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FFCP PHASE1:Mm9::chr4:48598120..48598140,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:48598120..48598140,+
|DHSsupport=NA
|short_description=p5@Tmeff1
|DPIdataset=NA
|description=CAGE_peak_5_at_Tmeff1_5end
|association_with_transcript=55bp_to_ENSMUST00000107703,NM_021436,uc008svk.1,uc008svl.1_5end
|EntrezGene=230157
|EntrezGene=230157
|HGNC=
|HGNC=
|MCL_coexpression_id=2275
|TSSclassifier=NA
|UniProt=Q6PFE7
|UniProt=Q6PFE7
|association_with_transcript=55bp_to_ENSMUST00000107703,NM_021436,uc008svk.1,uc008svl.1_5end
|cluster_id=chr4:48598120..48598140,+
|description=CAGE_peak_5_at_Tmeff1_5end
|id=chr4:48598120..48598140,+
|ontology_enrichment_celltype=CL:0000540!7.59e-18!33;CL:0000047!7.59e-18!33;CL:0000031!7.59e-18!33;CL:0000404!7.59e-18!33;CL:0000117!6.50e-16!23;CL:0000337!6.50e-16!23;CL:0000393!1.58e-13!39;CL:0000211!1.58e-13!39;CL:0002319!4.33e-12!43;CL:0000221!5.61e-12!44;CL:0000133!5.61e-12!44;CL:0000055!6.61e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.90e-28,23;CL:0000337,1.90e-28,23;CL:0000540,6.35e-23,33;CL:0000047,6.35e-23,33;CL:0000031,6.35e-23,33;CL:0000404,6.35e-23,33;CL:0000393,3.67e-18,39;CL:0000211,3.67e-18,39;CL:0002319,9.63e-16,43;CL:0000221,3.29e-15,44;CL:0000133,3.29e-15,44;CL:0002609,4.59e-09,6;CL:0002321,6.84e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.23e-20!73;UBERON:0005743!2.23e-20!73;UBERON:0000073!3.93e-20!75;UBERON:0001016!3.93e-20!75;UBERON:0002346!9.57e-19!71;UBERON:0003075!9.57e-19!71;UBERON:0007284!9.57e-19!71;UBERON:0004121!7.20e-18!102;UBERON:0000924!7.20e-18!102;UBERON:0006601!7.20e-18!102;UBERON:0001049!2.67e-16!52;UBERON:0005068!2.67e-16!52;UBERON:0006241!2.67e-16!52;UBERON:0007135!2.67e-16!52;UBERON:0003056!5.09e-16!49;UBERON:0000033!1.15e-15!63;UBERON:0002020!6.65e-15!34;UBERON:0002616!3.41e-14!49;UBERON:0000955!1.77e-13!50;UBERON:0006238!1.77e-13!50;UBERON:0003080!3.08e-13!40;UBERON:0002780!8.13e-13!39;UBERON:0001890!8.13e-13!39;UBERON:0006240!8.13e-13!39;UBERON:0002791!1.31e-11!29;UBERON:0003528!1.31e-11!29;UBERON:0001893!1.31e-11!29;UBERON:0000956!1.58e-07!21;UBERON:0001869!1.58e-07!21;UBERON:0000203!1.58e-07!21;UBERON:0000153!5.71e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.31e-26,64;UBERON:0003075,1.31e-26,64;UBERON:0007284,1.31e-26,64;UBERON:0002020,9.38e-26,34;UBERON:0003056,1.66e-22,49;UBERON:0010371,7.58e-22,73;UBERON:0001017,1.17e-21,73;UBERON:0004121,1.56e-21,95;UBERON:0000924,1.56e-21,95;UBERON:0006601,1.56e-21,95;UBERON:0000073,6.32e-21,54;UBERON:0001016,9.15e-21,75;UBERON:0001049,3.68e-20,52;UBERON:0005068,3.68e-20,52;UBERON:0006241,3.68e-20,52;UBERON:0007135,3.68e-20,52;UBERON:0003528,2.82e-19,29;UBERON:0002791,2.82e-19,29;UBERON:0001893,2.82e-19,29;UBERON:0003080,2.31e-17,40;UBERON:0002780,1.38e-16,39;UBERON:0001890,1.38e-16,39;UBERON:0006240,1.38e-16,39;UBERON:0010314,6.48e-15,92;UBERON:0002616,4.34e-14,46;UBERON:0000955,1.26e-13,47;UBERON:0006238,1.26e-13,47;UBERON:0000956,4.07e-12,21;UBERON:0001869,4.07e-12,21;UBERON:0000203,4.07e-12,21;UBERON:0002240,8.44e-09,6;UBERON:0005174,8.44e-09,6;UBERON:0001137,8.44e-09,6;UBERON:0002420,1.19e-08,8;UBERON:0007245,1.19e-08,8;UBERON:0010009,1.19e-08,8;UBERON:0010011,1.19e-08,8;UBERON:0000454,1.19e-08,8;UBERON:0001948,3.55e-08,5;UBERON:0002315,3.55e-08,5;UBERON:0002619,4.63e-08,17
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,6.47412674750713,7.93486468908049,6.97214543856797,0,0,0,0,0,0,0.384218305321555,3.11068836925433,3.10513658162888,2.3135745748652,3.14216082844184,2.42955395046775,3.79721477566358,2.77951865952885,3.67687514644008,3.30347642998166,1.91531007127782,0.921639199537461,7.91317726381163,9.42322729104819,9.89735404057844,1.95428099300967,2.25105044012672,1.06958773443767,5.00868595305235,4.55589378557129,6.89677949553612,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.649473123033642,0.760079596425296,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0.127070227073065,1.19832511523858,0.457500602818626,4.14659361972453,1.56441888173049,0.511430914660661,0.62336413367868,1.46017136760982,0.407357455401265,0,0,0,1.17108398666433,1.60931473103431,2.88099407688559,2.26057226753573,2.04109497453984,1.15302348256365,1.12442069471675,0.517406741478031,1.5089759505299,0.945530400839096,1.05570674498369,0.657587197282725,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0.703578179943289,0.900310307305074,0.710234206755631,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,0.841159794256509,6.07137213037778,0,0,1.70630600428187,0.464473343720877,0.77320476793256,0.605050573870028,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0.420814919341911,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0.372140947668503,0,0.505157755894224,0,0,0,0.568474235311454,0.977789858652155,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0.80275294993896,0.937693492737625,0.819674726883377,0,0.631016438832513,1.56175497718655,1.07711698866399,0.477937595905104,0.891194696329576,0.849229592366497,0.404810701674894,2.04579100537918,0.790575555893047,0,0,0.712262414669021,0.162886959353576,0,0,0.971122544619926,0,0.565815239267694,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,1.08036656418786,1.4229455216103,0.857348140126369,0.886701168211368,0.535106452806212,0.658196082408484,0.304464949114599,0.23467170806371,0.63549621259146,0.220528398054962,0,0.161464426695906,0.241251699712623,0,0.164140899745061,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,2.05618395827738,0.406638934253697,0.324016022465404,0.209088296014469,0,0.539457385539283,0.330613822901344,0,0,0,5.07323644815771,0.897099276263873,0.496375471371293,0.777804753376191,1.16243841129958,0.844780627453891,0.352071715937262,0.39061315453185,0.943734099831398,0.966336483304024,7.20075015644664,0,0.202725215290164,0.513554785824136,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0.887943813496259,0.269141569828427,0.839423081820392,0,0,0,0,0,2.25900737046827,1.84130094602871,2.86447756719698,3.43706364687375,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0,1.55328093525546,1.3492355185943,2.79317411380722,1.87806966329548,1.21553358534147,0.838452650511929,0.367687016900028,1.11123363900808,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,0.565879024158229,0.749132059759059,1.15245274328765,0.804096565378586,0.476293691283074,0.695305955669133,0.77163688185482,0.412085900803307,0.883193520806384,1.02860775715625,1.4198064492747,0.238436189947321,0.872078499793971,0.752875043322645,1.26921911837515,1.46342378298218,0.789209134313529,1.35804113845862,2.24456908663095,0.830445126869219,1.28055827088233,0.818462086339379,0.619747364743864,0.578719832943424,1.74867404556562,0.467863216890817,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,6.47412674750713,7.93486468908049,6.97214543856797,0,0,0,0,0,0,0.384218305321555,3.11068836925433,3.10513658162888,2.3135745748652,3.14216082844184,2.42955395046775,3.79721477566358,2.77951865952885,3.67687514644008,3.30347642998166,1.91531007127782,0.921639199537461,7.91317726381163,9.42322729104819,9.89735404057844,1.95428099300967,2.25105044012672,1.06958773443767,5.00868595305235,4.55589378557129,6.89677949553612,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.649473123033642,0.760079596425296,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0.127070227073065,1.19832511523858,0.457500602818626,4.14659361972453,1.56441888173049,0.511430914660661,0.62336413367868,1.46017136760982,0.407357455401265,0,0,0,1.17108398666433,1.60931473103431,2.88099407688559,2.26057226753573,2.04109497453984,1.15302348256365,1.12442069471675,0.517406741478031,1.5089759505299,0.945530400839096,1.05570674498369,0.657587197282725,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0.703578179943289,0.900310307305074,0.710234206755631,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,0.841159794256509,6.07137213037778,0,0,1.70630600428187,0.464473343720877,0.77320476793256,0.605050573870028,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0.420814919341911,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0.372140947668503,0,0.505157755894224,0,0,0,0.568474235311454,0.977789858652155,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0.80275294993896,0.937693492737625,0.819674726883377,0,0.631016438832513,1.56175497718655,1.07711698866399,0.477937595905104,0.891194696329576,0.849229592366497,0.404810701674894,2.04579100537918,0.790575555893047,0,0,0.712262414669021,0.162886959353576,0,0,0.971122544619926,0,0.565815239267694,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,1.08036656418786,1.4229455216103,0.857348140126369,0.886701168211368,0.535106452806212,0.658196082408484,0.304464949114599,0.23467170806371,0.63549621259146,0.220528398054962,0,0.161464426695906,0.241251699712623,0,0.164140899745061,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,2.05618395827738,0.406638934253697,0.324016022465404,0.209088296014469,0,0.539457385539283,0.330613822901344,0,0,0,5.07323644815771,0.897099276263873,0.496375471371293,0.777804753376191,1.16243841129958,0.844780627453891,0.352071715937262,0.39061315453185,0.943734099831398,0.966336483304024,7.20075015644664,0,0.202725215290164,0.513554785824136,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0.887943813496259,0.269141569828427,0.839423081820392,0,0,0,0,0,2.25900737046827,1.84130094602871,2.86447756719698,3.43706364687375,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0,1.55328093525546,1.3492355185943,2.79317411380722,1.87806966329548,1.21553358534147,0.838452650511929,0.367687016900028,1.11123363900808,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,0.565879024158229,0.749132059759059,1.15245274328765,0.804096565378586,0.476293691283074,0.695305955669133,0.77163688185482,0.412085900803307,0.883193520806384,1.02860775715625,1.4198064492747,0.238436189947321,0.872078499793971,0.752875043322645,1.26921911837515,1.46342378298218,0.789209134313529,1.35804113845862,2.24456908663095,0.830445126869219,1.28055827088233,0.818462086339379,0.619747364743864,0.578719832943424,1.74867404556562,0.467863216890817,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421
|short_description=p5@Tmeff1
}}
}}

Latest revision as of 01:54, 27 September 2015

Short description:p5@Tmeff1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tmeff1_5end
Coexpression cluster:MCL_coexpression_mm9:2275
Association with transcript: 55bp_to_ENSMUST00000107703, NM_021436, uc008svk.1, uc008svl.1_5end
EntrezGene:Tmeff1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Tmeff1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.90
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G16.07
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.31e-2664
neural plate1.31e-2664
presumptive neural plate1.31e-2664
gray matter9.38e-2634
pre-chordal neural plate1.66e-2249
ecto-epithelium7.58e-2273
central nervous system1.17e-2173
ectoderm-derived structure1.56e-2195
ectoderm1.56e-2195
presumptive ectoderm1.56e-2195
regional part of nervous system6.32e-2154
nervous system9.15e-2175
neural tube3.68e-2052
neural rod3.68e-2052
future spinal cord3.68e-2052
neural keel3.68e-2052
brain grey matter2.82e-1929
regional part of telencephalon2.82e-1929
telencephalon2.82e-1929
anterior neural tube2.31e-1740
regional part of forebrain1.38e-1639
forebrain1.38e-1639
future forebrain1.38e-1639
structure with developmental contribution from neural crest6.48e-1592
regional part of brain4.34e-1446
brain1.26e-1347
future brain1.26e-1347
cerebral cortex4.07e-1221
cerebral hemisphere4.07e-1221
pallium4.07e-1221
spinal cord8.44e-096
dorsal region element8.44e-096
dorsum8.44e-096
basal ganglion1.19e-088
nuclear complex of neuraxis1.19e-088
aggregate regional part of brain1.19e-088
collection of basal ganglia1.19e-088
cerebral subcortex1.19e-088
regional part of spinal cord3.55e-085
gray matter of spinal cord3.55e-085
regional part of cerebral cortex4.63e-0817
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