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FFCP PHASE1:Mm9::chr6:85978714..85978732,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:85978714..85978732,+
|DHSsupport=NA
|short_description=p1@Add2
|DPIdataset=NA
|description=CAGE_peak_1_at_Add2_5end
|association_with_transcript=0bp_to_uc009crc.1,uc009crd.1,uc009cre.1,uc009crf.1_5end
|EntrezGene=11519
|EntrezGene=11519
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q9QYB8
|UniProt=Q9QYB8
|association_with_transcript=0bp_to_uc009crc.1,uc009crd.1,uc009cre.1,uc009crf.1_5end
|cluster_id=chr6:85978714..85978732,+
|description=CAGE_peak_1_at_Add2_5end
|id=chr6:85978714..85978732,+
|ontology_enrichment_celltype=CL:0000540!1.28e-15!33;CL:0000047!1.28e-15!33;CL:0000031!1.28e-15!33;CL:0000404!1.28e-15!33;CL:0000117!6.30e-14!23;CL:0000337!6.30e-14!23;CL:0000393!2.26e-13!39;CL:0000211!2.26e-13!39;CL:0000221!1.64e-12!44;CL:0000133!1.64e-12!44;CL:0002319!1.93e-12!43;CL:0000055!2.22e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-18,33;CL:0000047,2.94e-18,33;CL:0000031,2.94e-18,33;CL:0000404,2.94e-18,33;CL:0000117,3.01e-16,23;CL:0000337,3.01e-16,23;CL:0000393,2.38e-15,39;CL:0000211,2.38e-15,39;CL:0000221,4.49e-14,44;CL:0000133,4.49e-14,44;CL:0002319,5.52e-14,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.45e-30!102;UBERON:0000924!6.45e-30!102;UBERON:0006601!6.45e-30!102;UBERON:0000073!4.91e-29!75;UBERON:0001016!4.91e-29!75;UBERON:0001017!2.03e-28!73;UBERON:0005743!2.03e-28!73;UBERON:0002346!1.34e-26!71;UBERON:0003075!1.34e-26!71;UBERON:0007284!1.34e-26!71;UBERON:0000033!4.85e-24!63;UBERON:0001049!2.47e-22!52;UBERON:0005068!2.47e-22!52;UBERON:0006241!2.47e-22!52;UBERON:0007135!2.47e-22!52;UBERON:0000955!1.59e-21!50;UBERON:0006238!1.59e-21!50;UBERON:0003056!1.64e-21!49;UBERON:0002616!6.39e-21!49;UBERON:0002020!5.90e-19!34;UBERON:0003080!1.93e-18!40;UBERON:0002780!6.70e-18!39;UBERON:0001890!6.70e-18!39;UBERON:0006240!6.70e-18!39;UBERON:0002791!2.00e-16!29;UBERON:0003528!2.00e-16!29;UBERON:0001893!2.00e-16!29;UBERON:0000956!1.11e-11!21;UBERON:0001869!1.11e-11!21;UBERON:0000203!1.11e-11!21;UBERON:0007811!5.03e-10!86;UBERON:0002619!2.29e-09!17;UBERON:0002021!2.34e-08!10;UBERON:0000411!2.34e-08!10;UBERON:0001950!2.34e-08!10;UBERON:0000153!2.35e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.38e-33,75;UBERON:0004121,3.29e-32,95;UBERON:0000924,3.29e-32,95;UBERON:0006601,3.29e-32,95;UBERON:0001017,3.43e-32,73;UBERON:0002346,2.22e-30,64;UBERON:0003075,2.22e-30,64;UBERON:0007284,2.22e-30,64;UBERON:0010371,3.73e-27,73;UBERON:0000073,6.48e-27,54;UBERON:0001049,2.26e-25,52;UBERON:0005068,2.26e-25,52;UBERON:0006241,2.26e-25,52;UBERON:0007135,2.26e-25,52;UBERON:0003056,1.12e-24,49;UBERON:0002020,2.51e-22,34;UBERON:0000955,2.82e-22,47;UBERON:0006238,2.82e-22,47;UBERON:0002616,1.41e-21,46;UBERON:0003080,5.07e-21,40;UBERON:0002780,2.21e-20,39;UBERON:0001890,2.21e-20,39;UBERON:0006240,2.21e-20,39;UBERON:0003528,2.57e-19,29;UBERON:0002791,2.57e-19,29;UBERON:0001893,2.57e-19,29;UBERON:0010314,1.83e-18,92;UBERON:0000956,1.12e-13,21;UBERON:0001869,1.12e-13,21;UBERON:0000203,1.12e-13,21;UBERON:0002619,6.32e-11,17;UBERON:0002021,1.24e-09,10;UBERON:0000411,1.24e-09,10;UBERON:0001950,1.24e-09,10;UBERON:0002420,7.55e-07,8;UBERON:0007245,7.55e-07,8;UBERON:0010009,7.55e-07,8;UBERON:0010011,7.55e-07,8;UBERON:0000454,7.55e-07,8
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.246233781754,0,0,0,0,0,0,0,0,0,0,3.17515336729816,5.53558308826113,0,0,0.166234645358492,0,0,0,0,0,0,0,8.05739635043695,7.80602370390262,0.367093504323363,0,0.65407546914134,0,0.194429899074283,0.979904951377538,0,0,0,0,0,0,0.515672092277442,51.3883810583378,57.1310257613796,58.3124891225685,1.35537812827653,0,0,0,0,2.39680088414724,3.07374644257244,41.9942929849335,62.6427553859045,56.3670896421704,27.4224945027651,20.5407743085001,63.5727247925611,63.3538563430542,83.6489095815119,57.2602581196821,42.6475709204527,47.1572057096667,63.8329632614138,62.5775482240482,65.6350846901518,39.0856198601933,25.3243174514256,40.4915356608547,28.5789727909458,26.1963892670349,40.8214786357408,4.54357159999104,8.91744409260069,0.869593466105033,0,0,0,0,0,2.38755514223978,0,0,0,2.39433813620357,0,0,0,0.649473123033642,0.506719730950197,0,1.59857431606684,0,0.445326417194474,2.25530924795977,7.30717147949139,5.30415643688935,5.57673770044703,5.40908052824242,0.251333182659351,0.988779870937496,0,0,0,0.220841518460394,0.484875253135222,0,15.8101630386235,19.4785437336513,0.510914110417183,0,0,0,36.6987066541816,71.3700940397057,70.9947089437684,68.4867821557569,71.0888971378319,35.9473317088039,56.6222008106474,0.407357455401265,0.248813941220186,0,5.05060454127538,3.90361328888111,7.35686734187113,11.343914177737,11.3028613376786,13.1990808353576,9.09607414022434,9.55757590509234,11.9003550539947,0.862271971731369,0.945530400839096,0.879755620819744,0.876782929710299,0,0,0,0.398068533636986,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,1.18372367792605,0.393528463494808,0.617068451549513,0.232533944750408,0.804820204198858,0.583826711835847,0.329119699826961,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,94.6304768538573,64.6240965741906,4.62586296177317,0.264450566663544,1.91959425481711,1.62565670302307,1.54640953586512,1.21010114774006,1.55664630691409,1.33157938278791,0,2.30578536613615,1.00534083520108,0.795825888164603,0.779856348476481,0,0.432276099749388,1.1948476395262,1.13800740571849,1.48523066392647,0,1.4255592949172,0.193952487167626,1.05203729835478,0.822074982615345,0.885660887877613,0.31399745568275,0.493588655687202,0,0.500535317148282,0,0,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.162964976442026,0.509235257325564,0.469380496577004,0.335012514883631,0.238043640886014,0.585400943573396,0.630540576424764,1.32878813789265,0.318909537314974,0.163863314715738,0,0,0,0,0,0,38.3715910070823,36.1011994703986,0,0.252470927204373,3.78609863299508,7.80877488593277,9.90947629570875,3.82350076724083,7.5751549188014,8.77537245445381,5.26253912177363,9.35218745316198,7.51046778098395,48.5195187796929,0.851640511249612,0,0.488660878060728,0.659880491890142,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.922305443831782,0.516856586336442,0,0,0.948110273807448,0,0,8.85142974959849,4.50152735078276,4.13947788104814,0.857348140126369,2.48276327099183,3.21063871683727,4.93647061806363,5.78483403317739,3.98941903708308,4.66030555900404,1.32317038832977,1.31909002353184,0.161464426695906,0.0603129249281559,1.19372344003136,1.64140899745061,0.582961673259701,31.1514507377656,0,0.619160603889667,0,0,0,0,0,0,0,0.954670618015114,1.10717597753397,0.609958401380546,1.51207477150522,1.04544148007234,2.18362563746178,0.674321731924103,1.32245529160537,1.57053565190418,0.388844919875379,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.704143431874524,0.2604087696879,0.314578033277133,0.483168241652012,0,0,0.405450430580328,0,0.25984164595559,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0.563047426353546,16.6667978083211,4.07299920250225,0,93.184054031816,86.0808192268421,92.2361776637429,107.751945329492,88.3756450504129,99.7119944554405,83.7027900287439,71.1507501094268,67.9713613476307,86.9837323743057,6.74617759297148,8.37952234142165,11.2684179797729,8.50873509739029,9.22297915563122,10.4790799816508,8.88986911206461,8.24140228955577,5.77654577265267,8.84440241173291,9.37873409593887,7.73367999682912,7.58496210506047,8.89949618427683,7.3517400263185,7.1444053692461,8.92309309775387,6.75182271622968,6.1812885120496,7.21274708658547,7.54312355247914,8.16388708332953,7.62995807831427,5.66851024866081,9.78737556319438,7.61531471025089,8.78054269789308,4.99832451731901,8.69146328613515,13.4674145197857,8.30445126869219,8.47138548429846,6.13846564754534,8.2116525828562,4.62975866354739,18.9856039232839,6.31615342802603,8.16510005383534,3.06061331310149,1.10295709559758,1.85494268496337
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.246233781754,0,0,0,0,0,0,0,0,0,0,3.17515336729816,5.53558308826113,0,0,0.166234645358492,0,0,0,0,0,0,0,8.05739635043695,7.80602370390262,0.367093504323363,0,0.65407546914134,0,0.194429899074283,0.979904951377538,0,0,0,0,0,0,0.515672092277442,51.3883810583378,57.1310257613796,58.3124891225685,1.35537812827653,0,0,0,0,2.39680088414724,3.07374644257244,41.9942929849335,62.6427553859045,56.3670896421704,27.4224945027651,20.5407743085001,63.5727247925611,63.3538563430542,83.6489095815119,57.2602581196821,42.6475709204527,47.1572057096667,63.8329632614138,62.5775482240482,65.6350846901518,39.0856198601933,25.3243174514256,40.4915356608547,28.5789727909458,26.1963892670349,40.8214786357408,4.54357159999104,8.91744409260069,0.869593466105033,0,0,0,0,0,2.38755514223978,0,0,0,2.39433813620357,0,0,0,0.649473123033642,0.506719730950197,0,1.59857431606684,0,0.445326417194474,2.25530924795977,7.30717147949139,5.30415643688935,5.57673770044703,5.40908052824242,0.251333182659351,0.988779870937496,0,0,0,0.220841518460394,0.484875253135222,0,15.8101630386235,19.4785437336513,0.510914110417183,0,0,0,36.6987066541816,71.3700940397057,70.9947089437684,68.4867821557569,71.0888971378319,35.9473317088039,56.6222008106474,0.407357455401265,0.248813941220186,0,5.05060454127538,3.90361328888111,7.35686734187113,11.343914177737,11.3028613376786,13.1990808353576,9.09607414022434,9.55757590509234,11.9003550539947,0.862271971731369,0.945530400839096,0.879755620819744,0.876782929710299,0,0,0,0.398068533636986,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,1.18372367792605,0.393528463494808,0.617068451549513,0.232533944750408,0.804820204198858,0.583826711835847,0.329119699826961,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,94.6304768538573,64.6240965741906,4.62586296177317,0.264450566663544,1.91959425481711,1.62565670302307,1.54640953586512,1.21010114774006,1.55664630691409,1.33157938278791,0,2.30578536613615,1.00534083520108,0.795825888164603,0.779856348476481,0,0.432276099749388,1.1948476395262,1.13800740571849,1.48523066392647,0,1.4255592949172,0.193952487167626,1.05203729835478,0.822074982615345,0.885660887877613,0.31399745568275,0.493588655687202,0,0.500535317148282,0,0,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.162964976442026,0.509235257325564,0.469380496577004,0.335012514883631,0.238043640886014,0.585400943573396,0.630540576424764,1.32878813789265,0.318909537314974,0.163863314715738,0,0,0,0,0,0,38.3715910070823,36.1011994703986,0,0.252470927204373,3.78609863299508,7.80877488593277,9.90947629570875,3.82350076724083,7.5751549188014,8.77537245445381,5.26253912177363,9.35218745316198,7.51046778098395,48.5195187796929,0.851640511249612,0,0.488660878060728,0.659880491890142,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.922305443831782,0.516856586336442,0,0,0.948110273807448,0,0,8.85142974959849,4.50152735078276,4.13947788104814,0.857348140126369,2.48276327099183,3.21063871683727,4.93647061806363,5.78483403317739,3.98941903708308,4.66030555900404,1.32317038832977,1.31909002353184,0.161464426695906,0.0603129249281559,1.19372344003136,1.64140899745061,0.582961673259701,31.1514507377656,0,0.619160603889667,0,0,0,0,0,0,0,0.954670618015114,1.10717597753397,0.609958401380546,1.51207477150522,1.04544148007234,2.18362563746178,0.674321731924103,1.32245529160537,1.57053565190418,0.388844919875379,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.704143431874524,0.2604087696879,0.314578033277133,0.483168241652012,0,0,0.405450430580328,0,0.25984164595559,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0.563047426353546,16.6667978083211,4.07299920250225,0,93.184054031816,86.0808192268421,92.2361776637429,107.751945329492,88.3756450504129,99.7119944554405,83.7027900287439,71.1507501094268,67.9713613476307,86.9837323743057,6.74617759297148,8.37952234142165,11.2684179797729,8.50873509739029,9.22297915563122,10.4790799816508,8.88986911206461,8.24140228955577,5.77654577265267,8.84440241173291,9.37873409593887,7.73367999682912,7.58496210506047,8.89949618427683,7.3517400263185,7.1444053692461,8.92309309775387,6.75182271622968,6.1812885120496,7.21274708658547,7.54312355247914,8.16388708332953,7.62995807831427,5.66851024866081,9.78737556319438,7.61531471025089,8.78054269789308,4.99832451731901,8.69146328613515,13.4674145197857,8.30445126869219,8.47138548429846,6.13846564754534,8.2116525828562,4.62975866354739,18.9856039232839,6.31615342802603,8.16510005383534,3.06061331310149,1.10295709559758,1.85494268496337
|short_description=p1@Add2
}}
}}

Latest revision as of 20:09, 1 October 2015

Short description:p1@Add2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Add2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_uc009crc.1, uc009crd.1, uc009cre.1, uc009crf.1_5end
EntrezGene:Add2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Add2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C351.39
Mouse Granule cells, donor2.CNhs12357.11731-123E357.13
Mouse Granule cells, donor3.CNhs12108.11636-122C758.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F562.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D956.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D263.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F263.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D683.65
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D357.26
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D747.16
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D463.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F462.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D865.64
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E439.09
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.58
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.20
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.82
Mouse Schwann, donor1.CNhs12507.11728-123D94.54
Mouse Schwann, donor2.CNhs12573.11746-123F98.92
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F55.58
adrenal gland, neonate N00.CNhs11191.1311-23C15.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.81
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A436.70
corpus striatum, adult.CNhs10487.19-21D871.37
corpus striatum, neonate N00.CNhs11226.630-43F170.99
cortex, adult.CNhs10473.12-14D568.49
cortex, neonate N30.CNhs11107.1392-42F271.09
diencephalon, adult.CNhs10482.20-12F235.95
diencephalon, neonate N30.CNhs11201.1388-42B256.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C911.34
eyeball, embryo E17.CNhs11023.1261-18D411.30
eyeball, neonate N00.CNhs11207.633-15C613.20
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G89.56
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E894.63
hippocampus, neonate N00.CNhs11228.627-43G164.62
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C238.37
medulla oblongata, neonate N30.CNhs11200.1396-42A336.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I948.52
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C931.15
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E516.67
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A193.18
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A286.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A392.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7107.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A488.38
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A599.71
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A683.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A771.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A867.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A986.98
whole body, embryo E11.CNhs11014.324-5I86.75
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H211.27
whole body, embryo E14.5.CNhs10578.420-27D28.51
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F210.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.47
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I518.99
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.94e-1833
neuronal stem cell2.94e-1833
neuroblast2.94e-1833
electrically signaling cell2.94e-1833
CNS neuron (sensu Vertebrata)3.01e-1623
neuroblast (sensu Vertebrata)3.01e-1623
electrically responsive cell2.38e-1539
electrically active cell2.38e-1539
ectodermal cell4.49e-1444
neurectodermal cell4.49e-1444
neural cell5.52e-1443

Uber anatomy
Ontology termp-valuen
nervous system6.38e-3375
ectoderm-derived structure3.29e-3295
ectoderm3.29e-3295
presumptive ectoderm3.29e-3295
central nervous system3.43e-3273
neurectoderm2.22e-3064
neural plate2.22e-3064
presumptive neural plate2.22e-3064
ecto-epithelium3.73e-2773
regional part of nervous system6.48e-2754
neural tube2.26e-2552
neural rod2.26e-2552
future spinal cord2.26e-2552
neural keel2.26e-2552
pre-chordal neural plate1.12e-2449
gray matter2.51e-2234
brain2.82e-2247
future brain2.82e-2247
regional part of brain1.41e-2146
anterior neural tube5.07e-2140
regional part of forebrain2.21e-2039
forebrain2.21e-2039
future forebrain2.21e-2039
brain grey matter2.57e-1929
regional part of telencephalon2.57e-1929
telencephalon2.57e-1929
structure with developmental contribution from neural crest1.83e-1892
cerebral cortex1.12e-1321
cerebral hemisphere1.12e-1321
pallium1.12e-1321
regional part of cerebral cortex6.32e-1117
occipital lobe1.24e-0910
visual cortex1.24e-0910
neocortex1.24e-0910
basal ganglion7.55e-078
nuclear complex of neuraxis7.55e-078
aggregate regional part of brain7.55e-078
collection of basal ganglia7.55e-078
cerebral subcortex7.55e-078
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