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FFCP PHASE1:Mm9::chr7:53039253..53039314,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:53039253..53039314,+
|DHSsupport=NA
|short_description=p2@Lmtk3
|DPIdataset=NA
|description=CAGE_peak_2_at_Lmtk3_5end
|association_with_transcript=-2bp_to_ENSMUST00000072580,NM_001005511,uc009gxd.1,uc012fkq.1_5end
|EntrezGene=381983
|EntrezGene=381983
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q5XJV6
|UniProt=Q5XJV6
|association_with_transcript=-2bp_to_ENSMUST00000072580,NM_001005511,uc009gxd.1,uc012fkq.1_5end
|cluster_id=chr7:53039253..53039314,+
|description=CAGE_peak_2_at_Lmtk3_5end
|id=chr7:53039253..53039314,+
|ontology_enrichment_celltype=CL:0000540!9.22e-15!33;CL:0000047!9.22e-15!33;CL:0000031!9.22e-15!33;CL:0000404!9.22e-15!33;CL:0000117!5.97e-14!23;CL:0000337!5.97e-14!23;CL:0000221!5.70e-13!44;CL:0000133!5.70e-13!44;CL:0002319!6.13e-13!43;CL:0000393!8.19e-10!39;CL:0000211!8.19e-10!39;CL:0000055!1.63e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-18,23;CL:0000337,1.52e-18,23;CL:0000540,5.96e-17,33;CL:0000047,5.96e-17,33;CL:0000031,5.96e-17,33;CL:0000404,5.96e-17,33;CL:0002319,1.07e-13,43;CL:0000221,4.00e-13,44;CL:0000133,4.00e-13,44;CL:0000393,1.13e-12,39;CL:0000211,1.13e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.88e-33!73;UBERON:0005743!6.88e-33!73;UBERON:0000073!2.43e-31!75;UBERON:0001016!2.43e-31!75;UBERON:0004121!6.04e-28!102;UBERON:0000924!6.04e-28!102;UBERON:0006601!6.04e-28!102;UBERON:0002346!1.03e-26!71;UBERON:0003075!1.03e-26!71;UBERON:0007284!1.03e-26!71;UBERON:0001049!3.96e-26!52;UBERON:0005068!3.96e-26!52;UBERON:0006241!3.96e-26!52;UBERON:0007135!3.96e-26!52;UBERON:0000955!5.30e-25!50;UBERON:0006238!5.30e-25!50;UBERON:0000033!7.00e-25!63;UBERON:0002616!2.56e-24!49;UBERON:0003056!4.50e-23!49;UBERON:0003080!1.50e-21!40;UBERON:0002020!5.62e-21!34;UBERON:0002780!6.69e-21!39;UBERON:0001890!6.69e-21!39;UBERON:0006240!6.69e-21!39;UBERON:0002791!3.42e-18!29;UBERON:0003528!3.42e-18!29;UBERON:0001893!3.42e-18!29;UBERON:0000956!2.74e-13!21;UBERON:0001869!2.74e-13!21;UBERON:0000203!2.74e-13!21;UBERON:0000153!3.68e-13!94;UBERON:0007811!7.53e-13!86;UBERON:0002619!6.80e-11!17;UBERON:0002021!3.68e-08!10;UBERON:0000411!3.68e-08!10;UBERON:0001950!3.68e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-39,73;UBERON:0001016,7.22e-38,75;UBERON:0000073,1.27e-35,54;UBERON:0002346,1.33e-35,64;UBERON:0003075,1.33e-35,64;UBERON:0007284,1.33e-35,64;UBERON:0001049,5.82e-34,52;UBERON:0005068,5.82e-34,52;UBERON:0006241,5.82e-34,52;UBERON:0007135,5.82e-34,52;UBERON:0004121,8.10e-32,95;UBERON:0000924,8.10e-32,95;UBERON:0006601,8.10e-32,95;UBERON:0000955,4.37e-30,47;UBERON:0006238,4.37e-30,47;UBERON:0002616,3.60e-29,46;UBERON:0003056,1.24e-28,49;UBERON:0010371,1.86e-28,73;UBERON:0003080,2.81e-28,40;UBERON:0002020,1.90e-27,34;UBERON:0002780,2.17e-27,39;UBERON:0001890,2.17e-27,39;UBERON:0006240,2.17e-27,39;UBERON:0003528,1.26e-23,29;UBERON:0002791,1.26e-23,29;UBERON:0001893,1.26e-23,29;UBERON:0010314,7.24e-19,92;UBERON:0000956,6.53e-17,21;UBERON:0001869,6.53e-17,21;UBERON:0000203,6.53e-17,21;UBERON:0002619,1.22e-13,17;UBERON:0002021,1.31e-10,10;UBERON:0000411,1.31e-10,10;UBERON:0001950,1.31e-10,10;UBERON:0002420,8.05e-08,8;UBERON:0007245,8.05e-08,8;UBERON:0010009,8.05e-08,8;UBERON:0010011,8.05e-08,8;UBERON:0000454,8.05e-08,8
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,8.24919914465377,0.595745707205312,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.31811709640683,0.388859798148567,0.419959264876088,2.87505128729943,0,0,0.336093799142464,0,0,0,31.9660008158165,34.9134046319542,41.1990412279016,0,0,0,0.988866362566974,0,1.49800055259202,1.53687322128622,23.5375419940244,28.2162411113233,23.135745748652,17.9960120174396,18.1112203580323,24.8656322406357,24.4405951096503,34.9303138911808,23.1243350098716,16.98241596533,11.6740965274745,41.1485217718205,43.548118354747,32.8175423450759,6.97957497503452,14.6318278608237,14.3630352910202,22.6864010814724,22.7794689278565,30.383109669524,0.075726193333184,0,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0.704217098883403,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.445326417194474,0.693941307064543,0,0,0.60289056221049,1.17588707135705,0.879666139307728,0,0.144599356919912,0,0,0,0,0,24.59358694897,20.1068838540917,0,0,0,0,32.5045687508465,48.952564501593,56.7957671550147,49.7137555749911,53.4445305820391,24.103413168909,33.2594589288903,0.305518091550949,0.373220911830279,0.505445516867349,0.631325567659422,1.04096354370163,0.689706313300419,2.16074555766419,3.46621081022145,4.150226448231,4.86832137082429,4.2165776051878,6.20888089773638,0.431135985865684,1.70195472151037,0.879755620819744,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0,65.8207539005718,47.2332170820916,0,0,0.639864751605702,0.696710015581316,0.515469845288373,0.201683524623343,0.667134131534611,0,0,0,0.754005626400808,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.571242563048644,0,1.01825663922657,0.193952487167626,0.140271639780637,0.316182685621286,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.568474235311454,0.814824882210129,0.678980343100753,0.234690248288502,0.670025029767263,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,8.66973185934077,11.3695335994437,0,0,3.47059041357882,1.56175497718655,1.29254038639679,1.43381278771531,0.891194696329576,0.566153061577665,2.02405350837447,2.33804686329049,2.76701444562566,33.0960955914461,0,0.178065603667255,0.162886959353576,0.659880491890142,0,1.45668381692989,0.604647113929502,0.754420319023592,0,0.922305443831782,0.775284879504663,1.09060118843252,0.712994756769443,0.316036757935816,0,1.03135543248187,11.5749465956288,1.98067203434441,2.06973894052407,2.14337035031592,2.48276327099183,2.14042581122485,1.81003922662333,1.522324745573,0,0.21183207086382,0.220528398054962,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.328281799490123,0,10.0129663085675,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.813277868507395,0.432021363287205,0.836353184057875,0.218362563746178,0.539457385539283,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,1.35164900392623,0.234714477291508,0.39061315453185,0,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0.443971906748129,0,0,0.19318959403219,0.187682475451182,0,0,0,41.2268845110459,41.8895965221531,43.5400590213941,50.3529824267005,35.6242910280734,40.0358765616541,45.9015300157628,42.7805143063009,38.9702471726416,46.5984280576638,0.415149390336707,2.79317411380722,6.4878770186571,9.96737539980005,4.40187641518763,3.30918315210025,6.22290837844523,7.41726206060019,7.38114182061175,6.31743029409494,7.35089969681695,6.97917463128482,7.30403758265083,6.53056554529667,6.94969174362921,5.71552429539688,6.2577536010222,5.59436739344745,7.82963211526283,5.4463600449727,6.17164654293748,5.6792257970988,6.91464950847231,5.52316383202848,5.8347815857505,7.10762706290083,3.29270351170991,4.99832451731901,6.24698923690964,5.61142271657738,6.76219603307793,5.22073756590486,4.50154147486658,5.57772628269478,6.75173138433995,22.982573170291,5.38042699424439,4.94203424311086,1.72159498861959,0.220591419119515,0
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,8.24919914465377,0.595745707205312,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.31811709640683,0.388859798148567,0.419959264876088,2.87505128729943,0,0,0.336093799142464,0,0,0,31.9660008158165,34.9134046319542,41.1990412279016,0,0,0,0.988866362566974,0,1.49800055259202,1.53687322128622,23.5375419940244,28.2162411113233,23.135745748652,17.9960120174396,18.1112203580323,24.8656322406357,24.4405951096503,34.9303138911808,23.1243350098716,16.98241596533,11.6740965274745,41.1485217718205,43.548118354747,32.8175423450759,6.97957497503452,14.6318278608237,14.3630352910202,22.6864010814724,22.7794689278565,30.383109669524,0.075726193333184,0,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0.704217098883403,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.445326417194474,0.693941307064543,0,0,0.60289056221049,1.17588707135705,0.879666139307728,0,0.144599356919912,0,0,0,0,0,24.59358694897,20.1068838540917,0,0,0,0,32.5045687508465,48.952564501593,56.7957671550147,49.7137555749911,53.4445305820391,24.103413168909,33.2594589288903,0.305518091550949,0.373220911830279,0.505445516867349,0.631325567659422,1.04096354370163,0.689706313300419,2.16074555766419,3.46621081022145,4.150226448231,4.86832137082429,4.2165776051878,6.20888089773638,0.431135985865684,1.70195472151037,0.879755620819744,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0,65.8207539005718,47.2332170820916,0,0,0.639864751605702,0.696710015581316,0.515469845288373,0.201683524623343,0.667134131534611,0,0,0,0.754005626400808,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.571242563048644,0,1.01825663922657,0.193952487167626,0.140271639780637,0.316182685621286,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.568474235311454,0.814824882210129,0.678980343100753,0.234690248288502,0.670025029767263,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,8.66973185934077,11.3695335994437,0,0,3.47059041357882,1.56175497718655,1.29254038639679,1.43381278771531,0.891194696329576,0.566153061577665,2.02405350837447,2.33804686329049,2.76701444562566,33.0960955914461,0,0.178065603667255,0.162886959353576,0.659880491890142,0,1.45668381692989,0.604647113929502,0.754420319023592,0,0.922305443831782,0.775284879504663,1.09060118843252,0.712994756769443,0.316036757935816,0,1.03135543248187,11.5749465956288,1.98067203434441,2.06973894052407,2.14337035031592,2.48276327099183,2.14042581122485,1.81003922662333,1.522324745573,0,0.21183207086382,0.220528398054962,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.328281799490123,0,10.0129663085675,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.813277868507395,0.432021363287205,0.836353184057875,0.218362563746178,0.539457385539283,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,1.35164900392623,0.234714477291508,0.39061315453185,0,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0.443971906748129,0,0,0.19318959403219,0.187682475451182,0,0,0,41.2268845110459,41.8895965221531,43.5400590213941,50.3529824267005,35.6242910280734,40.0358765616541,45.9015300157628,42.7805143063009,38.9702471726416,46.5984280576638,0.415149390336707,2.79317411380722,6.4878770186571,9.96737539980005,4.40187641518763,3.30918315210025,6.22290837844523,7.41726206060019,7.38114182061175,6.31743029409494,7.35089969681695,6.97917463128482,7.30403758265083,6.53056554529667,6.94969174362921,5.71552429539688,6.2577536010222,5.59436739344745,7.82963211526283,5.4463600449727,6.17164654293748,5.6792257970988,6.91464950847231,5.52316383202848,5.8347815857505,7.10762706290083,3.29270351170991,4.99832451731901,6.24698923690964,5.61142271657738,6.76219603307793,5.22073756590486,4.50154147486658,5.57772628269478,6.75173138433995,22.982573170291,5.38042699424439,4.94203424311086,1.72159498861959,0.220591419119515,0
|short_description=p2@Lmtk3
}}
}}

Latest revision as of 21:53, 26 September 2015

Short description:p2@Lmtk3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lmtk3_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -2bp_to_ENSMUST00000072580, NM_001005511, uc009gxd.1, uc012fkq.1_5end
EntrezGene:Lmtk3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lmtk3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C331.97
Mouse Granule cells, donor2.CNhs12357.11731-123E334.91
Mouse Granule cells, donor3.CNhs12108.11636-122C741.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.54
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F528.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.87
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.15
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F443.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.82
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.38
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.59
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A432.50
corpus striatum, adult.CNhs10487.19-21D848.95
corpus striatum, neonate N00.CNhs11226.630-43F156.80
cortex, adult.CNhs10473.12-14D549.71
cortex, neonate N30.CNhs11107.1392-42F253.44
diencephalon, adult.CNhs10482.20-12F224.10
diencephalon, neonate N30.CNhs11201.1388-42B233.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E865.82
hippocampus, neonate N00.CNhs11228.627-43G147.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C28.67
medulla oblongata, neonate N30.CNhs11200.1396-42A311.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I933.10
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A343.54
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D750.35
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A435.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A645.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A742.78
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.60
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I522.98
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.52e-1823
neuroblast (sensu Vertebrata)1.52e-1823
neuron5.96e-1733
neuronal stem cell5.96e-1733
neuroblast5.96e-1733
electrically signaling cell5.96e-1733
neural cell1.07e-1343
ectodermal cell4.00e-1344
neurectodermal cell4.00e-1344
electrically responsive cell1.13e-1239
electrically active cell1.13e-1239

Uber anatomy
Ontology termp-valuen
central nervous system1.36e-3973
nervous system7.22e-3875
regional part of nervous system1.27e-3554
neurectoderm1.33e-3564
neural plate1.33e-3564
presumptive neural plate1.33e-3564
neural tube5.82e-3452
neural rod5.82e-3452
future spinal cord5.82e-3452
neural keel5.82e-3452
ectoderm-derived structure8.10e-3295
ectoderm8.10e-3295
presumptive ectoderm8.10e-3295
brain4.37e-3047
future brain4.37e-3047
regional part of brain3.60e-2946
pre-chordal neural plate1.24e-2849
ecto-epithelium1.86e-2873
anterior neural tube2.81e-2840
gray matter1.90e-2734
regional part of forebrain2.17e-2739
forebrain2.17e-2739
future forebrain2.17e-2739
brain grey matter1.26e-2329
regional part of telencephalon1.26e-2329
telencephalon1.26e-2329
structure with developmental contribution from neural crest7.24e-1992
cerebral cortex6.53e-1721
cerebral hemisphere6.53e-1721
pallium6.53e-1721
regional part of cerebral cortex1.22e-1317
occipital lobe1.31e-1010
visual cortex1.31e-1010
neocortex1.31e-1010
basal ganglion8.05e-088
nuclear complex of neuraxis8.05e-088
aggregate regional part of brain8.05e-088
collection of basal ganglia8.05e-088
cerebral subcortex8.05e-088
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