FFCP PHASE1:Mm9::chr7:57215165..57215169,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr7:57215165..57215169,+ to FFCP PHASE1:Mm9::chr7:57215165..57215169,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=353 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:57215165..57215169,+ | |||
|description=CAGE_peak_at_chr7:57215165..57215169,+ | |||
|id=chr7:57215165..57215169,+ | |||
|ontology_enrichment_celltype=CL:0002612!9.65e-13!3;CL:0002611!7.47e-09!2;CL:0000117!1.54e-07!23;CL:0000337!1.54e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.11e-20,3;CL:0002611,2.13e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!9.85e-26!12;UBERON:0003057!9.85e-26!12;UBERON:0002240!8.44e-24!6;UBERON:0005174!8.44e-24!6;UBERON:0001137!8.44e-24!6;UBERON:0001948!6.13e-20!5;UBERON:0002315!6.13e-20!5;UBERON:0002257!9.65e-13!3;UBERON:0002346!5.06e-11!71;UBERON:0003075!5.06e-11!71;UBERON:0007284!5.06e-11!71;UBERON:0002298!7.72e-11!6;UBERON:0001896!3.35e-09!2;UBERON:0005290!3.35e-09!2;UBERON:0010096!3.35e-09!2;UBERON:0002256!7.47e-09!2;UBERON:0002369!1.41e-08!7;UBERON:0006858!1.41e-08!7;UBERON:0004121!8.57e-08!102;UBERON:0000924!8.57e-08!102;UBERON:0006601!8.57e-08!102;UBERON:0001049!2.56e-07!52;UBERON:0005068!2.56e-07!52;UBERON:0006241!2.56e-07!52;UBERON:0007135!2.56e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.08e-43,12;UBERON:0003057,1.08e-43,12;UBERON:0002240,5.90e-39,6;UBERON:0005174,5.90e-39,6;UBERON:0001137,5.90e-39,6;UBERON:0001896,4.77e-30,2;UBERON:0002298,4.77e-30,2;UBERON:0005290,4.77e-30,2;UBERON:0010096,4.77e-30,2;UBERON:0001948,1.71e-26,5;UBERON:0002315,1.71e-26,5;UBERON:0002257,3.11e-20,3;UBERON:0000489,1.28e-11,21;UBERON:0004733,9.54e-11,6;UBERON:0004732,9.54e-11,6;UBERON:0002028,9.54e-11,6;UBERON:0007277,9.54e-11,6;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002256,2.13e-08,2;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000073,4.03e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.662605622854841,0,0,0,0,0,0.153606533256243,0,0,0,0.837548997004143,0,0,1.76777151284201,3.27454865837937,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.461230994512117,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86073617438886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.662605622854841,0,0,0,0,0,0.153606533256243,0,0,0,0.837548997004143,0,0,1.76777151284201,3.27454865837937,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.461230994512117,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86073617438886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:57215165..57215169,+ | |||
}} | }} |
Latest revision as of 10:40, 5 August 2015
Short description: | p@chr7:57215165..57215169, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:57215165..57215169, + |
Coexpression cluster: | MCL_coexpression_mm9:353 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.11e-20 | 3 |
neuron of the dorsal spinal cord | 2.13e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 1.08e-43 | 12 |
chordal neural plate | 1.08e-43 | 12 |
spinal cord | 5.90e-39 | 6 |
dorsal region element | 5.90e-39 | 6 |
dorsum | 5.90e-39 | 6 |
medulla oblongata | 4.77e-30 | 2 |
brainstem | 4.77e-30 | 2 |
myelencephalon | 4.77e-30 | 2 |
future myelencephalon | 4.77e-30 | 2 |
regional part of spinal cord | 1.71e-26 | 5 |
gray matter of spinal cord | 1.71e-26 | 5 |
ventral horn of spinal cord | 3.11e-20 | 3 |
cavitated compound organ | 1.28e-11 | 21 |
segmental subdivision of hindbrain | 9.54e-11 | 6 |
segmental subdivision of nervous system | 9.54e-11 | 6 |
hindbrain | 9.54e-11 | 6 |
presumptive hindbrain | 9.54e-11 | 6 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
dorsal horn of spinal cord | 2.13e-08 | 2 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 4.03e-07 | 54 |