FFCP PHASE1:Mm9::chr2:87366179..87366201,+: Difference between revisions
From FANTOM5_SSTAR
m moved FFCP PHASE1 mm9::chr2:87366179..87366201,+ to FFCP PHASE1:Mm9::chr2:87366179..87366201,+: NSchange |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2036 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-99bp_to_ENSMUST00000167296_5end | |||
|cluster_id=chr2:87366179..87366201,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000167296_5end | |||
|id=chr2:87366179..87366201,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.62e-31!50;CL:0000221!3.90e-28!44;CL:0000133!3.90e-28!44;CL:0002319!1.19e-27!43;CL:0000393!7.26e-23!39;CL:0000211!7.26e-23!39;CL:0002321!7.40e-21!70;CL:0000220!7.40e-21!70;CL:0000540!4.76e-20!33;CL:0000047!4.76e-20!33;CL:0000031!4.76e-20!33;CL:0000404!4.76e-20!33;CL:0002371!4.22e-19!118;CL:0000034!6.35e-19!97;CL:0000144!9.16e-19!121;CL:0000012!9.16e-19!121;CL:0000548!1.01e-18!115;CL:0000004!1.01e-18!115;CL:0000255!1.01e-18!115;CL:0000723!1.62e-18!91;CL:0000048!1.62e-18!91;CL:0000117!1.92e-14!23;CL:0000337!1.92e-14!23;CL:0000333!2.49e-08!10;CL:0000095!2.49e-08!10;CL:0000243!2.49e-08!10;CL:0000123!2.49e-08!10;CL:0000125!2.49e-08!10;CL:0000030!2.49e-08!10;CL:0000339!2.49e-08!10;CL:0002453!3.84e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.05e-60,43;CL:0000221,8.64e-59,44;CL:0000133,8.64e-59,44;CL:0002321,2.91e-44,70;CL:0000393,7.54e-44,39;CL:0000211,7.54e-44,39;CL:0000540,3.45e-43,33;CL:0000047,3.45e-43,33;CL:0000031,3.45e-43,33;CL:0000404,3.45e-43,33;CL:0000723,9.36e-31,91;CL:0000048,9.36e-31,91;CL:0000117,1.63e-30,23;CL:0000337,1.63e-30,23;CL:0000034,4.00e-28,97;CL:0000333,9.40e-17,10;CL:0000095,9.40e-17,10;CL:0000243,9.40e-17,10;CL:0000123,9.40e-17,10;CL:0000125,9.40e-17,10;CL:0000030,9.40e-17,10;CL:0000339,9.40e-17,10;CL:0002453,4.27e-14,8;CL:0000107,3.72e-12,9;CL:0000128,3.58e-11,6;CL:0000126,3.58e-11,6;CL:0000127,3.58e-11,6;CL:0002609,8.97e-09,6;CL:0000219,3.11e-08,54;CL:0002092,8.36e-07,3;CL:0002540,8.36e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.29e-14!75;UBERON:0001016!4.29e-14!75;UBERON:0001017!5.18e-13!73;UBERON:0005743!5.18e-13!73;UBERON:0004121!4.46e-09!102;UBERON:0000924!4.46e-09!102;UBERON:0006601!4.46e-09!102;UBERON:0000010!1.81e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.30e-30,75;UBERON:0001017,1.77e-27,73;UBERON:0004121,2.56e-21,95;UBERON:0000924,2.56e-21,95;UBERON:0006601,2.56e-21,95;UBERON:0000010,7.96e-15,11;UBERON:0002410,3.72e-12,9;UBERON:0002020,4.66e-12,34;UBERON:0000073,2.66e-11,54;UBERON:0001049,2.17e-08,52;UBERON:0005068,2.17e-08,52;UBERON:0006241,2.17e-08,52;UBERON:0007135,2.17e-08,52;UBERON:0002346,2.37e-08,64;UBERON:0003075,2.37e-08,64;UBERON:0007284,2.37e-08,64;UBERON:0003528,1.34e-07,29;UBERON:0002791,1.34e-07,29;UBERON:0001893,1.34e-07,29;UBERON:0001948,1.76e-07,5;UBERON:0002315,1.76e-07,5;UBERON:0010371,2.63e-07,73;UBERON:0011216,6.66e-07,194 | |||
|phase1_expression=1.28119077683835,0,0,0,0.500895729946347,0.16787927191189,0,0.387369970324729,0.563154888606667,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.315462165358238,0.274228867211478,0,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,8.25539875497521,4.30545351309199,0,0,0.166234645358492,0,0.418531630736908,0.7813353445238,0,0,0,0,0.503587271902309,0.202753862439029,0.367093504323363,28.1660883965294,19.4042389178597,19.552070263368,19.0541301092798,18.6181940761732,21.5628846547457,0,0,0,24.182386987379,18.6246735960192,14.9544906760458,9.91350658212029,12.6957835025288,5.07065122804943,18.9752937958714,22.2323699027785,30.1466405289269,35.5991890524111,24.1563239081674,17.3768064100675,16.9056054341484,7.98410014775278,14.0406175864958,12.6194976810829,8.2838785477103,12.1477697523387,9.92175473641128,8.72193786265951,12.8690630125403,31.9336054898227,11.4918604276669,16.5895055916743,9.62769900430415,6.22115976496386,5.73004707612436,17.588528937087,19.1339287410771,13.7518422999129,14.7314292736834,9.8236459751381,8.94717339961443,11.510381386644,15.7188845022114,0,2.58127163094416,34.6785380190953,25.9057531986152,0,0.448026887097336,0,0.170430322578058,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0.252722758433675,0,0.260240885925407,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0,0,0.848725428875941,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.468846746368813,21.6394127897212,0.252470927204373,10.4117712407365,12.1036010731958,11.2020166821055,10.2756583119597,9.13474563737816,7.35998980050964,12.5491317519217,8.18316402151673,14.6256477840214,0,0.283880170416537,0.35613120733451,0,0,0,0,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.329098041204242,0,0,0,0.441056796109924,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0.341741761595705,0,0,0.376736914009382,0,0,0.169978429993855,0.139951452323658,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0,0,0.448549638131936,0.330916980914195,0,0.258319646955462,0,0.352071715937262,0,0.104859344425711,0.241584120826006,0.864090018773596,0,0,0.308132871494482,0.389762468933385,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.384847366561318,0,0,0.221985953374065,0.448569283047378,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=1.28119077683835,0,0,0,0.500895729946347,0.16787927191189,0,0.387369970324729,0.563154888606667,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.315462165358238,0.274228867211478,0,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,8.25539875497521,4.30545351309199,0,0,0.166234645358492,0,0.418531630736908,0.7813353445238,0,0,0,0,0.503587271902309,0.202753862439029,0.367093504323363,28.1660883965294,19.4042389178597,19.552070263368,19.0541301092798,18.6181940761732,21.5628846547457,0,0,0,24.182386987379,18.6246735960192,14.9544906760458,9.91350658212029,12.6957835025288,5.07065122804943,18.9752937958714,22.2323699027785,30.1466405289269,35.5991890524111,24.1563239081674,17.3768064100675,16.9056054341484,7.98410014775278,14.0406175864958,12.6194976810829,8.2838785477103,12.1477697523387,9.92175473641128,8.72193786265951,12.8690630125403,31.9336054898227,11.4918604276669,16.5895055916743,9.62769900430415,6.22115976496386,5.73004707612436,17.588528937087,19.1339287410771,13.7518422999129,14.7314292736834,9.8236459751381,8.94717339961443,11.510381386644,15.7188845022114,0,2.58127163094416,34.6785380190953,25.9057531986152,0,0.448026887097336,0,0.170430322578058,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0.252722758433675,0,0.260240885925407,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0,0,0.848725428875941,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.468846746368813,21.6394127897212,0.252470927204373,10.4117712407365,12.1036010731958,11.2020166821055,10.2756583119597,9.13474563737816,7.35998980050964,12.5491317519217,8.18316402151673,14.6256477840214,0,0.283880170416537,0.35613120733451,0,0,0,0,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.329098041204242,0,0,0,0.441056796109924,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0.341741761595705,0,0,0.376736914009382,0,0,0.169978429993855,0.139951452323658,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0,0,0.448549638131936,0.330916980914195,0,0.258319646955462,0,0.352071715937262,0,0.104859344425711,0.241584120826006,0.864090018773596,0,0,0.308132871494482,0.389762468933385,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.384847366561318,0,0,0.221985953374065,0.448569283047378,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p1@ENSMUST00000167296 | |||
}} | }} | ||
Latest revision as of 14:36, 5 August 2015
| Short description: | p1@ENSMUST00000167296 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ENSMUST00000167296_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2036 |
| Association with transcript: | -99bp_to_ENSMUST00000167296_5end |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 2.05e-60 | 43 |
| ectodermal cell | 8.64e-59 | 44 |
| neurectodermal cell | 8.64e-59 | 44 |
| embryonic cell | 2.91e-44 | 70 |
| electrically responsive cell | 7.54e-44 | 39 |
| electrically active cell | 7.54e-44 | 39 |
| neuron | 3.45e-43 | 33 |
| neuronal stem cell | 3.45e-43 | 33 |
| neuroblast | 3.45e-43 | 33 |
| electrically signaling cell | 3.45e-43 | 33 |
| somatic stem cell | 9.36e-31 | 91 |
| multi fate stem cell | 9.36e-31 | 91 |
| CNS neuron (sensu Vertebrata) | 1.63e-30 | 23 |
| neuroblast (sensu Vertebrata) | 1.63e-30 | 23 |
| stem cell | 4.00e-28 | 97 |
| migratory neural crest cell | 9.40e-17 | 10 |
| neuron associated cell | 9.40e-17 | 10 |
| glial cell (sensu Vertebrata) | 9.40e-17 | 10 |
| neuron associated cell (sensu Vertebrata) | 9.40e-17 | 10 |
| glial cell | 9.40e-17 | 10 |
| glioblast | 9.40e-17 | 10 |
| glioblast (sensu Vertebrata) | 9.40e-17 | 10 |
| oligodendrocyte precursor cell | 4.27e-14 | 8 |
| autonomic neuron | 3.72e-12 | 9 |
| oligodendrocyte | 3.58e-11 | 6 |
| macroglial cell | 3.58e-11 | 6 |
| astrocyte | 3.58e-11 | 6 |
| neuron of cerebral cortex | 8.97e-09 | 6 |
| motile cell | 3.11e-08 | 54 |
| bone marrow cell | 8.36e-07 | 3 |
| mesenchymal stem cell of the bone marrow | 8.36e-07 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 6.30e-30 | 75 |
| central nervous system | 1.77e-27 | 73 |
| ectoderm-derived structure | 2.56e-21 | 95 |
| ectoderm | 2.56e-21 | 95 |
| presumptive ectoderm | 2.56e-21 | 95 |
| peripheral nervous system | 7.96e-15 | 11 |
| autonomic nervous system | 3.72e-12 | 9 |
| gray matter | 4.66e-12 | 34 |
| regional part of nervous system | 2.66e-11 | 54 |
| neural tube | 2.17e-08 | 52 |
| neural rod | 2.17e-08 | 52 |
| future spinal cord | 2.17e-08 | 52 |
| neural keel | 2.17e-08 | 52 |
| neurectoderm | 2.37e-08 | 64 |
| neural plate | 2.37e-08 | 64 |
| presumptive neural plate | 2.37e-08 | 64 |
| brain grey matter | 1.34e-07 | 29 |
| regional part of telencephalon | 1.34e-07 | 29 |
| telencephalon | 1.34e-07 | 29 |
| regional part of spinal cord | 1.76e-07 | 5 |
| gray matter of spinal cord | 1.76e-07 | 5 |
| ecto-epithelium | 2.63e-07 | 73 |
| organ system subdivision | 6.66e-07 | 194 |