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FFCP PHASE1:Mm9::chr7:17428370..17428389,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:17428370..17428389,+
|DHSsupport=NA
|short_description=p5@Prkd2
|DPIdataset=NA
|description=CAGE_peak_5_at_Prkd2_5end
|association_with_transcript=-24bp_to_ENSMUST00000086104,NM_178900,uc009fih.1_5end
|EntrezGene=101540
|EntrezGene=101540
|HGNC=
|HGNC=
|MCL_coexpression_id=1721
|TSSclassifier=NA
|UniProt=Q8BZ03
|UniProt=Q8BZ03
|association_with_transcript=-24bp_to_ENSMUST00000086104,NM_178900,uc009fih.1_5end
|cluster_id=chr7:17428370..17428389,+
|description=CAGE_peak_5_at_Prkd2_5end
|id=chr7:17428370..17428389,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!3.82e-08!41;UBERON:0001004!4.44e-08!42;UBERON:0004177!6.57e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.71e-15,41;UBERON:0001004,6.79e-15,42;UBERON:0004177,1.51e-11,29;UBERON:0005057,1.51e-11,29;UBERON:0002370,2.47e-10,23;UBERON:0000974,2.47e-10,23;UBERON:0004807,2.47e-10,23;UBERON:0005058,2.47e-10,23;UBERON:0003351,2.47e-10,23;UBERON:0009113,2.47e-10,23;UBERON:0003295,2.47e-10,23;UBERON:0009722,2.47e-10,23;UBERON:0005562,2.47e-10,23;UBERON:0007690,2.47e-10,23;UBERON:0006562,1.11e-09,24;UBERON:0003408,1.11e-09,24;UBERON:0001557,1.11e-09,24;UBERON:0001042,1.11e-09,24;UBERON:0008814,1.11e-09,24;UBERON:0009145,1.11e-09,24;UBERON:0000077,1.77e-09,35;UBERON:0001041,2.00e-09,80;UBERON:0002048,5.55e-09,14;UBERON:0000117,5.55e-09,14;UBERON:0000171,5.55e-09,14;UBERON:0000170,5.55e-09,14;UBERON:0005597,5.55e-09,14;UBERON:0000118,5.55e-09,14;UBERON:0000153,1.79e-08,43;UBERON:0005911,4.28e-08,69;UBERON:0000072,5.01e-08,27;UBERON:0001048,5.40e-08,134;UBERON:0002193,6.76e-08,48;UBERON:0002405,6.76e-08,48;UBERON:0002390,8.06e-08,45;UBERON:0003061,8.06e-08,45;UBERON:0005153,8.40e-07,17;UBERON:0005178,8.40e-07,17;UBERON:0005181,8.40e-07,17;UBERON:0002224,8.40e-07,17;UBERON:0000915,8.40e-07,17;UBERON:0008947,8.40e-07,17;UBERON:0003258,8.40e-07,17
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,3.61545305636414,0.703943610758334,0.936258105287974,0.171217968225505,0,4.10881751834894,3.4968160967599,0,0.607425802169478,0,2.68142840554502,3.56497527374921,1.69755860719212,1.36069264241712,0.595745707205312,0.261199789138935,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0,1.67412652294763,0,0,0.588231488031014,2.04913645487534,0.971020706062307,0.881277725829041,0.506884656097573,0.367093504323363,2.34717403304412,0.218025156380447,0.439372365468944,0.58328969722285,0.55994568650145,0,2.68452169692378,3.62681071005672,6.72187598284928,0.514518872071894,0.286533439938757,0,0,1.5869729378161,0,0.677689064138264,0,0,0,0,0,0.768436610643109,0.622137673850866,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.383381884072945,0,0,0,0.307213066512487,0.131886287730194,0.274462930807229,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.745597783301202,0.075726193333184,0.0755715601067855,1.44932244350839,0.860423876981386,0,0,0,0,0.842666520790511,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,7.25026074212081,0.593768556259299,0.867426633830679,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0.502666365318702,0.247194967734374,0.86759614151947,0.884610551949874,0.323533699894818,0,0,0,0,0.41889341362691,0.255457055208591,0.838705871541442,0,0.254140454146129,0,0,0,0,0,0.41557608911912,0.162241263067758,0.712875546952214,0.870848794270651,0.758168275301024,0.210441855886474,0.780722657776222,0.229902104433473,0.720248519221397,0.30140963567143,0.680364991513279,1.40925092313335,0.562210347358373,1.03481348295606,1.94011193639558,0.945530400839096,2.11141348996739,1.97276159184817,2.50242524303038,1.74126083261083,0.823128545631774,1.39323986772945,0,0,0,1.03562886267751,0.938104239924385,1.2604344302271,1.65721314909647,0.393528463494808,1.07986979021165,1.16266972375204,0.804820204198858,0.934122738937356,0.493679549740441,0.656669856316381,0.891756905004413,0.730999937126662,1.3173006917463,0.402619256281115,0,0.617427674275707,0.330418782983798,0.528901133327089,0.426576501070468,1.16118335930219,1.15980715189884,0.201683524623343,1.33426826306922,0.760902504450237,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0,0.948339504765408,0.913988100877831,6.76246414038483,0.814605311381257,0.193952487167626,0.771494018793504,0.822074982615345,0.738050739898011,0.156998727841375,0.246794327843601,0.296452627087149,1.16791574001266,0.196558995113203,0.674586337154561,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0.252578877947112,0.179397413521912,0,2.03228509183265,0.947457058852424,1.30371981153621,1.01847051465113,1.64283173801951,1.00503754465089,1.19021820443007,2.34160377429359,3.15270288212382,2.87904096543407,1.11618338060241,1.47476983244164,1.38147985492716,1.73578870297814,0,0,0,0.827810238914197,0.321101179975584,0,0.163934945376675,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.955875191810208,0.891194696329576,0.283076530788832,0.404810701674894,0.584511715822624,0,0.321321316421807,1.27746076687442,1.06839362200353,0.488660878060728,0.989820737835213,0,0.728341908464944,0.604647113929502,0.188605079755898,1.18120757152309,1.53717573971964,0.258428293168221,0,0,0,0,0,0.340439605753788,1.26042765821917,0.905510786479282,1.50035924522115,2.30542303734956,1.24858172321449,0.987294123612726,0.608929898229199,0.704015124191131,0.21183207086382,0.220528398054962,0.65954501176592,0.807322133479528,0.904693873922338,0.119372344003136,0.492422699235184,0.582961673259701,0,1.70870880797853,1.44470807574256,1.11116716421827,0.376736914009382,1.6403307326523,0.686334519619568,0.849892149969277,1.11961161858926,0.552799895217695,0,1.26534397432454,0.609958401380546,0.86404272657441,0.209088296014469,0.87345025498471,1.07891477107857,0.495920734352016,0.785267825952089,0.388844919875379,0.621339313086926,0,0.448549638131936,0.496375471371293,0.388902376688095,0.774958940866387,0.844780627453891,0.821500670520278,0.2604087696879,0.104859344425711,0.241584120826006,0,7.58426689507628,1.01362607645082,1.43795340030758,1.42912905275575,4.29664069601955,6.15912199821921,3.24527713703916,4.43068581523732,5.14928894735553,5.71551049912499,6.15039729334727,8.38137774361871,6.15755786498109,5.72696820689688,0.226730383615211,0.665957860122194,0,0.503653849092235,0.579568782096571,0.563047426353546,0.36630324853453,0.643105137237198,0,0,0,0.572895513439397,0.515559547031063,0,0,0,0,0,0.51776031175182,1.86817225651518,3.59122386060928,0.512200817262403,0.972426868273176,0.628839487883947,0.919217542250071,0.44449345560323,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,0.754505365544305,0.280924522409647,1.28050304809739,0.746661096422973,1.42888107384922,0.695305955669133,0.77163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|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,3.61545305636414,0.703943610758334,0.936258105287974,0.171217968225505,0,4.10881751834894,3.4968160967599,0,0.607425802169478,0,2.68142840554502,3.56497527374921,1.69755860719212,1.36069264241712,0.595745707205312,0.261199789138935,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0,1.67412652294763,0,0,0.588231488031014,2.04913645487534,0.971020706062307,0.881277725829041,0.506884656097573,0.367093504323363,2.34717403304412,0.218025156380447,0.439372365468944,0.58328969722285,0.55994568650145,0,2.68452169692378,3.62681071005672,6.72187598284928,0.514518872071894,0.286533439938757,0,0,1.5869729378161,0,0.677689064138264,0,0,0,0,0,0.768436610643109,0.622137673850866,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.383381884072945,0,0,0,0.307213066512487,0.131886287730194,0.274462930807229,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.745597783301202,0.075726193333184,0.0755715601067855,1.44932244350839,0.860423876981386,0,0,0,0,0.842666520790511,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,7.25026074212081,0.593768556259299,0.867426633830679,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0.502666365318702,0.247194967734374,0.86759614151947,0.884610551949874,0.323533699894818,0,0,0,0,0.41889341362691,0.255457055208591,0.838705871541442,0,0.254140454146129,0,0,0,0,0,0.41557608911912,0.162241263067758,0.712875546952214,0.870848794270651,0.758168275301024,0.210441855886474,0.780722657776222,0.229902104433473,0.720248519221397,0.30140963567143,0.680364991513279,1.40925092313335,0.562210347358373,1.03481348295606,1.94011193639558,0.945530400839096,2.11141348996739,1.97276159184817,2.50242524303038,1.74126083261083,0.823128545631774,1.39323986772945,0,0,0,1.03562886267751,0.938104239924385,1.2604344302271,1.65721314909647,0.393528463494808,1.07986979021165,1.16266972375204,0.804820204198858,0.934122738937356,0.493679549740441,0.656669856316381,0.891756905004413,0.730999937126662,1.3173006917463,0.402619256281115,0,0.617427674275707,0.330418782983798,0.528901133327089,0.426576501070468,1.16118335930219,1.15980715189884,0.201683524623343,1.33426826306922,0.760902504450237,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0,0.948339504765408,0.913988100877831,6.76246414038483,0.814605311381257,0.193952487167626,0.771494018793504,0.822074982615345,0.738050739898011,0.156998727841375,0.246794327843601,0.296452627087149,1.16791574001266,0.196558995113203,0.674586337154561,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0.252578877947112,0.179397413521912,0,2.03228509183265,0.947457058852424,1.30371981153621,1.01847051465113,1.64283173801951,1.00503754465089,1.19021820443007,2.34160377429359,3.15270288212382,2.87904096543407,1.11618338060241,1.47476983244164,1.38147985492716,1.73578870297814,0,0,0,0.827810238914197,0.321101179975584,0,0.163934945376675,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.955875191810208,0.891194696329576,0.283076530788832,0.404810701674894,0.584511715822624,0,0.321321316421807,1.27746076687442,1.06839362200353,0.488660878060728,0.989820737835213,0,0.728341908464944,0.604647113929502,0.188605079755898,1.18120757152309,1.53717573971964,0.258428293168221,0,0,0,0,0,0.340439605753788,1.26042765821917,0.905510786479282,1.50035924522115,2.30542303734956,1.24858172321449,0.987294123612726,0.608929898229199,0.704015124191131,0.21183207086382,0.220528398054962,0.65954501176592,0.807322133479528,0.904693873922338,0.119372344003136,0.492422699235184,0.582961673259701,0,1.70870880797853,1.44470807574256,1.11116716421827,0.376736914009382,1.6403307326523,0.686334519619568,0.849892149969277,1.11961161858926,0.552799895217695,0,1.26534397432454,0.609958401380546,0.86404272657441,0.209088296014469,0.87345025498471,1.07891477107857,0.495920734352016,0.785267825952089,0.388844919875379,0.621339313086926,0,0.448549638131936,0.496375471371293,0.388902376688095,0.774958940866387,0.844780627453891,0.821500670520278,0.2604087696879,0.104859344425711,0.241584120826006,0,7.58426689507628,1.01362607645082,1.43795340030758,1.42912905275575,4.29664069601955,6.15912199821921,3.24527713703916,4.43068581523732,5.14928894735553,5.71551049912499,6.15039729334727,8.38137774361871,6.15755786498109,5.72696820689688,0.226730383615211,0.665957860122194,0,0.503653849092235,0.579568782096571,0.563047426353546,0.36630324853453,0.643105137237198,0,0,0,0.572895513439397,0.515559547031063,0,0,0,0,0,0.51776031175182,1.86817225651518,3.59122386060928,0.512200817262403,0.972426868273176,0.628839487883947,0.919217542250071,0.44449345560323,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,0.754505365544305,0.280924522409647,1.28050304809739,0.746661096422973,1.42888107384922,0.695305955669133,0.77163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|short_description=p5@Prkd2
}}
}}

Latest revision as of 07:14, 26 September 2015

Short description:p5@Prkd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Prkd2_5end
Coexpression cluster:MCL_coexpression_mm9:1721
Association with transcript: -24bp_to_ENSMUST00000086104, NM_178900, uc009fih.1_5end
EntrezGene:Prkd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Prkd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C74.43
thymus, neonate N06.CNhs11197.681-26C45.15
thymus, neonate N07.CNhs11211.713-19D35.72
thymus, neonate N10.CNhs11194.748-24E46.15
thymus, neonate N20.CNhs11186.820-7A28.38
thymus, neonate N25.CNhs11125.1362-25G76.16
thymus, neonate N30.CNhs11132.1393-42G25.73
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory tract1.71e-1541
respiratory system6.79e-1542
hemopoietic organ1.51e-1129
immune organ1.51e-1129
thymus2.47e-1023
neck2.47e-1023
respiratory system epithelium2.47e-1023
hemolymphoid system gland2.47e-1023
pharyngeal epithelium2.47e-1023
thymic region2.47e-1023
pharyngeal gland2.47e-1023
entire pharyngeal arch endoderm2.47e-1023
thymus primordium2.47e-1023
early pharyngeal endoderm2.47e-1023
pharynx1.11e-0924
gland of gut1.11e-0924
upper respiratory tract1.11e-0924
chordate pharynx1.11e-0924
pharyngeal arch system1.11e-0924
pharyngeal region of foregut1.11e-0924
mixed endoderm/mesoderm-derived structure1.77e-0935
foregut2.00e-0980
lung5.55e-0914
respiratory tube5.55e-0914
respiration organ5.55e-0914
pair of lungs5.55e-0914
lung primordium5.55e-0914
lung bud5.55e-0914
anterior region of body1.79e-0843
endo-epithelium4.28e-0869
segment of respiratory tract5.01e-0827
primordium5.40e-08134
hemolymphoid system6.76e-0848
immune system6.76e-0848
hematopoietic system8.06e-0845
blood island8.06e-0845
epithelial bud8.40e-0717
thoracic cavity element8.40e-0717
thoracic segment organ8.40e-0717
thoracic cavity8.40e-0717
thoracic segment of trunk8.40e-0717
respiratory primordium8.40e-0717
endoderm of foregut8.40e-0717
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