663922657,1.35766741017338,2.10407459670956,3.16182685621286,3.39503340353085,2.82597710114475,2.96153193412321,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0.195133647857799,0.315270288212382,0,1.43509291791738,0.491589944147214,0.172684981865896,0.289298117163023,0,0,8.85175691434265,7.72622889653251,4.33486592967038,5.27452589664914,0,0.252470927204373,2.2085575359138,1.56175497718655,0.646270193198397,1.43381278771531,0.445597348164788,1.98153571552183,2.42886421004937,0.876767573733936,1.97643888973262,10.2822821254978,0.283880170416537,0.178065603667255,1.62886959353576,1.48473110675282,0,0.485561272309963,0,0,0.590603785761546,0.614870295887855,1.03371317267288,1.09060118843252,0,0.632073515871632,0,0,0.680879211507576,1.26042765821917,1.68166288917581,2.14337035031592,0.532020700926821,1.78368817602071,0.987294123612726,1.2178597964584,0,0.42366414172764,0,0,0.484393280087717,0.241251699712623,0.119372344003136,0,0.291480836629851,5.7481843623258,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.609958401380546,0.216010681643603,0.627264888043406,0.218362563746178,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,3.72803587852155,0,1.34564891439581,1.32366792365678,1.16670713006429,1.54991788173277,0.506868376472335,1.87771581833206,3.77592716047455,1.36317147753424,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,2.44184548711471,0.538283139656854,1.34307693091263,0.579568782096571,1.31377732815827,1.09890974560359,0.428736758158132,0,12.4245405375755,8.74617949363636,9.73922372846974,9.6237782112465,10.2762377965596,9.82012066606611,14.8504950050997,9.45674526770863,12.2348450425735,9.83744592328458,0.726511433089237,1.19707462020309,1.36586884603307,1.45864030240976,0.628839487883947,0.735374033800057,0.222246727801615,1.23621034343337,0.320919209591815,0.505394423527595,0,1.32038438970253,1.03005658216871,1.28050304809739,1.14870937911227,3.33405583898152,0.347652977834566,1.35036454324594,1.23625770240992,0.735994600671987,0,0.70990322463735,0.715308569841963,1.0174249164263,0.564656282491984,0.507687647350059,1.28049581010941,1.05227884575137,0.679020569229309,0,1.18635018124174,0.591026894253381,1.63692417267876,1.70430525304563,0.964533054905707,1.49886346762768,0.701794825336225,0.859484216193193,0.765153328275374,0.882365676478062,0.463735671240843 | |phase1_expression=0.640595388419176,3.48975407639361,8.64498554840118,1.81478526784098,2.00358291978539,2.01455126294268,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,1.27993938234725,1.60586496747019,8.03924749761028,2.58457197695445,3.878482188346,5.32065574477847,2.77233142735924,2.66076612786366,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,4.69434806608824,6.5407546914134,3.73466510648602,4.86074747685709,5.03951117851305,1.43752564364972,0,0,0,0.771778308107841,0.85960031981627,0.515672092277442,2.63011399117477,4.23192783417626,1.90149421051854,1.35537812827653,0,0,0,0,0.898800331555214,2.68952813725088,3.52544681848824,3.10513658162888,2.10324961351382,5.14171771926846,5.96345060569357,3.1847607795888,3.83381884072945,4.5960939330501,2.20231761998777,7.15049093277051,6.29786786350598,3.29715719325485,2.28719109006024,2.6045668527838,3.90856198601933,6.19038871034848,6.87592114995646,7.07108605136802,4.9830088279686,3.91438836233131,0.227178579999552,0.831287161174641,0.289864488701678,0,1.3599426674155,0.539703191637817,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,1.7127581957859,0,0.445326417194474,0.173485326766136,0,0.691846491768175,0.452167921657868,0.940709657085638,0.502666365318702,0.741584903203122,0.289198713839823,0,0,0,0,0,4.39171195517321,7.74952815209784,2.04365644166873,0.239630249011841,0,0.127070227073065,5.99162557619291,10.5225138648284,4.52355667606312,9.21268897019065,10.4843337505436,5.40248915854856,8.92326946872667,1.73126918545538,0.373220911830279,0.252722758433675,0.420883711772948,1.04096354370163,1.14951052216736,2.34080768746954,0.452114453507145,2.85753296435577,2.17793324484245,2.62364828767241,1.29351685369508,0,0.378212160335639,1.05570674498369,1.31517439456545,0.834141747676794,1.0447564995665,0.823128545631774,1.79130840136644,0,0.257347907114715,0,0,0,0.36012412292203,0.23674473558521,0.590292695242212,0,0.465067889500816,1.07309360559848,0.700592054203017,0.329119699826961,0.656669856316381,0.810688095458557,0.438599962275997,1.09775057645525,0.939444931322602,6.51898840548794,5.14523061896422,0,0.528901133327089,0,0,0.38660238396628,1.21010114774006,0.889512175379481,0.380451252225118,2.84717436926707,0.658795818896044,0.754005626400808,0.596869416123452,0.974820435595601,0.898819408654221,1.29682829924817,0.995706366271836,1.13800740571849,1.25673363870702,2.25415471346161,1.01825663922657,1.35766741017338,2.10407459670956,3.16182685621286,3.39503340353085,2.82597710114475,2.96153193412321,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0.195133647857799,0.315270288212382,0,1.43509291791738,0.491589944147214,0.172684981865896,0.289298117163023,0,0,8.85175691434265,7.72622889653251,4.33486592967038,5.27452589664914,0,0.252470927204373,2.2085575359138,1.56175497718655,0.646270193198397,1.43381278771531,0.445597348164788,1.98153571552183,2.42886421004937,0.876767573733936,1.97643888973262,10.2822821254978,0.283880170416537,0.178065603667255,1.62886959353576,1.48473110675282,0,0.485561272309963,0,0,0.590603785761546,0.614870295887855,1.03371317267288,1.09060118843252,0,0.632073515871632,0,0,0.680879211507576,1.26042765821917,1.68166288917581,2.14337035031592,0.532020700926821,1.78368817602071,0.987294123612726,1.2178597964584,0,0.42366414172764,0,0,0.484393280087717,0.241251699712623,0.119372344003136,0,0.291480836629851,5.7481843623258,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.609958401380546,0.216010681643603,0.627264888043406,0.218362563746178,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,3.72803587852155,0,1.34564891439581,1.32366792365678,1.16670713006429,1.54991788173277,0.506868376472335,1.87771581833206,3.77592716047455,1.36317147753424,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,2.44184548711471,0.538283139656854,1.34307693091263,0.579568782096571,1.31377732815827,1.09890974560359,0.428736758158132,0,12.4245405375755,8.74617949363636,9.73922372846974,9.6237782112465,10.2762377965596,9.82012066606611,14.8504950050997,9.45674526770863,12.2348450425735,9.83744592328458,0.726511433089237,1.19707462020309,1.36586884603307,1.45864030240976,0.628839487883947,0.735374033800057,0.222246727801615,1.23621034343337,0.320919209591815,0.505394423527595,0,1.32038438970253,1.03005658216871,1.28050304809739,1.14870937911227,3.33405583898152,0.347652977834566,1.35036454324594,1.23625770240992,0.735994600671987,0,0.70990322463735,0.715308569841963,1.0174249164263,0.564656282491984,0.507687647350059,1.28049581010941,1.05227884575137,0.679020569229309,0,1.18635018124174,0.591026894253381,1.63692417267876,1.70430525304563,0.964533054905707,1.49886346762768,0.701794825336225,0.859484216193193,0.765153328275374,0.882365676478062,0.463735671240843 | ||
|short_description=p2@Mapk4 | |||
}} | }} |
Latest revision as of 17:16, 1 October 2015
Short description: | p2@Mapk4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mapk4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000025442, NM_172632, uc008fpb.1_5end |
EntrezGene: | Mapk4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.95e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.10e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-13 | 23 |
ectodermal cell | 3.78e-13 | 44 |
neurectodermal cell | 3.78e-13 | 44 |
neuron | 3.99e-12 | 33 |
neuronal stem cell | 3.99e-12 | 33 |
neuroblast | 3.99e-12 | 33 |
electrically signaling cell | 3.99e-12 | 33 |
electrically responsive cell | 1.22e-08 | 39 |
electrically active cell | 1.22e-08 | 39 |
embryonic cell | 1.45e-07 | 70 |