FF:11474-119C7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004933 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004933 | ||
|accession_numbers=CAGE;DRX008098;DRR008970;DRZ000395;DRZ001780;DRZ011745;DRZ013130 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037234;DRR041600;DRZ007242 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003688,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0004457,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0000042,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002417,UBERON:0002358,UBERON:0000916,UBERON:0003684,UBERON:0001178 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000325,CL:0000255,CL:0000136,CL:0002615 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000039 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor2.CNhs12067.11474-119C7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor2.CNhs12067.11474-119C7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor2.CNhs12067.11474-119C7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor2.CNhs12067.11474-119C7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor2.CNhs12067.11474-119C7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11474-119C7 | |id=FF:11474-119C7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000039 | ||
|is_obsolete= | |||
|library_id=CNhs12067 | |||
|library_id_phase_based=2:CNhs12067 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11474 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10014.GGCTAC.11474 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11474 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10014.GGCTAC.11474 | |||
|name=Adipocyte - omental, donor2 | |name=Adipocyte - omental, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12067,LSID838,release011,COMPLETED | |profile_hcage=CNhs12067,LSID838,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10014,,, | |profile_srnaseq=SRhi10014,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=119 | |rna_box=119 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 56: | Line 82: | ||
|rna_tube_id=119C7 | |rna_tube_id=119C7 | ||
|rna_weight_ug=13.7 | |rna_weight_ug=13.7 | ||
|rnaseq_library_id=SRhi10014.GGCTAC | |||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.33889772839899e-247!GO:0005737;cytoplasm;3.46174301925828e-187!GO:0044444;cytoplasmic part;4.09592901155504e-156!GO:0043231;intracellular membrane-bound organelle;8.00635402342376e-126!GO:0043227;membrane-bound organelle;1.46095949310828e-125!GO:0043226;organelle;6.1292920208361e-125!GO:0043229;intracellular organelle;1.12173924056297e-124!GO:0044422;organelle part;3.46301671908891e-105!GO:0044446;intracellular organelle part;5.46356045287214e-104!GO:0032991;macromolecular complex;5.60416427075778e-71!GO:0005515;protein binding;9.1726177892445e-71!GO:0005739;mitochondrion;1.0167279095877e-70!GO:0030529;ribonucleoprotein complex;2.36370948495472e-64!GO:0031090;organelle membrane;5.38539720618876e-57!GO:0044237;cellular metabolic process;9.47949833513403e-56!GO:0044238;primary metabolic process;1.54235121958451e-53!GO:0043233;organelle lumen;2.99323636288842e-52!GO:0031974;membrane-enclosed lumen;2.99323636288842e-52!GO:0044429;mitochondrial part;8.50167638349994e-49!GO:0009058;biosynthetic process;4.54005624344789e-44!GO:0005840;ribosome;2.00431021471805e-43!GO:0043170;macromolecule metabolic process;1.3503220295926e-42!GO:0019538;protein metabolic process;1.26445960508511e-41!GO:0003723;RNA binding;3.77870004664316e-41!GO:0005829;cytosol;1.14074445579927e-40!GO:0006412;translation;1.18289521778817e-39!GO:0044249;cellular biosynthetic process;2.41782827812377e-39!GO:0031967;organelle envelope;3.90296169459071e-39!GO:0003735;structural constituent of ribosome;4.15848179264614e-39!GO:0044428;nuclear part;8.43814404597172e-39!GO:0031975;envelope;8.43814404597172e-39!GO:0015031;protein transport;4.55809024795529e-38!GO:0044260;cellular macromolecule metabolic process;1.49305487203944e-37!GO:0033036;macromolecule localization;1.94391912651988e-36!GO:0009059;macromolecule biosynthetic process;3.72136840249332e-36!GO:0044267;cellular protein metabolic process;5.75688342355741e-36!GO:0045184;establishment of protein localization;1.4206494215779e-35!GO:0043234;protein complex;1.55538808698255e-35!GO:0033279;ribosomal subunit;1.6820616853478e-35!GO:0016043;cellular component organization and biogenesis;3.58468723432834e-35!GO:0008104;protein localization;8.15750731209387e-35!GO:0005740;mitochondrial envelope;1.65694681691905e-33!GO:0031966;mitochondrial membrane;5.93277258201325e-32!GO:0019866;organelle inner membrane;1.2353457818522e-29!GO:0005743;mitochondrial inner membrane;4.8940288365335e-29!GO:0005783;endoplasmic reticulum;2.49784499234016e-28!GO:0006396;RNA processing;6.8205397152807e-28!GO:0046907;intracellular transport;6.83711466997671e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.52546975579515e-25!GO:0006886;intracellular protein transport;2.30118565403441e-24!GO:0031981;nuclear lumen;4.39627736944692e-24!GO:0006119;oxidative phosphorylation;1.48201973025685e-23!GO:0016071;mRNA metabolic process;6.75938961501464e-23!GO:0005634;nucleus;2.15286219472626e-22!GO:0008380;RNA splicing;2.15934403758718e-22!GO:0012505;endomembrane system;8.07329160241995e-22!GO:0044432;endoplasmic reticulum part;1.22831405530142e-21!GO:0044455;mitochondrial membrane part;1.65903826465923e-21!GO:0065003;macromolecular complex assembly;2.12575392293343e-21!GO:0006397;mRNA processing;5.37256650418812e-20!GO:0022607;cellular component assembly;1.65972460944327e-19!GO:0044445;cytosolic part;2.7958399090127e-19!GO:0015934;large ribosomal subunit;2.85350984574517e-19!GO:0031980;mitochondrial lumen;5.21145145876011e-19!GO:0005759;mitochondrial matrix;5.21145145876011e-19!GO:0051186;cofactor metabolic process;5.49627170962097e-19!GO:0006457;protein folding;5.49627170962097e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.68989920985665e-19!GO:0048770;pigment granule;1.20528740746696e-18!GO:0042470;melanosome;1.20528740746696e-18!GO:0005746;mitochondrial respiratory chain;4.57510509789441e-18!GO:0005794;Golgi apparatus;5.04527655258893e-18!GO:0015935;small ribosomal subunit;4.27290124459296e-17!GO:0051649;establishment of cellular localization;1.62999640374917e-16!GO:0051641;cellular localization;2.64478415086392e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.3235828431224e-16!GO:0005681;spliceosome;9.51041363444538e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.53859437571378e-15!GO:0003954;NADH dehydrogenase activity;1.53859437571378e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.53859437571378e-15!GO:0048193;Golgi vesicle transport;3.7217935194722e-15!GO:0006732;coenzyme metabolic process;3.80348836858063e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.62419004889907e-15!GO:0005654;nucleoplasm;1.1054856827737e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.27749431177297e-14!GO:0009055;electron carrier activity;1.27749431177297e-14!GO:0005789;endoplasmic reticulum membrane;1.33344968251565e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.85476038321661e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.85529203113604e-14!GO:0016462;pyrophosphatase activity;1.95736926817256e-14!GO:0016491;oxidoreductase activity;1.98515404237811e-14!GO:0006996;organelle organization and biogenesis;2.21652696130881e-14!GO:0010467;gene expression;3.06957784668155e-14!GO:0000502;proteasome complex (sensu Eukaryota);4.0271824662048e-14!GO:0042775;organelle ATP synthesis coupled electron transport;6.66732448045618e-14!GO:0042773;ATP synthesis coupled electron transport;6.66732448045618e-14!GO:0051082;unfolded protein binding;7.06286688677039e-14!GO:0030964;NADH dehydrogenase complex (quinone);7.26811629496472e-14!GO:0045271;respiratory chain complex I;7.26811629496472e-14!GO:0005747;mitochondrial respiratory chain complex I;7.26811629496472e-14!GO:0017111;nucleoside-triphosphatase activity;8.80193925006328e-14!GO:0005761;mitochondrial ribosome;1.01173127903684e-13!GO:0000313;organellar ribosome;1.01173127903684e-13!GO:0043283;biopolymer metabolic process;1.51836052475085e-13!GO:0044248;cellular catabolic process;1.63840224805377e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.63840224805377e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.45117215066413e-13!GO:0022618;protein-RNA complex assembly;2.83190876208398e-13!GO:0043228;non-membrane-bound organelle;5.77721823003218e-13!GO:0043232;intracellular non-membrane-bound organelle;5.77721823003218e-13!GO:0044451;nucleoplasm part;1.09933533574232e-12!GO:0006605;protein targeting;1.63701312300192e-12!GO:0016192;vesicle-mediated transport;1.93015512682414e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;3.38829085384157e-12!GO:0044265;cellular macromolecule catabolic process;4.66770673448464e-12!GO:0006091;generation of precursor metabolites and energy;4.74743334750388e-12!GO:0012501;programmed cell death;5.41008211142285e-12!GO:0044257;cellular protein catabolic process;6.69570557751491e-12!GO:0019941;modification-dependent protein catabolic process;6.98517485825063e-12!GO:0043632;modification-dependent macromolecule catabolic process;6.98517485825063e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.17685691317012e-12!GO:0016874;ligase activity;9.55097079113939e-12!GO:0043285;biopolymer catabolic process;1.07313897114416e-11!GO:0006511;ubiquitin-dependent protein catabolic process;1.19914158530422e-11!GO:0006512;ubiquitin cycle;1.34268779661216e-11!GO:0008219;cell death;1.56445652910753e-11!GO:0016265;death;1.56445652910753e-11!GO:0006915;apoptosis;1.58930227153161e-11!GO:0008134;transcription factor binding;1.76965057883818e-11!GO:0008135;translation factor activity, nucleic acid binding;2.63803894781009e-11!GO:0009057;macromolecule catabolic process;3.58129944999483e-11!GO:0005793;ER-Golgi intermediate compartment;3.68335487219507e-11!GO:0000166;nucleotide binding;5.40642325055128e-11!GO:0030163;protein catabolic process;1.24633540376633e-10!GO:0005730;nucleolus;2.95898695760574e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.01544487080228e-10!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.17347615343641e-09!GO:0005788;endoplasmic reticulum lumen;1.22804288810248e-09!GO:0009259;ribonucleotide metabolic process;2.16295788315731e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.2505456778838e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.10153279796568e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.36647807700175e-09!GO:0000375;RNA splicing, via transesterification reactions;3.36647807700175e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.36647807700175e-09!GO:0009150;purine ribonucleotide metabolic process;4.07149162310821e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.62373860996204e-09!GO:0009144;purine nucleoside triphosphate metabolic process;4.62373860996204e-09!GO:0006163;purine nucleotide metabolic process;4.77043447368697e-09!GO:0009141;nucleoside triphosphate metabolic process;5.86543701835395e-09!GO:0048523;negative regulation of cellular process;6.07342410040401e-09!GO:0009060;aerobic respiration;6.44809959701896e-09!GO:0015986;ATP synthesis coupled proton transport;7.09807243118023e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.09807243118023e-09!GO:0045333;cellular respiration;7.23668992195048e-09!GO:0009142;nucleoside triphosphate biosynthetic process;8.59198019011356e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.59198019011356e-09!GO:0005768;endosome;9.28673882716912e-09!GO:0008565;protein transporter activity;1.11818463200068e-08!GO:0003743;translation initiation factor activity;1.14655554181497e-08!GO:0006413;translational initiation;1.23363775549241e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.29947755633068e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.29947755633068e-08!GO:0006446;regulation of translational initiation;1.30939336366397e-08!GO:0051188;cofactor biosynthetic process;1.36360421879705e-08!GO:0009056;catabolic process;1.36360421879705e-08!GO:0016049;cell growth;1.44695969065902e-08!GO:0008361;regulation of cell size;1.69985574772021e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.74499351587929e-08!GO:0044431;Golgi apparatus part;1.74499351587929e-08!GO:0006164;purine nucleotide biosynthetic process;2.14534651304992e-08!GO:0009260;ribonucleotide biosynthetic process;2.4823586085243e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.49845436413163e-08!GO:0046034;ATP metabolic process;3.07483332350934e-08!GO:0006461;protein complex assembly;3.31276958883598e-08!GO:0044262;cellular carbohydrate metabolic process;3.72700017437284e-08!GO:0051187;cofactor catabolic process;4.07003994648791e-08!GO:0016023;cytoplasmic membrane-bound vesicle;4.15463251111485e-08!GO:0017076;purine nucleotide binding;4.8776403668755e-08!GO:0015980;energy derivation by oxidation of organic compounds;4.99778064177735e-08!GO:0031988;membrane-bound vesicle;5.24531878467614e-08!GO:0015078;hydrogen ion transmembrane transporter activity;5.62697366560446e-08!GO:0019829;cation-transporting ATPase activity;5.8188430937847e-08!GO:0005773;vacuole;6.10591177802264e-08!GO:0043412;biopolymer modification;6.62935955391989e-08!GO:0006754;ATP biosynthetic process;6.84983983777624e-08!GO:0006753;nucleoside phosphate metabolic process;6.84983983777624e-08!GO:0048519;negative regulation of biological process;7.09525387551805e-08!GO:0009109;coenzyme catabolic process;7.74329029311682e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.83574253866457e-08!GO:0008654;phospholipid biosynthetic process;8.18306087418581e-08!GO:0030120;vesicle coat;1.31194179573832e-07!GO:0030662;coated vesicle membrane;1.31194179573832e-07!GO:0032553;ribonucleotide binding;1.44257015818615e-07!GO:0032555;purine ribonucleotide binding;1.44257015818615e-07!GO:0005635;nuclear envelope;1.94260881099504e-07!GO:0006099;tricarboxylic acid cycle;2.39549191226267e-07!GO:0046356;acetyl-CoA catabolic process;2.39549191226267e-07!GO:0006084;acetyl-CoA metabolic process;2.45194490084668e-07!GO:0001558;regulation of cell growth;2.55353251080151e-07!GO:0003712;transcription cofactor activity;2.75219639244648e-07!GO:0048475;coated membrane;2.91071407858731e-07!GO:0030117;membrane coat;2.91071407858731e-07!GO:0006464;protein modification process;3.19236337706989e-07!GO:0008639;small protein conjugating enzyme activity;3.93784070295603e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.19217859642004e-07!GO:0004842;ubiquitin-protein ligase activity;6.5504644929509e-07!GO:0043067;regulation of programmed cell death;7.0730179263675e-07!GO:0009117;nucleotide metabolic process;7.482563480444e-07!GO:0019787;small conjugating protein ligase activity;7.70436279647846e-07!GO:0000323;lytic vacuole;7.97106425107611e-07!GO:0005764;lysosome;7.97106425107611e-07!GO:0031982;vesicle;8.08651396435951e-07!GO:0006752;group transfer coenzyme metabolic process;8.29589209205996e-07!GO:0031410;cytoplasmic vesicle;8.66108415152792e-07!GO:0009108;coenzyme biosynthetic process;8.90940598475116e-07!GO:0016887;ATPase activity;9.37197129783032e-07!GO:0006082;organic acid metabolic process;9.4136964263316e-07!GO:0031965;nuclear membrane;9.74613648591361e-07!GO:0042981;regulation of apoptosis;1.00528385249138e-06!GO:0019752;carboxylic acid metabolic process;1.0294713364718e-06!GO:0007005;mitochondrion organization and biogenesis;1.12430111806308e-06!GO:0042623;ATPase activity, coupled;1.18450792350355e-06!GO:0005798;Golgi-associated vesicle;1.24829230315159e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.3142323654993e-06!GO:0006259;DNA metabolic process;1.59048532820747e-06!GO:0003924;GTPase activity;1.85886890994402e-06!GO:0006913;nucleocytoplasmic transport;1.91862629138944e-06!GO:0008610;lipid biosynthetic process;2.1820874729274e-06!GO:0017038;protein import;2.32728001789444e-06!GO:0016604;nuclear body;2.33425767904527e-06!GO:0042254;ribosome biogenesis and assembly;2.6166210217781e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.64004408654077e-06!GO:0045259;proton-transporting ATP synthase complex;2.74527696385375e-06!GO:0051169;nuclear transport;2.76512078435603e-06!GO:0030532;small nuclear ribonucleoprotein complex;3.43026191946549e-06!GO:0051246;regulation of protein metabolic process;4.67389610159862e-06!GO:0044440;endosomal part;5.07430934288819e-06!GO:0010008;endosome membrane;5.07430934288819e-06!GO:0043069;negative regulation of programmed cell death;5.11975183374158e-06!GO:0030133;transport vesicle;5.47173922646935e-06!GO:0006399;tRNA metabolic process;5.51531531247631e-06!GO:0000139;Golgi membrane;5.9166174160436e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.53208426717282e-06!GO:0016853;isomerase activity;8.73951523129633e-06!GO:0003714;transcription corepressor activity;9.73144042764094e-06!GO:0040008;regulation of growth;1.0017783907343e-05!GO:0016881;acid-amino acid ligase activity;1.00628080316465e-05!GO:0051789;response to protein stimulus;1.0250876053092e-05!GO:0006986;response to unfolded protein;1.0250876053092e-05!GO:0043066;negative regulation of apoptosis;1.10312736125972e-05!GO:0031252;leading edge;1.24666809544237e-05!GO:0005770;late endosome;1.28991272150486e-05!GO:0005762;mitochondrial large ribosomal subunit;1.41455307452847e-05!GO:0000315;organellar large ribosomal subunit;1.41455307452847e-05!GO:0043687;post-translational protein modification;1.5313774481561e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.70861454127121e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.70861454127121e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.70861454127121e-05!GO:0030554;adenyl nucleotide binding;1.85958393280773e-05!GO:0043038;amino acid activation;1.90177693501853e-05!GO:0006418;tRNA aminoacylation for protein translation;1.90177693501853e-05!GO:0043039;tRNA aminoacylation;1.90177693501853e-05!GO:0016607;nuclear speck;2.16427044094775e-05!GO:0016787;hydrolase activity;2.20265046821642e-05!GO:0045454;cell redox homeostasis;2.27103359776702e-05!GO:0044453;nuclear membrane part;2.30281688110874e-05!GO:0019867;outer membrane;2.30281688110874e-05!GO:0046474;glycerophospholipid biosynthetic process;2.34720126830475e-05!GO:0004298;threonine endopeptidase activity;2.81348740691193e-05!GO:0006916;anti-apoptosis;3.02635461363537e-05!GO:0006613;cotranslational protein targeting to membrane;3.12155918624609e-05!GO:0045786;negative regulation of progression through cell cycle;3.25034110948382e-05!GO:0005791;rough endoplasmic reticulum;3.49112172294017e-05!GO:0016564;transcription repressor activity;3.52082302585816e-05!GO:0032559;adenyl ribonucleotide binding;4.17636321428066e-05!GO:0044255;cellular lipid metabolic process;4.27838305362022e-05!GO:0006118;electron transport;4.45761001805129e-05!GO:0031968;organelle outer membrane;4.75503023010599e-05!GO:0005524;ATP binding;4.78896403666535e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.94843578936872e-05!GO:0005667;transcription factor complex;5.4320091529753e-05!GO:0016567;protein ubiquitination;5.58028345054755e-05!GO:0032446;protein modification by small protein conjugation;5.58028345054755e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.42005636533499e-05!GO:0015399;primary active transmembrane transporter activity;6.42005636533499e-05!GO:0065002;intracellular protein transport across a membrane;6.70970673209362e-05!GO:0007049;cell cycle;6.80458093376888e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;7.06795806636959e-05!GO:0051726;regulation of cell cycle;7.28184786426842e-05!GO:0000074;regulation of progression through cell cycle;7.49676070652446e-05!GO:0005525;GTP binding;8.3392468891272e-05!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;8.479791619011e-05!GO:0016859;cis-trans isomerase activity;8.7927540814122e-05!GO:0000245;spliceosome assembly;9.28702231605941e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;9.58470897044807e-05!GO:0000151;ubiquitin ligase complex;9.8530246843481e-05!GO:0030036;actin cytoskeleton organization and biogenesis;0.000114198757602882!GO:0005905;coated pit;0.000128143778645496!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000140687481487144!GO:0030867;rough endoplasmic reticulum membrane;0.000144743362808959!GO:0033116;ER-Golgi intermediate compartment membrane;0.000168420457841531!GO:0048468;cell development;0.00016861883204013!GO:0006974;response to DNA damage stimulus;0.000169067938259593!GO:0046467;membrane lipid biosynthetic process;0.000185234217095302!GO:0007050;cell cycle arrest;0.000185785623129788!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000190275039018003!GO:0006979;response to oxidative stress;0.00019256447913029!GO:0006366;transcription from RNA polymerase II promoter;0.000195598959500235!GO:0005741;mitochondrial outer membrane;0.000215071042122718!GO:0043284;biopolymer biosynthetic process;0.000215265722282417!GO:0008092;cytoskeletal protein binding;0.000231368500679891!GO:0000314;organellar small ribosomal subunit;0.000243438843656622!GO:0005763;mitochondrial small ribosomal subunit;0.000243438843656622!GO:0006612;protein targeting to membrane;0.000270442557512431!GO:0004576;oligosaccharyl transferase activity;0.000293151826421427!GO:0005048;signal sequence binding;0.000336329729012262!GO:0043021;ribonucleoprotein binding;0.000336871515342895!GO:0031324;negative regulation of cellular metabolic process;0.000367281951600587!GO:0032787;monocarboxylic acid metabolic process;0.00042916988810122!GO:0043492;ATPase activity, coupled to movement of substances;0.000431484510707994!GO:0032561;guanyl ribonucleotide binding;0.000431484510707994!GO:0019001;guanyl nucleotide binding;0.000431484510707994!GO:0046489;phosphoinositide biosynthetic process;0.000477722874481478!GO:0022890;inorganic cation transmembrane transporter activity;0.000481519660144127!GO:0043623;cellular protein complex assembly;0.000506906059277449!GO:0008026;ATP-dependent helicase activity;0.000508657628917785!GO:0008250;oligosaccharyl transferase complex;0.000530986509753588!GO:0006629;lipid metabolic process;0.000546120221308492!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00055772837324706!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000566479120085727!GO:0009165;nucleotide biosynthetic process;0.000578112355334607!GO:0009719;response to endogenous stimulus;0.000622340993334599!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000627799773318739!GO:0030308;negative regulation of cell growth;0.00064894787424322!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000685194034627937!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000699379930650002!GO:0005885;Arp2/3 protein complex;0.000703000762909972!GO:0045792;negative regulation of cell size;0.000724123649256052!GO:0006818;hydrogen transport;0.000735808222382286!GO:0016740;transferase activity;0.000735808222382286!GO:0005975;carbohydrate metabolic process;0.000744789019461531!GO:0006793;phosphorus metabolic process;0.00077568676192045!GO:0006796;phosphate metabolic process;0.00077568676192045!GO:0006650;glycerophospholipid metabolic process;0.000788908103578337!GO:0051170;nuclear import;0.000788908103578337!GO:0005643;nuclear pore;0.000797557880206591!GO:0019843;rRNA binding;0.000814266493603237!GO:0006364;rRNA processing;0.000820188206986364!GO:0050662;coenzyme binding;0.000820188206986364!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000836410350532492!GO:0030029;actin filament-based process;0.000836539344313165!GO:0051287;NAD binding;0.000850314922015144!GO:0015992;proton transport;0.000850314922015144!GO:0006066;alcohol metabolic process;0.000898128445487297!GO:0051920;peroxiredoxin activity;0.000905633327293935!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000921687349193049!GO:0003697;single-stranded DNA binding;0.000951994705006549!GO:0048522;positive regulation of cellular process;0.000954326105101545!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00100281758611467!GO:0006606;protein import into nucleus;0.0010298447438023!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00104100066743173!GO:0043681;protein import into mitochondrion;0.00109365995030346!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00118019062256839!GO:0006635;fatty acid beta-oxidation;0.00125527296891144!GO:0006790;sulfur metabolic process;0.00126636508705431!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00130110390091008!GO:0015002;heme-copper terminal oxidase activity;0.00130110390091008!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00130110390091008!GO:0004129;cytochrome-c oxidase activity;0.00130110390091008!GO:0030663;COPI coated vesicle membrane;0.00136486384785128!GO:0030126;COPI vesicle coat;0.00136486384785128!GO:0009892;negative regulation of metabolic process;0.0013807226931283!GO:0016072;rRNA metabolic process;0.0013807226931283!GO:0016126;sterol biosynthetic process;0.00147976913259782!GO:0016310;phosphorylation;0.00149688350688252!GO:0046930;pore complex;0.00152948502261468!GO:0022402;cell cycle process;0.00159429892672426!GO:0006839;mitochondrial transport;0.00166064765366594!GO:0005769;early endosome;0.00174250192616808!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00174250192616808!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00174250192616808!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00174250192616808!GO:0003724;RNA helicase activity;0.00180670579130252!GO:0030137;COPI-coated vesicle;0.00186838270260206!GO:0016044;membrane organization and biogenesis;0.00187460161395403!GO:0018196;peptidyl-asparagine modification;0.00187908864918674!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00187908864918674!GO:0019318;hexose metabolic process;0.00199096382236549!GO:0048471;perinuclear region of cytoplasm;0.00203675408446539!GO:0000902;cell morphogenesis;0.00204372855930115!GO:0032989;cellular structure morphogenesis;0.00204372855930115!GO:0006414;translational elongation;0.00222324192027062!GO:0007243;protein kinase cascade;0.00227204960801059!GO:0030176;integral to endoplasmic reticulum membrane;0.00227204960801059!GO:0030658;transport vesicle membrane;0.00231808528493833!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00236121365808459!GO:0019899;enzyme binding;0.00239616462707873!GO:0045926;negative regulation of growth;0.00252382466685187!GO:0003899;DNA-directed RNA polymerase activity;0.00263617745489209!GO:0005996;monosaccharide metabolic process;0.0026900220500012!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00270573370963101!GO:0005774;vacuolar membrane;0.00278966845841733!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00290294791151897!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.00312173050790159!GO:0030118;clathrin coat;0.00312173050790159!GO:0006281;DNA repair;0.00324695381942698!GO:0031902;late endosome membrane;0.00325176875261886!GO:0043566;structure-specific DNA binding;0.00335479488921353!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00360954557175512!GO:0004386;helicase activity;0.00366674464741847!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00367772238647631!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00367772238647631!GO:0051540;metal cluster binding;0.0037068452092213!GO:0051536;iron-sulfur cluster binding;0.0037068452092213!GO:0065004;protein-DNA complex assembly;0.00370996269470295!GO:0046483;heterocycle metabolic process;0.00371968728556898!GO:0016779;nucleotidyltransferase activity;0.00381830044137898!GO:0006891;intra-Golgi vesicle-mediated transport;0.00405498091069046!GO:0005869;dynactin complex;0.00407660461393749!GO:0030132;clathrin coat of coated pit;0.00415068186049016!GO:0006626;protein targeting to mitochondrion;0.00421620595259778!GO:0051427;hormone receptor binding;0.0042253148610907!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00422722152557676!GO:0006497;protein amino acid lipidation;0.00433431552430097!GO:0007040;lysosome organization and biogenesis;0.00434737679807835!GO:0044420;extracellular matrix part;0.00443731987453592!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0045455007857291!GO:0005520;insulin-like growth factor binding;0.00462738746277487!GO:0042158;lipoprotein biosynthetic process;0.00471115624969601!GO:0006631;fatty acid metabolic process;0.00475802381353128!GO:0006643;membrane lipid metabolic process;0.00475802381353128!GO:0048037;cofactor binding;0.00475802381353128!GO:0006506;GPI anchor biosynthetic process;0.00494421370459009!GO:0007006;mitochondrial membrane organization and biogenesis;0.00496293203301363!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00524817332527823!GO:0006892;post-Golgi vesicle-mediated transport;0.00528156221291161!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00532528154264774!GO:0048500;signal recognition particle;0.00532528154264774!GO:0006695;cholesterol biosynthetic process;0.00537738001997972!GO:0003713;transcription coactivator activity;0.00558168652849686!GO:0030027;lamellipodium;0.00603371930479589!GO:0030660;Golgi-associated vesicle membrane;0.00634545143222128!GO:0004177;aminopeptidase activity;0.00637337757348871!GO:0006644;phospholipid metabolic process;0.00651926425233323!GO:0030384;phosphoinositide metabolic process;0.00663400042546162!GO:0005583;fibrillar collagen;0.00665293458214215!GO:0001726;ruffle;0.00674965364862688!GO:0044437;vacuolar part;0.00678601863169108!GO:0000096;sulfur amino acid metabolic process;0.00681139310533815!GO:0005777;peroxisome;0.0070294199866608!GO:0042579;microbody;0.0070294199866608!GO:0006509;membrane protein ectodomain proteolysis;0.00709395794933612!GO:0033619;membrane protein proteolysis;0.00709395794933612!GO:0035257;nuclear hormone receptor binding;0.00716700320560002!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00770862548281327!GO:0045045;secretory pathway;0.0082072378372888!GO:0030134;ER to Golgi transport vesicle;0.00831262136145707!GO:0043488;regulation of mRNA stability;0.00871737601375053!GO:0043487;regulation of RNA stability;0.00871737601375053!GO:0006403;RNA localization;0.00882688103130342!GO:0044438;microbody part;0.00882688103130342!GO:0044439;peroxisomal part;0.00882688103130342!GO:0017166;vinculin binding;0.00885823345074222!GO:0006505;GPI anchor metabolic process;0.00886671616743625!GO:0007033;vacuole organization and biogenesis;0.00889241278468166!GO:0050657;nucleic acid transport;0.00889241278468166!GO:0051236;establishment of RNA localization;0.00889241278468166!GO:0050658;RNA transport;0.00889241278468166!GO:0035258;steroid hormone receptor binding;0.00889241278468166!GO:0030041;actin filament polymerization;0.00898595442683591!GO:0006006;glucose metabolic process;0.00898595442683591!GO:0016197;endosome transport;0.00916578710683093!GO:0016070;RNA metabolic process;0.00916885888400675!GO:0016860;intramolecular oxidoreductase activity;0.00926375897217495!GO:0030127;COPII vesicle coat;0.00937039887714386!GO:0012507;ER to Golgi transport vesicle membrane;0.00937039887714386!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00946160948623048!GO:0048487;beta-tubulin binding;0.00956081834938519!GO:0051329;interphase of mitotic cell cycle;0.00969603455337771!GO:0005765;lysosomal membrane;0.00983792904898574!GO:0003779;actin binding;0.00993335713487357!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00996896898545563!GO:0031072;heat shock protein binding;0.0101510669083269!GO:0005581;collagen;0.0101768456811279!GO:0050811;GABA receptor binding;0.0103358021909387!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0103607483208786!GO:0045047;protein targeting to ER;0.0103607483208786!GO:0051325;interphase;0.0107381939252725!GO:0051128;regulation of cellular component organization and biogenesis;0.0108742878553664!GO:0006778;porphyrin metabolic process;0.0109137924917891!GO:0033013;tetrapyrrole metabolic process;0.0109137924917891!GO:0006740;NADPH regeneration;0.0110331358210836!GO:0006098;pentose-phosphate shunt;0.0110331358210836!GO:0048518;positive regulation of biological process;0.0119631376118944!GO:0008652;amino acid biosynthetic process;0.0121746538508104!GO:0051252;regulation of RNA metabolic process;0.0122627515486584!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0122627515486584!GO:0030659;cytoplasmic vesicle membrane;0.0123555526484488!GO:0031903;microbody membrane;0.0125044280878692!GO:0005778;peroxisomal membrane;0.0125044280878692!GO:0008186;RNA-dependent ATPase activity;0.0129233230461892!GO:0016125;sterol metabolic process;0.0131062767421243!GO:0006383;transcription from RNA polymerase III promoter;0.0132726374515089!GO:0003746;translation elongation factor activity;0.0133130321424672!GO:0003676;nucleic acid binding;0.0139584379680422!GO:0007010;cytoskeleton organization and biogenesis;0.0141847972958651!GO:0051539;4 iron, 4 sulfur cluster binding;0.0144364522561904!GO:0065009;regulation of a molecular function;0.0149598168608943!GO:0033559;unsaturated fatty acid metabolic process;0.0149598168608943!GO:0006636;unsaturated fatty acid biosynthetic process;0.0149598168608943!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0150968114287794!GO:0016272;prefoldin complex;0.0153522178637878!GO:0043065;positive regulation of apoptosis;0.0154292703430064!GO:0035035;histone acetyltransferase binding;0.015517415330377!GO:0030145;manganese ion binding;0.015530885300936!GO:0008632;apoptotic program;0.015530885300936!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.015622836402991!GO:0042802;identical protein binding;0.0161338405043973!GO:0043068;positive regulation of programmed cell death;0.0163155322199704!GO:0005801;cis-Golgi network;0.0163155322199704!GO:0019395;fatty acid oxidation;0.0163994844352738!GO:0001527;microfibril;0.016981307065588!GO:0008312;7S RNA binding;0.0171733065242281!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.0173575044958886!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0176831455188154!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0177524881833361!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0177524881833361!GO:0050794;regulation of cellular process;0.01797179629981!GO:0030125;clathrin vesicle coat;0.0180267027985567!GO:0030665;clathrin coated vesicle membrane;0.0180267027985567!GO:0051087;chaperone binding;0.018101557566231!GO:0008139;nuclear localization sequence binding;0.0181126206146957!GO:0051168;nuclear export;0.0182107199270572!GO:0003729;mRNA binding;0.0185269676756371!GO:0030521;androgen receptor signaling pathway;0.0186320083364955!GO:0016481;negative regulation of transcription;0.0186853243626286!GO:0016563;transcription activator activity;0.0188348028667842!GO:0005684;U2-dependent spliceosome;0.0192280302148412!GO:0030880;RNA polymerase complex;0.0192981513899391!GO:0043433;negative regulation of transcription factor activity;0.0197738045176141!GO:0046519;sphingoid metabolic process;0.0199429320990089!GO:0007264;small GTPase mediated signal transduction;0.0202401665070635!GO:0045639;positive regulation of myeloid cell differentiation;0.0208960638441498!GO:0016051;carbohydrate biosynthetic process;0.0210545584345609!GO:0042168;heme metabolic process;0.0216044158342964!GO:0007034;vacuolar transport;0.0218369462734176!GO:0015631;tubulin binding;0.0224149524793525!GO:0000030;mannosyltransferase activity;0.0224758665210883!GO:0008180;signalosome;0.0227021779585325!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.023023941682208!GO:0007160;cell-matrix adhesion;0.0232174196940163!GO:0006325;establishment and/or maintenance of chromatin architecture;0.0243163462785875!GO:0031589;cell-substrate adhesion;0.0244804083223968!GO:0005586;collagen type III;0.0247043747583215!GO:0045936;negative regulation of phosphate metabolic process;0.0247043747583215!GO:0005862;muscle thin filament tropomyosin;0.0248542334142141!GO:0008154;actin polymerization and/or depolymerization;0.0254476026610976!GO:0030119;AP-type membrane coat adaptor complex;0.0262158261963518!GO:0008147;structural constituent of bone;0.0264978037810855!GO:0006749;glutathione metabolic process;0.0269969125290263!GO:0004004;ATP-dependent RNA helicase activity;0.0271308755623322!GO:0006595;polyamine metabolic process;0.0273518368934012!GO:0030140;trans-Golgi network transport vesicle;0.0278865931155509!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0278965220062139!GO:0006779;porphyrin biosynthetic process;0.0286036321147191!GO:0033014;tetrapyrrole biosynthetic process;0.0286036321147191!GO:0043022;ribosome binding;0.029010984560309!GO:0005813;centrosome;0.029010984560309!GO:0005595;collagen type XII;0.0291963998508171!GO:0006807;nitrogen compound metabolic process;0.0292350254861515!GO:0030518;steroid hormone receptor signaling pathway;0.0292915289594753!GO:0000278;mitotic cell cycle;0.0296060644978953!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0299490984062652!GO:0046394;carboxylic acid biosynthetic process;0.0299490984062652!GO:0016053;organic acid biosynthetic process;0.0299490984062652!GO:0006518;peptide metabolic process;0.0305639110352045!GO:0003756;protein disulfide isomerase activity;0.0307711948713195!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0307711948713195!GO:0032940;secretion by cell;0.0308446543870946!GO:0048144;fibroblast proliferation;0.0316957393947879!GO:0048145;regulation of fibroblast proliferation;0.0316957393947879!GO:0006352;transcription initiation;0.0318769952489943!GO:0009967;positive regulation of signal transduction;0.0319395711059559!GO:0001725;stress fiber;0.0325029838632527!GO:0032432;actin filament bundle;0.0325029838632527!GO:0006739;NADP metabolic process;0.0327240013968608!GO:0007021;tubulin folding;0.0328062403075793!GO:0003711;transcription elongation regulator activity;0.0345507983277844!GO:0006354;RNA elongation;0.0346268203684981!GO:0044433;cytoplasmic vesicle part;0.0347167262822555!GO:0031418;L-ascorbic acid binding;0.0348660048223166!GO:0031272;regulation of pseudopodium formation;0.0352739355240941!GO:0031269;pseudopodium formation;0.0352739355240941!GO:0031344;regulation of cell projection organization and biogenesis;0.0352739355240941!GO:0031268;pseudopodium organization and biogenesis;0.0352739355240941!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0352739355240941!GO:0031274;positive regulation of pseudopodium formation;0.0352739355240941!GO:0050681;androgen receptor binding;0.0352827399828557!GO:0008320;protein transmembrane transporter activity;0.0353195431843382!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0353326296968901!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0354036043906962!GO:0000428;DNA-directed RNA polymerase complex;0.0354036043906962!GO:0000049;tRNA binding;0.0357934624713238!GO:0006323;DNA packaging;0.0360493810329501!GO:0007041;lysosomal transport;0.0360866850711614!GO:0031529;ruffle organization and biogenesis;0.0361436290335664!GO:0005832;chaperonin-containing T-complex;0.0367458618063788!GO:0030503;regulation of cell redox homeostasis;0.036753397288237!GO:0005591;collagen type VIII;0.0369694673435672!GO:0005598;short-chain collagen;0.0369694673435672!GO:0005815;microtubule organizing center;0.0381261472711321!GO:0006007;glucose catabolic process;0.0386034976554858!GO:0006672;ceramide metabolic process;0.0388260448355695!GO:0006333;chromatin assembly or disassembly;0.0390725850617252!GO:0031406;carboxylic acid binding;0.0390725850617252!GO:0005100;Rho GTPase activator activity;0.04004138198468!GO:0006914;autophagy;0.040785823682785!GO:0001666;response to hypoxia;0.041110632343113!GO:0006950;response to stress;0.0422905577935684!GO:0030508;thiol-disulfide exchange intermediate activity;0.0427177465281347!GO:0030131;clathrin adaptor complex;0.0428635973495663!GO:0051028;mRNA transport;0.0433134314238981!GO:0006633;fatty acid biosynthetic process;0.0438895702588034!GO:0051101;regulation of DNA binding;0.0443886522873265!GO:0012506;vesicle membrane;0.0455928476154062!GO:0030911;TPR domain binding;0.0456725810349349!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0456826822243205!GO:0000082;G1/S transition of mitotic cell cycle;0.0460701445616971!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0462307687123715!GO:0006260;DNA replication;0.0464944468057577!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0468868772023609!GO:0006693;prostaglandin metabolic process;0.0472254367635656!GO:0006692;prostanoid metabolic process;0.0472254367635656!GO:0007030;Golgi organization and biogenesis;0.0472616188812793!GO:0019838;growth factor binding;0.0474609784347241!GO:0031901;early endosome membrane;0.0477129706212306!GO:0008286;insulin receptor signaling pathway;0.0478131282554213!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0481822679587129!GO:0010257;NADH dehydrogenase complex assembly;0.0481822679587129!GO:0033108;mitochondrial respiratory chain complex assembly;0.0481822679587129!GO:0016568;chromatin modification;0.0481822679587129!GO:0006897;endocytosis;0.0491435301453669!GO:0010324;membrane invagination;0.0491435301453669!GO:0030833;regulation of actin filament polymerization;0.0492010062991734!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0494162090244323!GO:0000209;protein polyubiquitination;0.049548822842921!GO:0048146;positive regulation of fibroblast proliferation;0.0499594356641368 | |||
|sample_id=11474 | |sample_id=11474 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=NKX2-2,8:3.2301192182;UFEwm:2.47125669882;NKX3-1:2.29281628889;ALX4:2.28453635403;PAX1,9:1.97971881369;FOXL1:1.92894858496;ESR1:1.92258024419;HES1:1.88005432967;EVI1:1.82649011701;HMX1:1.81243663521;IKZF1:1.79541941908;ZNF238:1.74057131838;NKX2-1,4:1.73377249797;XBP1:1.72565575697;GZF1:1.71006256547;GLI1..3:1.70149216543;TAL1_TCF{3,4,12}:1.63034818448;GCM1,2:1.60988320237;SRF:1.59488338875;ATF6:1.51671177817;RXRA_VDR{dimer}:1.43812249038;TFAP4:1.37323447113;HOX{A6,A7,B6,B7}:1.25829313772;TEAD1:1.24559077478;NKX3-2:1.24127813593;NR6A1:1.20721249354;EBF1:1.19095575064;RXR{A,B,G}:1.17318434566;AR:1.16003667088;TP53:1.15260411509;NFE2L1:1.11520742896;NANOG{mouse}:1.11472466016;HMGA1,2:1.08521174027;HOX{A4,D4}:1.08153780501;KLF4:1.06941837384;ZNF423:1.06677612198;NFATC1..3:1.03982125573;MYBL2:1.038786496;NR3C1:1.02907015766;TBP:1.01162954665;EN1,2:1.00002538708;NR1H4:0.987631212571;TEF:0.940204835647;HOX{A5,B5}:0.938913999958;GTF2A1,2:0.915859409223;TLX1..3_NFIC{dimer}:0.912049720221;SMAD1..7,9:0.899480903865;MTE{core}:0.88730779224;ARID5B:0.844653861116;TFCP2:0.835623592685;MAFB:0.81122102152;TFAP2{A,C}:0.755716067447;MAZ:0.664609866667;GTF2I:0.639945625284;GATA4:0.616923420354;MTF1:0.552918862852;FOXO1,3,4:0.532186373518;HIF1A:0.523517783724;DBP:0.502103973737;PAX5:0.498530128578;FOX{I1,J2}:0.486322146071;LHX3,4:0.464240375661;ZNF148:0.449477524255;SPZ1:0.427586763352;TBX4,5:0.427503828959;GFI1B:0.425623885501;TFAP2B:0.41661006538;HAND1,2:0.376182882538;ESRRA:0.307827690427;NHLH1,2:0.298293907237;FOXA2:0.281383657393;ZBTB6:0.26988909364;STAT2,4,6:0.264285708143;POU6F1:0.260486425854;MEF2{A,B,C,D}:0.245144835921;ZIC1..3:0.233942826141;HIC1:0.233658213267;ONECUT1,2:0.225231559049;PPARG:0.197414633576;HSF1,2:0.171726207583;REST:0.143001969404;PATZ1:0.13311268862;HLF:0.12656095738;MYB:0.115487897032;PAX6:0.100294700139;EP300:0.100252048896;SOX5:0.0975963053473;FOXP3:0.0958244718164;NFE2L2:0.0918525946255;XCPE1{core}:0.0877061599722;NFIL3:0.0853344185445;TGIF1:0.0554774993733;HOXA9_MEIS1:0.00725389232402;PRDM1:-0.0491488742379;SOX17:-0.057223269637;bHLH_family:-0.0596934489273;MYFfamily:-0.090957258266;HNF4A_NR2F1,2:-0.125075624382;NR5A1,2:-0.132912532512;MZF1:-0.14340898198;FOX{F1,F2,J1}:-0.211897398613;ALX1:-0.230349390971;CDC5L:-0.244316803536;PAX3,7:-0.244477338705;BACH2:-0.255266654529;FOX{D1,D2}:-0.282756508468;HNF1A:-0.285930514067;STAT1,3:-0.299172303821;PAX2:-0.303561395456;CEBPA,B_DDIT3:-0.342856393981;NFIX:-0.3454012752;AIRE:-0.387843315267;MED-1{core}:-0.394749018019;T:-0.397378308002;RREB1:-0.408529206209;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.410411926135;NFE2:-0.452661491743;DMAP1_NCOR{1,2}_SMARC:-0.472234123511;IKZF2:-0.473742413;OCT4_SOX2{dimer}:-0.47737610898;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.479494087258;FOSL2:-0.500807918145;GFI1:-0.532425406018;STAT5{A,B}:-0.537950083036;NFKB1_REL_RELA:-0.539616156417;FOS_FOS{B,L1}_JUN{B,D}:-0.541739464284;SOX2:-0.544720366592;SREBF1,2:-0.549471512314;NKX2-3_NKX2-5:-0.565297540317;SP1:-0.581200409906;LEF1_TCF7_TCF7L1,2:-0.590585314645;SPI1:-0.599277735609;SNAI1..3:-0.631521448214;ADNP_IRX_SIX_ZHX:-0.637878691491;IRF1,2:-0.642061033619;FOXM1:-0.645419682423;ZNF143:-0.672877227991;TOPORS:-0.682198414681;MYOD1:-0.705336205478;JUN:-0.709241591912;ZFP161:-0.736730265715;ETS1,2:-0.756521540827;ZNF384:-0.756994488135;POU3F1..4:-0.763697883662;EGR1..3:-0.769490489599;TLX2:-0.788417678021;RFX1:-0.796272715871;ATF5_CREB3:-0.796396088179;NRF1:-0.798951885794;RUNX1..3:-0.803186097634;CRX:-0.81378639411;ELF1,2,4:-0.845034437181;LMO2:-0.846038625692;ZEB1:-0.851005979146;RORA:-0.856526676164;PAX4:-0.861194335568;FOXD3:-0.873233772678;ELK1,4_GABP{A,B1}:-0.886715376402;YY1:-0.892077445757;SPIB:-0.898079390664;ATF4:-0.898106706384;RFX2..5_RFXANK_RFXAP:-0.905529990845;GATA6:-0.921489295961;PDX1:-0.923127597747;CDX1,2,4:-0.94208842791;ZBTB16:-0.951089225689;AHR_ARNT_ARNT2:-0.959517931002;ATF2:-0.967454178577;POU1F1:-1.01780390635;CREB1:-1.05452514246;HBP1_HMGB_SSRP1_UBTF:-1.09670078904;BREu{core}:-1.09774685626;IRF7:-1.10601158864;FOXP1:-1.13283211795;PRRX1,2:-1.1582490591;POU5F1:-1.19056766905;NFY{A,B,C}:-1.22482878253;TFDP1:-1.23689695617;CUX2:-1.31420955623;PBX1:-1.32391824839;SOX{8,9,10}:-1.34716075131;PITX1..3:-1.35197380026;NKX6-1,2:-1.39554522161;PAX8:-1.40696899989;NANOG:-1.43054407564;E2F1..5:-1.49051829055;FOXQ1:-1.52897617116;VSX1,2:-1.54170653305;BPTF:-1.61794530055;FOXN1:-1.69683672979;POU2F1..3:-1.81212513467;RBPJ:-2.26722752101 | |top_motifs=NKX2-2,8:3.2301192182;UFEwm:2.47125669882;NKX3-1:2.29281628889;ALX4:2.28453635403;PAX1,9:1.97971881369;FOXL1:1.92894858496;ESR1:1.92258024419;HES1:1.88005432967;EVI1:1.82649011701;HMX1:1.81243663521;IKZF1:1.79541941908;ZNF238:1.74057131838;NKX2-1,4:1.73377249797;XBP1:1.72565575697;GZF1:1.71006256547;GLI1..3:1.70149216543;TAL1_TCF{3,4,12}:1.63034818448;GCM1,2:1.60988320237;SRF:1.59488338875;ATF6:1.51671177817;RXRA_VDR{dimer}:1.43812249038;TFAP4:1.37323447113;HOX{A6,A7,B6,B7}:1.25829313772;TEAD1:1.24559077478;NKX3-2:1.24127813593;NR6A1:1.20721249354;EBF1:1.19095575064;RXR{A,B,G}:1.17318434566;AR:1.16003667088;TP53:1.15260411509;NFE2L1:1.11520742896;NANOG{mouse}:1.11472466016;HMGA1,2:1.08521174027;HOX{A4,D4}:1.08153780501;KLF4:1.06941837384;ZNF423:1.06677612198;NFATC1..3:1.03982125573;MYBL2:1.038786496;NR3C1:1.02907015766;TBP:1.01162954665;EN1,2:1.00002538708;NR1H4:0.987631212571;TEF:0.940204835647;HOX{A5,B5}:0.938913999958;GTF2A1,2:0.915859409223;TLX1..3_NFIC{dimer}:0.912049720221;SMAD1..7,9:0.899480903865;MTE{core}:0.88730779224;ARID5B:0.844653861116;TFCP2:0.835623592685;MAFB:0.81122102152;TFAP2{A,C}:0.755716067447;MAZ:0.664609866667;GTF2I:0.639945625284;GATA4:0.616923420354;MTF1:0.552918862852;FOXO1,3,4:0.532186373518;HIF1A:0.523517783724;DBP:0.502103973737;PAX5:0.498530128578;FOX{I1,J2}:0.486322146071;LHX3,4:0.464240375661;ZNF148:0.449477524255;SPZ1:0.427586763352;TBX4,5:0.427503828959;GFI1B:0.425623885501;TFAP2B:0.41661006538;HAND1,2:0.376182882538;ESRRA:0.307827690427;NHLH1,2:0.298293907237;FOXA2:0.281383657393;ZBTB6:0.26988909364;STAT2,4,6:0.264285708143;POU6F1:0.260486425854;MEF2{A,B,C,D}:0.245144835921;ZIC1..3:0.233942826141;HIC1:0.233658213267;ONECUT1,2:0.225231559049;PPARG:0.197414633576;HSF1,2:0.171726207583;REST:0.143001969404;PATZ1:0.13311268862;HLF:0.12656095738;MYB:0.115487897032;PAX6:0.100294700139;EP300:0.100252048896;SOX5:0.0975963053473;FOXP3:0.0958244718164;NFE2L2:0.0918525946255;XCPE1{core}:0.0877061599722;NFIL3:0.0853344185445;TGIF1:0.0554774993733;HOXA9_MEIS1:0.00725389232402;PRDM1:-0.0491488742379;SOX17:-0.057223269637;bHLH_family:-0.0596934489273;MYFfamily:-0.090957258266;HNF4A_NR2F1,2:-0.125075624382;NR5A1,2:-0.132912532512;MZF1:-0.14340898198;FOX{F1,F2,J1}:-0.211897398613;ALX1:-0.230349390971;CDC5L:-0.244316803536;PAX3,7:-0.244477338705;BACH2:-0.255266654529;FOX{D1,D2}:-0.282756508468;HNF1A:-0.285930514067;STAT1,3:-0.299172303821;PAX2:-0.303561395456;CEBPA,B_DDIT3:-0.342856393981;NFIX:-0.3454012752;AIRE:-0.387843315267;MED-1{core}:-0.394749018019;T:-0.397378308002;RREB1:-0.408529206209;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.410411926135;NFE2:-0.452661491743;DMAP1_NCOR{1,2}_SMARC:-0.472234123511;IKZF2:-0.473742413;OCT4_SOX2{dimer}:-0.47737610898;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.479494087258;FOSL2:-0.500807918145;GFI1:-0.532425406018;STAT5{A,B}:-0.537950083036;NFKB1_REL_RELA:-0.539616156417;FOS_FOS{B,L1}_JUN{B,D}:-0.541739464284;SOX2:-0.544720366592;SREBF1,2:-0.549471512314;NKX2-3_NKX2-5:-0.565297540317;SP1:-0.581200409906;LEF1_TCF7_TCF7L1,2:-0.590585314645;SPI1:-0.599277735609;SNAI1..3:-0.631521448214;ADNP_IRX_SIX_ZHX:-0.637878691491;IRF1,2:-0.642061033619;FOXM1:-0.645419682423;ZNF143:-0.672877227991;TOPORS:-0.682198414681;MYOD1:-0.705336205478;JUN:-0.709241591912;ZFP161:-0.736730265715;ETS1,2:-0.756521540827;ZNF384:-0.756994488135;POU3F1..4:-0.763697883662;EGR1..3:-0.769490489599;TLX2:-0.788417678021;RFX1:-0.796272715871;ATF5_CREB3:-0.796396088179;NRF1:-0.798951885794;RUNX1..3:-0.803186097634;CRX:-0.81378639411;ELF1,2,4:-0.845034437181;LMO2:-0.846038625692;ZEB1:-0.851005979146;RORA:-0.856526676164;PAX4:-0.861194335568;FOXD3:-0.873233772678;ELK1,4_GABP{A,B1}:-0.886715376402;YY1:-0.892077445757;SPIB:-0.898079390664;ATF4:-0.898106706384;RFX2..5_RFXANK_RFXAP:-0.905529990845;GATA6:-0.921489295961;PDX1:-0.923127597747;CDX1,2,4:-0.94208842791;ZBTB16:-0.951089225689;AHR_ARNT_ARNT2:-0.959517931002;ATF2:-0.967454178577;POU1F1:-1.01780390635;CREB1:-1.05452514246;HBP1_HMGB_SSRP1_UBTF:-1.09670078904;BREu{core}:-1.09774685626;IRF7:-1.10601158864;FOXP1:-1.13283211795;PRRX1,2:-1.1582490591;POU5F1:-1.19056766905;NFY{A,B,C}:-1.22482878253;TFDP1:-1.23689695617;CUX2:-1.31420955623;PBX1:-1.32391824839;SOX{8,9,10}:-1.34716075131;PITX1..3:-1.35197380026;NKX6-1,2:-1.39554522161;PAX8:-1.40696899989;NANOG:-1.43054407564;E2F1..5:-1.49051829055;FOXQ1:-1.52897617116;VSX1,2:-1.54170653305;BPTF:-1.61794530055;FOXN1:-1.69683672979;POU2F1..3:-1.81212513467;RBPJ:-2.26722752101 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11474-119C7;search_select_hide=table117:FF:11474-119C7 | |||
}} | }} | ||
Latest revision as of 18:03, 4 June 2020
| Name: | Adipocyte - omental, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12067 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12067
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12067
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.563 |
| 10 | 10 | 0.825 |
| 100 | 100 | 0.822 |
| 101 | 101 | 0.328 |
| 102 | 102 | 0.0778 |
| 103 | 103 | 0.238 |
| 104 | 104 | 0.798 |
| 105 | 105 | 0.108 |
| 106 | 106 | 0.049 |
| 107 | 107 | 0.0892 |
| 108 | 108 | 0.158 |
| 109 | 109 | 0.373 |
| 11 | 11 | 0.356 |
| 110 | 110 | 0.279 |
| 111 | 111 | 0.258 |
| 112 | 112 | 0.294 |
| 113 | 113 | 0.713 |
| 114 | 114 | 0.158 |
| 115 | 115 | 0.00501 |
| 116 | 116 | 0.148 |
| 117 | 117 | 0.838 |
| 118 | 118 | 0.684 |
| 119 | 119 | 0.361 |
| 12 | 12 | 0.358 |
| 120 | 120 | 0.514 |
| 121 | 121 | 0.289 |
| 122 | 122 | 0.333 |
| 123 | 123 | 0.133 |
| 124 | 124 | 0.841 |
| 125 | 125 | 0.934 |
| 126 | 126 | 0.717 |
| 127 | 127 | 0.747 |
| 128 | 128 | 0.179 |
| 129 | 129 | 0.46 |
| 13 | 13 | 0.856 |
| 130 | 130 | 0.972 |
| 131 | 131 | 0.809 |
| 132 | 132 | 0.136 |
| 133 | 133 | 0.866 |
| 134 | 134 | 0.701 |
| 135 | 135 | 0.235 |
| 136 | 136 | 0.744 |
| 137 | 137 | 0.789 |
| 138 | 138 | 0.69 |
| 139 | 139 | 0.117 |
| 14 | 14 | 0.429 |
| 140 | 140 | 0.872 |
| 141 | 141 | 0.918 |
| 142 | 142 | 0.736 |
| 143 | 143 | 0.575 |
| 144 | 144 | 0.881 |
| 145 | 145 | 0.78 |
| 146 | 146 | 0.759 |
| 147 | 147 | 0.0676 |
| 148 | 148 | 0.727 |
| 149 | 149 | 2.51059e-4 |
| 15 | 15 | 0.708 |
| 150 | 150 | 0.569 |
| 151 | 151 | 0.745 |
| 152 | 152 | 0.0312 |
| 153 | 153 | 0.548 |
| 154 | 154 | 0.991 |
| 155 | 155 | 0.2 |
| 156 | 156 | 0.973 |
| 157 | 157 | 0.718 |
| 158 | 158 | 0.137 |
| 159 | 159 | 0.821 |
| 16 | 16 | 0.0218 |
| 160 | 160 | 0.1 |
| 161 | 161 | 0.75 |
| 162 | 162 | 0.64 |
| 163 | 163 | 0.872 |
| 164 | 164 | 0.439 |
| 165 | 165 | 0.98 |
| 166 | 166 | 0.355 |
| 167 | 167 | 0.314 |
| 168 | 168 | 0.837 |
| 169 | 169 | 0.0163 |
| 17 | 17 | 0.27 |
| 18 | 18 | 0.21 |
| 19 | 19 | 0.00735 |
| 2 | 2 | 0.311 |
| 20 | 20 | 0.387 |
| 21 | 21 | 0.356 |
| 22 | 22 | 0.126 |
| 23 | 23 | 0.0268 |
| 24 | 24 | 0.466 |
| 25 | 25 | 0.484 |
| 26 | 26 | 0.455 |
| 27 | 27 | 0.105 |
| 28 | 28 | 0.23 |
| 29 | 29 | 0.67 |
| 3 | 3 | 0.337 |
| 30 | 30 | 0.507 |
| 31 | 31 | 0.405 |
| 32 | 32 | 2.48961e-12 |
| 33 | 33 | 0.868 |
| 34 | 34 | 0.733 |
| 35 | 35 | 0.46 |
| 36 | 36 | 0.119 |
| 37 | 37 | 0.13 |
| 38 | 38 | 0.769 |
| 39 | 39 | 0.141 |
| 4 | 4 | 0.922 |
| 40 | 40 | 0.652 |
| 41 | 41 | 0.859 |
| 42 | 42 | 0.641 |
| 43 | 43 | 0.14 |
| 44 | 44 | 0.185 |
| 45 | 45 | 0.656 |
| 46 | 46 | 0.259 |
| 47 | 47 | 0.582 |
| 48 | 48 | 0.767 |
| 49 | 49 | 0.405 |
| 5 | 5 | 0.32 |
| 50 | 50 | 0.668 |
| 51 | 51 | 0.815 |
| 52 | 52 | 0.424 |
| 53 | 53 | 0.339 |
| 54 | 54 | 0.754 |
| 55 | 55 | 0.371 |
| 56 | 56 | 0.846 |
| 57 | 57 | 0.406 |
| 58 | 58 | 0.796 |
| 59 | 59 | 0.0407 |
| 6 | 6 | 0.566 |
| 60 | 60 | 0.384 |
| 61 | 61 | 0.363 |
| 62 | 62 | 0.612 |
| 63 | 63 | 0.158 |
| 64 | 64 | 0.7 |
| 65 | 65 | 0.0778 |
| 66 | 66 | 0.159 |
| 67 | 67 | 0.568 |
| 68 | 68 | 0.204 |
| 69 | 69 | 0.284 |
| 7 | 7 | 0.792 |
| 70 | 70 | 0.291 |
| 71 | 71 | 0.525 |
| 72 | 72 | 0.879 |
| 73 | 73 | 0.0272 |
| 74 | 74 | 0.215 |
| 75 | 75 | 0.442 |
| 76 | 76 | 0.449 |
| 77 | 77 | 0.0047 |
| 78 | 78 | 0.767 |
| 79 | 79 | 0.0203 |
| 8 | 8 | 0.159 |
| 80 | 80 | 0.769 |
| 81 | 81 | 0.361 |
| 82 | 82 | 0.0746 |
| 83 | 83 | 0.999 |
| 84 | 84 | 0.0689 |
| 85 | 85 | 0.00121 |
| 86 | 86 | 0.579 |
| 87 | 87 | 0.307 |
| 88 | 88 | 0.43 |
| 89 | 89 | 0.0138 |
| 9 | 9 | 0.32 |
| 90 | 90 | 0.67 |
| 91 | 91 | 0.634 |
| 92 | 92 | 0.0306 |
| 93 | 93 | 0.932 |
| 94 | 94 | 0.535 |
| 95 | 95 | 0.403 |
| 96 | 96 | 0.502 |
| 97 | 97 | 0.29 |
| 98 | 98 | 0.471 |
| 99 | 99 | 0.032 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12067
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000039 human adipocyte of omentum tissue sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000136 (fat cell)
0002615 (adipocyte of omentum tissue)
UBERON: Anatomy
0000468 (multi-cellular organism)
0003688 (omentum)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0000042 (serous membrane)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002417 (abdominal segment of trunk)
0002358 (peritoneum)
0000916 (abdomen)
0003684 (abdominal cavity)
0001178 (visceral peritoneum)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000039 (human adipocyte of omentum tissue sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
