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FFCP PHASE1:Mm9::chr4:133054453..133054471,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:133054453..133054471,-
|DHSsupport=NA
|short_description=p2@Trnp1
|DPIdataset=NA
|description=CAGE_peak_2_at_Trnp1_5end
|association_with_transcript=0bp_to_ENSMUST00000125541,NM_001081156,uc008vcu.1_5end
|EntrezGene=69539
|EntrezGene=69539
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80ZI1
|UniProt=Q80ZI1
|association_with_transcript=0bp_to_ENSMUST00000125541,NM_001081156,uc008vcu.1_5end
|cluster_id=chr4:133054453..133054471,-
|description=CAGE_peak_2_at_Trnp1_5end
|id=chr4:133054453..133054471,-
|ontology_enrichment_celltype=CL:0000055!6.88e-14!50;CL:0000393!1.47e-13!39;CL:0000211!1.47e-13!39;CL:0000221!1.79e-13!44;CL:0000133!1.79e-13!44;CL:0002319!7.02e-13!43;CL:0000540!1.04e-11!33;CL:0000047!1.04e-11!33;CL:0000031!1.04e-11!33;CL:0000404!1.04e-11!33;CL:0000117!1.72e-11!23;CL:0000337!1.72e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000393,2.51e-14,39;CL:0000211,2.51e-14,39;CL:0000221,5.94e-14,44;CL:0000133,5.94e-14,44;CL:0002319,2.58e-13,43;CL:0000117,1.99e-12,23;CL:0000337,1.99e-12,23;CL:0000540,2.64e-12,33;CL:0000047,2.64e-12,33;CL:0000031,2.64e-12,33;CL:0000404,2.64e-12,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.80e-31!102;UBERON:0000924!1.80e-31!102;UBERON:0006601!1.80e-31!102;UBERON:0000073!7.07e-30!75;UBERON:0001016!7.07e-30!75;UBERON:0001017!5.16e-29!73;UBERON:0005743!5.16e-29!73;UBERON:0000033!3.33e-26!63;UBERON:0001049!4.45e-24!52;UBERON:0005068!4.45e-24!52;UBERON:0006241!4.45e-24!52;UBERON:0007135!4.45e-24!52;UBERON:0002346!6.45e-24!71;UBERON:0003075!6.45e-24!71;UBERON:0007284!6.45e-24!71;UBERON:0000955!1.61e-23!50;UBERON:0006238!1.61e-23!50;UBERON:0002616!7.58e-23!49;UBERON:0003056!1.22e-18!49;UBERON:0003080!8.77e-18!40;UBERON:0002780!3.97e-17!39;UBERON:0001890!3.97e-17!39;UBERON:0006240!3.97e-17!39;UBERON:0002020!1.19e-16!34;UBERON:0002791!4.34e-14!29;UBERON:0003528!4.34e-14!29;UBERON:0001893!4.34e-14!29;UBERON:0007811!1.07e-13!86;UBERON:0000153!7.45e-13!94;UBERON:0000956!8.23e-11!21;UBERON:0001869!8.23e-11!21;UBERON:0000203!8.23e-11!21;UBERON:0002619!7.85e-09!17;UBERON:0000468!2.62e-07!333;UBERON:0003076!6.58e-07!12;UBERON:0003057!6.58e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.87e-34,95;UBERON:0000924,6.87e-34,95;UBERON:0006601,6.87e-34,95;UBERON:0001016,9.29e-32,75;UBERON:0001017,8.13e-31,73;UBERON:0010371,1.05e-27,73;UBERON:0000073,1.49e-27,54;UBERON:0002346,7.27e-27,64;UBERON:0003075,7.27e-27,64;UBERON:0007284,7.27e-27,64;UBERON:0001049,8.12e-26,52;UBERON:0005068,8.12e-26,52;UBERON:0006241,8.12e-26,52;UBERON:0007135,8.12e-26,52;UBERON:0000955,9.91e-23,47;UBERON:0006238,9.91e-23,47;UBERON:0002616,5.15e-22,46;UBERON:0003056,8.96e-20,49;UBERON:0003080,2.60e-19,40;UBERON:0010314,7.29e-19,92;UBERON:0002780,1.36e-18,39;UBERON:0001890,1.36e-18,39;UBERON:0006240,1.36e-18,39;UBERON:0002020,4.50e-18,34;UBERON:0003528,2.87e-15,29;UBERON:0002791,2.87e-15,29;UBERON:0001893,2.87e-15,29;UBERON:0000956,1.11e-11,21;UBERON:0001869,1.11e-11,21;UBERON:0000203,1.11e-11,21;UBERON:0002619,1.62e-09,17;UBERON:0002021,3.35e-07,10;UBERON:0000411,3.35e-07,10;UBERON:0001950,3.35e-07,10;UBERON:0003076,4.83e-07,12;UBERON:0003057,4.83e-07,12
|phase1_expression=75.5902558334627,0.348975407639361,0,0,0.500895729946347,0.33575854382378,0.467225281191051,0,0.281577444303333,0,0,0,4.96482116800497,0.0874204024189974,0,0.202475267389826,6.99561878128147,0.157731082679119,0.137114433605739,0,11.8210173309987,0,0,0.159992422793407,0,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66535680890098,4.1564541800001,2.0190142737785,75.1095690574118,0.65407546914134,3.29529274101708,3.4997381833371,11.198913730029,1.43752564364972,0,0,0.336093799142464,6.43148590089868,23.2092086350393,13.4074743992135,7.48570905180512,6.34789175126439,5.70448263155561,14.2314703469035,15.1180115338894,0.899899717281399,1.97773272513395,0,2.39680088414724,1.15265491596466,20.7379224616955,21.8709620097339,28.1835448210852,42.5619966761667,29.8172530284678,10.0442455356262,4.88811902193005,10.1114066527102,124.430945529309,83.2521444315424,80.7970364927841,4.08847491963601,3.65950574409639,3.12548022334056,81.5214357084032,33.2029939918691,42.63071112973,22.0971439105251,19.2201769078789,7.64237727883732,5.45228591998925,5.81901012822248,0,0,0.679971333707751,0,0,0,5.33688796500657,0.170430322578058,0,0,52.6754389964785,0,0,0,0.216491041011214,0.506719730950197,0,1.48439043634778,0.517875767294343,1.7813056687779,0.693941307064543,3.04465478312141,0.922461989024234,1.20578112442098,1.76383060703557,0.753999547978053,2.71914464507811,1.3013942122792,0,0.485300549842228,0.220841518460394,0.484875253135222,5.59175283654366,40.110969190582,44.8215952580794,1.53274233125155,0,0,0,52.8760957099024,67.7100892171567,9.5497307605777,27.4642425903797,43.9830586608169,72.9336036404056,62.6251275441545,1.12023300235348,0.870848794270651,1.51633655060205,18.7293251738962,0.910843100738926,1.60931473103431,1.44049703844279,2.86339153887859,2.99360596265843,3.45907044769094,4.02917415606834,53.8103011137153,0.646703978798527,1.51284864134255,1.23165786914764,1.7535658594206,1.39023624612799,1.0447564995665,1.23469281844766,0.796137067273973,0,0,0,0.828503090142008,0,0.180062061461015,0.710234206755631,0.393528463494808,0.617068451549513,0.930135779001631,1.07309360559848,1.63471479314037,0.329119699826961,0.492502392237286,0.486412857275134,0.292399974850665,0.878200461164203,1.47627060636409,37.0110309472864,12.2456488731348,0,1.05780226665418,0.213288250535234,1.85789337488351,1.03093969057675,0.605050573870028,1.33426826306922,1.71203063501303,2.37264530772256,2.30578536613615,1.75934646160189,3.18330355265841,1.55971269695296,1.79763881730844,2.80979464837102,3.58454291857861,0.569003702859245,0.456994050438915,0,0.203651327845314,0.387904974335251,0.561086559122548,0.189709611372772,0.738050739898011,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0.50925170356284,0.287696137450811,1.29708181420028,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0.476087281772027,0.390267295715598,0.788175720530955,0.664394068946325,0.318909537314974,1.14704320301017,0.518054945597687,1.15719246865209,0,0,1.47529281905711,2.75936746304733,82.0413514837617,72.2023989407972,1.14754461763673,0.504941854408746,3.15508219416257,3.51394869866975,2.80050417052639,0.716906393857656,2.22798674082394,1.13230612315533,2.83367491172426,4.09158201075837,2.76701444562566,42.7357350841003,1.13552068166615,1.6025904330053,1.14020871547503,1.31976098378028,1.32745138339963,0,0,0.377210159511796,0.885905678642318,0.614870295887855,0.775284879504663,1.09060118843252,0,1.58018378967908,0,2.06271086496374,5.7874732978144,1.26042765821917,2.8458910432206,5.78709994585299,2.6601035046341,9.63191615051181,12.6702745863633,16.4411072521884,0.469343416127421,0.21183207086382,2.20528398054962,0.65954501176592,1.61464426695906,1.74907482291652,3.10368094408155,3.93938159388147,2.33184669303881,68.2365111398676,0,0,0,0,0,0,0,0,0,2.86401185404534,0.790839983952838,1.21991680276109,0.972048067396211,0.836353184057875,1.9652630737156,2.69728692769641,2.72756403893609,4.18809507174447,5.70305882483889,1.86401793926078,0,0.149516546043979,0.496375471371293,0.777804753376191,1.29159823477731,1.18269287843545,0.938857909166032,1.69265700297135,3.25063967719704,1.44950472495604,0.576060012515731,0,1.21635129174099,1.43795340030758,1.55904987573354,0.716106782669926,0.79472541912506,0.600977247599844,0.295379054349154,0.201932899896295,0.381034033274999,0.201652370273681,0.487289403698762,0.0962118416403295,0.584384510907845,5.44152920676507,0.665957860122194,0.62799699626633,1.51096154727671,13.7164611762855,14.8269155606434,0.915758121336325,2.35805216986972,1.00314420807073,38.9678771405776,35.9053684475598,34.9466263198032,38.1514064802986,26.0331357512844,26.4387864086395,31.7260575108949,22.516060161211,28.0948293570207,32.1011393286128,1.03787347584177,0.399024873401031,1.70733605754134,1.21553358534147,4.19226325255965,4.41224420280034,3.11145418922261,2.47242068686673,5.13470735346904,2.52697211763797,3.54871019846336,2.45214243801899,3.93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|short_description=p2@Trnp1
}}
}}

Latest revision as of 11:26, 26 September 2015

Short description:p2@Trnp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trnp1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000125541, NM_001081156, uc008vcu.1_5end
EntrezGene:Trnp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trnp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G775.59
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B775.11
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.43
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.87
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F142.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3124.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F383.25
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D780.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E481.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I642.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D95.45
Mouse Schwann, donor2.CNhs12573.11746-123F95.82
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G652.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B240.11
cerebellum, neonate N30.CNhs11135.1395-42I244.82
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A452.88
corpus striatum, adult.CNhs10487.19-21D867.71
corpus striatum, neonate N00.CNhs11226.630-43F19.55
cortex, adult.CNhs10473.12-14D527.46
cortex, neonate N30.CNhs11107.1392-42F243.98
diencephalon, adult.CNhs10482.20-12F272.93
diencephalon, neonate N30.CNhs11201.1388-42B262.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G418.73
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A253.81
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E837.01
hippocampus, neonate N00.CNhs11228.627-43G112.25
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C282.04
medulla oblongata, neonate N30.CNhs11200.1396-42A372.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I942.74
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F69.63
pituitary gland, embryo E17.CNhs11039.1265-44F512.67
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I53.10
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C968.24
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I15.70
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E413.72
uterus, adult pregnant day19.CNhs10497.590-15F514.83
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.97
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.09
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.10
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell2.51e-1439
electrically active cell2.51e-1439
ectodermal cell5.94e-1444
neurectodermal cell5.94e-1444
neural cell2.58e-1343
CNS neuron (sensu Vertebrata)1.99e-1223
neuroblast (sensu Vertebrata)1.99e-1223
neuron2.64e-1233
neuronal stem cell2.64e-1233
neuroblast2.64e-1233
electrically signaling cell2.64e-1233

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure6.87e-3495
ectoderm6.87e-3495
presumptive ectoderm6.87e-3495
nervous system9.29e-3275
central nervous system8.13e-3173
ecto-epithelium1.05e-2773
regional part of nervous system1.49e-2754
neurectoderm7.27e-2764
neural plate7.27e-2764
presumptive neural plate7.27e-2764
neural tube8.12e-2652
neural rod8.12e-2652
future spinal cord8.12e-2652
neural keel8.12e-2652
brain9.91e-2347
future brain9.91e-2347
regional part of brain5.15e-2246
pre-chordal neural plate8.96e-2049
anterior neural tube2.60e-1940
structure with developmental contribution from neural crest7.29e-1992
regional part of forebrain1.36e-1839
forebrain1.36e-1839
future forebrain1.36e-1839
gray matter4.50e-1834
brain grey matter2.87e-1529
regional part of telencephalon2.87e-1529
telencephalon2.87e-1529
cerebral cortex1.11e-1121
cerebral hemisphere1.11e-1121
pallium1.11e-1121
regional part of cerebral cortex1.62e-0917
occipital lobe3.35e-0710
visual cortex3.35e-0710
neocortex3.35e-0710
posterior neural tube4.83e-0712
chordal neural plate4.83e-0712
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