FF:12239-129G7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004737 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008541;DRR009413;DRZ000838;DRZ002223;DRZ012188;DRZ013573 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0004923,UBERON:0005631,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000476,UBERON:0000478,UBERON:0000158,UBERON:0003124,UBERON:0000920 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000349,CL:0000255,CL:0000034,CL:0002541 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000038 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/chorionic%2520membrane%2520cells%252c%2520donor2.CNhs12506.12239-129G7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/chorionic%2520membrane%2520cells%252c%2520donor2.CNhs12506.12239-129G7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/chorionic%2520membrane%2520cells%252c%2520donor2.CNhs12506.12239-129G7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/chorionic%2520membrane%2520cells%252c%2520donor2.CNhs12506.12239-129G7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/chorionic%2520membrane%2520cells%252c%2520donor2.CNhs12506.12239-129G7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12239-129G7 | |id=FF:12239-129G7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000038 | ||
|is_obsolete= | |||
|library_id=CNhs12506 | |||
|library_id_phase_based=2:CNhs12506 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12239 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12239 | |||
|name=chorionic membrane cells, donor2 | |name=chorionic membrane cells, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12506,LSID918,release012,COMPLETED | |profile_hcage=CNhs12506,LSID918,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=6.3558 | |rna_weight_ug=6.3558 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.32854253117288e-212!GO:0005737;cytoplasm;2.84470559214795e-185!GO:0043226;organelle;2.74367384884025e-162!GO:0043229;intracellular organelle;7.50843284466875e-162!GO:0043231;intracellular membrane-bound organelle;5.67915254727512e-158!GO:0043227;membrane-bound organelle;6.83244756730071e-158!GO:0044444;cytoplasmic part;2.26306949698245e-125!GO:0044422;organelle part;6.32129403468395e-120!GO:0044446;intracellular organelle part;3.0350271112009e-118!GO:0005515;protein binding;2.7428894706444e-98!GO:0032991;macromolecular complex;7.98300001085544e-86!GO:0043170;macromolecule metabolic process;1.36200338317003e-73!GO:0030529;ribonucleoprotein complex;2.01343173381861e-73!GO:0044238;primary metabolic process;2.35279525042669e-73!GO:0044237;cellular metabolic process;2.11854827128157e-71!GO:0043233;organelle lumen;2.55794203951704e-57!GO:0031974;membrane-enclosed lumen;2.55794203951704e-57!GO:0003723;RNA binding;5.16223533804164e-57!GO:0005634;nucleus;4.59853360710971e-56!GO:0019538;protein metabolic process;5.23322679310593e-56!GO:0044428;nuclear part;1.64147759050872e-54!GO:0016043;cellular component organization and biogenesis;2.03908166096748e-52!GO:0005739;mitochondrion;5.06095756879087e-49!GO:0044260;cellular macromolecule metabolic process;9.5390543552469e-49!GO:0044267;cellular protein metabolic process;4.33669945579241e-48!GO:0031090;organelle membrane;7.46464186669825e-47!GO:0015031;protein transport;9.41707938161563e-47!GO:0033036;macromolecule localization;1.34902585723219e-46!GO:0005840;ribosome;6.25500729806194e-45!GO:0043234;protein complex;5.15033542244787e-44!GO:0045184;establishment of protein localization;7.7792671996337e-44!GO:0008104;protein localization;1.55356139416144e-43!GO:0006412;translation;1.56386998034121e-43!GO:0003735;structural constituent of ribosome;2.46069280970597e-39!GO:0043283;biopolymer metabolic process;1.29655161029389e-37!GO:0046907;intracellular transport;5.95169996768487e-36!GO:0006396;RNA processing;8.03260336051912e-36!GO:0005829;cytosol;1.5178377405684e-35!GO:0009059;macromolecule biosynthetic process;7.57298127385773e-35!GO:0033279;ribosomal subunit;1.53931241325278e-34!GO:0031981;nuclear lumen;1.60393136680753e-34!GO:0044429;mitochondrial part;5.84608427738378e-34!GO:0065003;macromolecular complex assembly;1.08388223005081e-33!GO:0031967;organelle envelope;6.23701354253231e-33!GO:0031975;envelope;1.56724769982762e-32!GO:0006886;intracellular protein transport;2.80738479843955e-31!GO:0009058;biosynthetic process;3.11145356886813e-31!GO:0022607;cellular component assembly;3.33128649359885e-31!GO:0016071;mRNA metabolic process;6.48454808904084e-31!GO:0008380;RNA splicing;2.09627014105364e-30!GO:0006996;organelle organization and biogenesis;4.77920983537449e-30!GO:0010467;gene expression;6.73743711700534e-30!GO:0044249;cellular biosynthetic process;4.27458210984474e-29!GO:0043228;non-membrane-bound organelle;1.84003755591926e-28!GO:0043232;intracellular non-membrane-bound organelle;1.84003755591926e-28!GO:0006397;mRNA processing;9.11218555926475e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.41178948351363e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.00316133200961e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.53492941294821e-25!GO:0005740;mitochondrial envelope;3.94879223874977e-24!GO:0051649;establishment of cellular localization;6.47039902771613e-24!GO:0051641;cellular localization;6.60519908821729e-24!GO:0031966;mitochondrial membrane;9.35895183067817e-23!GO:0005681;spliceosome;7.18217575093004e-22!GO:0005654;nucleoplasm;1.1319926139915e-21!GO:0044445;cytosolic part;1.32353038328376e-21!GO:0019866;organelle inner membrane;1.54332915148336e-21!GO:0005783;endoplasmic reticulum;1.5745241097857e-21!GO:0012505;endomembrane system;7.20443374880277e-21!GO:0006119;oxidative phosphorylation;2.17231190664817e-20!GO:0005743;mitochondrial inner membrane;3.2086241436851e-20!GO:0043285;biopolymer catabolic process;4.6674803029409e-20!GO:0006259;DNA metabolic process;1.51041728637004e-19!GO:0006457;protein folding;1.77626717334966e-19!GO:0048770;pigment granule;6.09060686932989e-19!GO:0042470;melanosome;6.09060686932989e-19!GO:0005794;Golgi apparatus;7.09127303368214e-19!GO:0030163;protein catabolic process;2.41740678006157e-18!GO:0015935;small ribosomal subunit;2.41740678006157e-18!GO:0007049;cell cycle;4.04698247347966e-18!GO:0044455;mitochondrial membrane part;5.06190441942002e-18!GO:0044451;nucleoplasm part;9.5609280738544e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;1.36920738095307e-17!GO:0022618;protein-RNA complex assembly;1.66925137680222e-17!GO:0019941;modification-dependent protein catabolic process;2.777671461958e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.777671461958e-17!GO:0016462;pyrophosphatase activity;3.16122060538549e-17!GO:0008134;transcription factor binding;3.18021487427549e-17!GO:0015934;large ribosomal subunit;3.20076298008336e-17!GO:0009057;macromolecule catabolic process;4.14282531392357e-17!GO:0044257;cellular protein catabolic process;4.18671547431369e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.43035605546115e-17!GO:0006511;ubiquitin-dependent protein catabolic process;5.98406242788499e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;6.35989061353622e-17!GO:0044432;endoplasmic reticulum part;7.17702768416957e-17!GO:0006512;ubiquitin cycle;8.08004214105044e-17!GO:0017111;nucleoside-triphosphatase activity;9.95184354837777e-17!GO:0044265;cellular macromolecule catabolic process;2.62249470185112e-16!GO:0000502;proteasome complex (sensu Eukaryota);3.58401926496347e-16!GO:0012501;programmed cell death;2.13439476713136e-15!GO:0048193;Golgi vesicle transport;4.28943617799898e-15!GO:0006915;apoptosis;5.08708500545139e-15!GO:0005746;mitochondrial respiratory chain;5.55694840665578e-15!GO:0016192;vesicle-mediated transport;5.69149536756173e-15!GO:0000166;nucleotide binding;6.2405221513501e-15!GO:0016874;ligase activity;6.55393388829381e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.78037884816216e-15!GO:0006605;protein targeting;1.06600417783307e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.20386352686448e-14!GO:0043412;biopolymer modification;3.23835251526504e-14!GO:0008219;cell death;1.06230987248843e-13!GO:0016265;death;1.06230987248843e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.25335082780936e-13!GO:0003954;NADH dehydrogenase activity;1.25335082780936e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.25335082780936e-13!GO:0051082;unfolded protein binding;1.86712057485975e-13!GO:0008135;translation factor activity, nucleic acid binding;2.41148110952321e-13!GO:0006464;protein modification process;2.54073990934034e-13!GO:0005730;nucleolus;3.02810181241626e-13!GO:0003676;nucleic acid binding;3.80916861921282e-13!GO:0022402;cell cycle process;8.7793716325925e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.61833178746711e-12!GO:0044248;cellular catabolic process;2.21481902835681e-12!GO:0005793;ER-Golgi intermediate compartment;4.03351996141492e-12!GO:0005761;mitochondrial ribosome;5.30331848336085e-12!GO:0000313;organellar ribosome;5.30331848336085e-12!GO:0031980;mitochondrial lumen;5.30331848336085e-12!GO:0005759;mitochondrial matrix;5.30331848336085e-12!GO:0048523;negative regulation of cellular process;5.94599730791213e-12!GO:0030964;NADH dehydrogenase complex (quinone);8.45994785840224e-12!GO:0045271;respiratory chain complex I;8.45994785840224e-12!GO:0005747;mitochondrial respiratory chain complex I;8.45994785840224e-12!GO:0042775;organelle ATP synthesis coupled electron transport;9.391824218402e-12!GO:0042773;ATP synthesis coupled electron transport;9.391824218402e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.27491706672774e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.27687935655749e-11!GO:0006413;translational initiation;1.42921177844703e-11!GO:0008565;protein transporter activity;2.06281290616582e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.51809016699546e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.79147483886266e-11!GO:0000375;RNA splicing, via transesterification reactions;2.79147483886266e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.79147483886266e-11!GO:0003743;translation initiation factor activity;2.8806918235079e-11!GO:0032553;ribonucleotide binding;2.94218267758367e-11!GO:0032555;purine ribonucleotide binding;2.94218267758367e-11!GO:0005789;endoplasmic reticulum membrane;3.92274423269789e-11!GO:0016070;RNA metabolic process;3.97533052816397e-11!GO:0006461;protein complex assembly;5.36377137713725e-11!GO:0043687;post-translational protein modification;5.58665772015221e-11!GO:0003712;transcription cofactor activity;6.71181313518686e-11!GO:0051186;cofactor metabolic process;1.12514713158961e-10!GO:0000278;mitotic cell cycle;1.92333160374862e-10!GO:0050794;regulation of cellular process;2.200794928473e-10!GO:0017076;purine nucleotide binding;2.67163397293769e-10!GO:0016604;nuclear body;2.79298818262778e-10!GO:0008639;small protein conjugating enzyme activity;3.41470209159776e-10!GO:0019787;small conjugating protein ligase activity;3.98976857870096e-10!GO:0042981;regulation of apoptosis;4.82147944552055e-10!GO:0043067;regulation of programmed cell death;5.04054907406811e-10!GO:0006446;regulation of translational initiation;5.04741846358437e-10!GO:0009055;electron carrier activity;5.12232226995426e-10!GO:0048519;negative regulation of biological process;5.88068746530241e-10!GO:0004842;ubiquitin-protein ligase activity;6.1479229402659e-10!GO:0000074;regulation of progression through cell cycle;6.46749856867071e-10!GO:0051726;regulation of cell cycle;7.3172092672494e-10!GO:0006974;response to DNA damage stimulus;9.16165423201477e-10!GO:0006913;nucleocytoplasmic transport;1.26424604707362e-09!GO:0005635;nuclear envelope;1.73215091410468e-09!GO:0043069;negative regulation of programmed cell death;1.82530173065073e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.86980489154314e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.86980489154314e-09!GO:0006916;anti-apoptosis;2.39490637021944e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;2.54604735920449e-09!GO:0051169;nuclear transport;2.71676440526066e-09!GO:0003924;GTPase activity;3.07071088361751e-09!GO:0043066;negative regulation of apoptosis;3.64424900605318e-09!GO:0009259;ribonucleotide metabolic process;4.86601820013103e-09!GO:0006366;transcription from RNA polymerase II promoter;5.03743785338436e-09!GO:0051276;chromosome organization and biogenesis;5.21372211329745e-09!GO:0031965;nuclear membrane;5.65647201860109e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.65647201860109e-09!GO:0042254;ribosome biogenesis and assembly;7.61557062724782e-09!GO:0006323;DNA packaging;8.2727849208749e-09!GO:0016607;nuclear speck;9.06072798711786e-09!GO:0005694;chromosome;9.15884673435171e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.54911825689739e-09!GO:0006888;ER to Golgi vesicle-mediated transport;1.00488500356064e-08!GO:0005788;endoplasmic reticulum lumen;1.09340098515666e-08!GO:0044431;Golgi apparatus part;1.3228912112685e-08!GO:0006732;coenzyme metabolic process;1.34661611036194e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.42148874850342e-08!GO:0051246;regulation of protein metabolic process;1.45350679940779e-08!GO:0016881;acid-amino acid ligase activity;1.93634210857931e-08!GO:0009150;purine ribonucleotide metabolic process;1.98361368379351e-08!GO:0006163;purine nucleotide metabolic process;2.14244831751623e-08!GO:0009056;catabolic process;2.23182803213133e-08!GO:0044427;chromosomal part;2.4241856992352e-08!GO:0044453;nuclear membrane part;2.75355772239441e-08!GO:0030120;vesicle coat;3.69604937356292e-08!GO:0030662;coated vesicle membrane;3.69604937356292e-08!GO:0009260;ribonucleotide biosynthetic process;3.92737342190291e-08!GO:0048475;coated membrane;3.95620328461848e-08!GO:0030117;membrane coat;3.95620328461848e-08!GO:0009199;ribonucleoside triphosphate metabolic process;4.02313902442401e-08!GO:0005524;ATP binding;4.71008749507615e-08!GO:0009141;nucleoside triphosphate metabolic process;5.09877259595725e-08!GO:0009152;purine ribonucleotide biosynthetic process;5.09877259595725e-08!GO:0065004;protein-DNA complex assembly;5.3259522401727e-08!GO:0015986;ATP synthesis coupled proton transport;5.41422005576006e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.41422005576006e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.43804606177025e-08!GO:0005773;vacuole;5.47086997202775e-08!GO:0005768;endosome;5.53225637864194e-08!GO:0006164;purine nucleotide biosynthetic process;5.74211720508791e-08!GO:0031252;leading edge;7.20005048186985e-08!GO:0050789;regulation of biological process;7.57691547725102e-08!GO:0006333;chromatin assembly or disassembly;7.57691547725102e-08!GO:0009719;response to endogenous stimulus;8.85477568940482e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.34148210920628e-08!GO:0009144;purine nucleoside triphosphate metabolic process;9.34148210920628e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.14048466887508e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.14048466887508e-07!GO:0031988;membrane-bound vesicle;1.17912473876285e-07!GO:0032559;adenyl ribonucleotide binding;1.19389641380855e-07!GO:0006281;DNA repair;1.42596714034146e-07!GO:0000785;chromatin;1.59758285393668e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.65010797448254e-07!GO:0017038;protein import;1.91529288245827e-07!GO:0051301;cell division;2.00543871424161e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.77022913768648e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.77022913768648e-07!GO:0042623;ATPase activity, coupled;2.87312465399228e-07!GO:0032446;protein modification by small protein conjugation;3.21271318421248e-07!GO:0031982;vesicle;3.44327237547442e-07!GO:0022403;cell cycle phase;3.8011697035559e-07!GO:0007243;protein kinase cascade;4.21314844290832e-07!GO:0004386;helicase activity;4.28993435030512e-07!GO:0000323;lytic vacuole;4.71020895965202e-07!GO:0005764;lysosome;4.71020895965202e-07!GO:0005525;GTP binding;5.01792608585976e-07!GO:0016567;protein ubiquitination;5.08076307119676e-07!GO:0016887;ATPase activity;5.68575686587388e-07!GO:0046034;ATP metabolic process;5.81100766002478e-07!GO:0031410;cytoplasmic vesicle;5.91982728719959e-07!GO:0065002;intracellular protein transport across a membrane;6.19554632192007e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.34694041263036e-07!GO:0019829;cation-transporting ATPase activity;7.85568005754578e-07!GO:0005643;nuclear pore;9.00380430911942e-07!GO:0030554;adenyl nucleotide binding;9.64755362416415e-07!GO:0031324;negative regulation of cellular metabolic process;1.01411641976085e-06!GO:0009060;aerobic respiration;1.43428289960937e-06!GO:0006754;ATP biosynthetic process;1.46627864456092e-06!GO:0006753;nucleoside phosphate metabolic process;1.46627864456092e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.61673946418899e-06!GO:0008026;ATP-dependent helicase activity;1.61906479481092e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.69259863702922e-06!GO:0016564;transcription repressor activity;1.69420128609466e-06!GO:0048522;positive regulation of cellular process;1.76852025846169e-06!GO:0000087;M phase of mitotic cell cycle;1.83145984000207e-06!GO:0000139;Golgi membrane;1.87507041533356e-06!GO:0007067;mitosis;2.12146694447435e-06!GO:0016787;hydrolase activity;2.2291255209011e-06!GO:0030036;actin cytoskeleton organization and biogenesis;2.65609165059017e-06!GO:0006334;nucleosome assembly;2.74023847193076e-06!GO:0007264;small GTPase mediated signal transduction;2.90424642396906e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.2522206409601e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.32421658925456e-06!GO:0050657;nucleic acid transport;3.35232074679291e-06!GO:0051236;establishment of RNA localization;3.35232074679291e-06!GO:0050658;RNA transport;3.35232074679291e-06!GO:0006403;RNA localization;3.62596161437926e-06!GO:0007005;mitochondrion organization and biogenesis;3.66749188957244e-06!GO:0045786;negative regulation of progression through cell cycle;3.85754799742696e-06!GO:0006399;tRNA metabolic process;3.88307457939321e-06!GO:0004298;threonine endopeptidase activity;4.43395272563715e-06!GO:0006613;cotranslational protein targeting to membrane;4.80835780514851e-06!GO:0045333;cellular respiration;5.28390416211353e-06!GO:0006793;phosphorus metabolic process;5.38146599353372e-06!GO:0006796;phosphate metabolic process;5.38146599353372e-06!GO:0006260;DNA replication;5.69103420235725e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.89480195700552e-06!GO:0004812;aminoacyl-tRNA ligase activity;5.89480195700552e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.89480195700552e-06!GO:0019899;enzyme binding;6.29250454854247e-06!GO:0032561;guanyl ribonucleotide binding;6.36787556902428e-06!GO:0019001;guanyl nucleotide binding;6.36787556902428e-06!GO:0003713;transcription coactivator activity;6.36787556902428e-06!GO:0005770;late endosome;6.46452745089579e-06!GO:0008361;regulation of cell size;6.48339085112497e-06!GO:0005798;Golgi-associated vesicle;6.73061801175535e-06!GO:0003714;transcription corepressor activity;6.86752712056342e-06!GO:0051170;nuclear import;7.46725442406817e-06!GO:0043038;amino acid activation;7.84932628223232e-06!GO:0006418;tRNA aminoacylation for protein translation;7.84932628223232e-06!GO:0043039;tRNA aminoacylation;7.84932628223232e-06!GO:0031497;chromatin assembly;7.9340505416794e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.90189924181701e-06!GO:0016563;transcription activator activity;9.69981008856896e-06!GO:0000245;spliceosome assembly;9.89551102218145e-06!GO:0016049;cell growth;1.00352429956605e-05!GO:0007010;cytoskeleton organization and biogenesis;1.09176019561358e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.27588561548888e-05!GO:0009892;negative regulation of metabolic process;1.31925098298845e-05!GO:0030029;actin filament-based process;1.32928503491744e-05!GO:0016853;isomerase activity;1.40840778634226e-05!GO:0006364;rRNA processing;1.46335652050414e-05!GO:0045259;proton-transporting ATP synthase complex;1.55400628297292e-05!GO:0006099;tricarboxylic acid cycle;1.67381409117362e-05!GO:0046356;acetyl-CoA catabolic process;1.67381409117362e-05!GO:0046930;pore complex;1.76632322920769e-05!GO:0006606;protein import into nucleus;1.76632322920769e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.85056570174539e-05!GO:0009117;nucleotide metabolic process;1.88671761093879e-05!GO:0006752;group transfer coenzyme metabolic process;1.99136360796868e-05!GO:0001558;regulation of cell growth;2.03897496304543e-05!GO:0030867;rough endoplasmic reticulum membrane;2.21069596661138e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.39801139386769e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.5675377013646e-05!GO:0000151;ubiquitin ligase complex;2.70964181375e-05!GO:0003697;single-stranded DNA binding;2.81473749346873e-05!GO:0005667;transcription factor complex;2.93945011232252e-05!GO:0016072;rRNA metabolic process;2.94082956457093e-05!GO:0016859;cis-trans isomerase activity;3.14554174296064e-05!GO:0043623;cellular protein complex assembly;3.20415630893581e-05!GO:0003724;RNA helicase activity;3.31926172982044e-05!GO:0042802;identical protein binding;3.4584931173512e-05!GO:0016310;phosphorylation;3.46335529879943e-05!GO:0008092;cytoskeletal protein binding;3.70474894022524e-05!GO:0045454;cell redox homeostasis;4.1859383408011e-05!GO:0030133;transport vesicle;4.40385138587429e-05!GO:0051789;response to protein stimulus;4.971268090048e-05!GO:0006986;response to unfolded protein;4.971268090048e-05!GO:0006084;acetyl-CoA metabolic process;5.14680112421355e-05!GO:0051187;cofactor catabolic process;5.55448423211787e-05!GO:0016568;chromatin modification;5.72750146119723e-05!GO:0009109;coenzyme catabolic process;6.40029351079765e-05!GO:0051329;interphase of mitotic cell cycle;6.44078390827835e-05!GO:0006612;protein targeting to membrane;6.55490137526135e-05!GO:0051325;interphase;7.12684762948003e-05!GO:0015630;microtubule cytoskeleton;7.40245822855351e-05!GO:0016481;negative regulation of transcription;7.43793784940781e-05!GO:0033116;ER-Golgi intermediate compartment membrane;7.49014405801814e-05!GO:0044440;endosomal part;7.82290043007497e-05!GO:0010008;endosome membrane;7.82290043007497e-05!GO:0051028;mRNA transport;8.37304938731011e-05!GO:0043566;structure-specific DNA binding;8.6240555449159e-05!GO:0051188;cofactor biosynthetic process;9.5161742495315e-05!GO:0048468;cell development;9.67165689111474e-05!GO:0031968;organelle outer membrane;0.000123169961107322!GO:0048518;positive regulation of biological process;0.000125023772653783!GO:0005762;mitochondrial large ribosomal subunit;0.000132006967178618!GO:0000315;organellar large ribosomal subunit;0.000132006967178618!GO:0009967;positive regulation of signal transduction;0.000138712537173953!GO:0000279;M phase;0.000147932397746264!GO:0005769;early endosome;0.000147932397746264!GO:0005791;rough endoplasmic reticulum;0.000164127570920403!GO:0005048;signal sequence binding;0.000169369361837049!GO:0065007;biological regulation;0.000193321830614809!GO:0005905;coated pit;0.000193321830614809!GO:0016044;membrane organization and biogenesis;0.00019976427059607!GO:0019867;outer membrane;0.000222681146531505!GO:0051427;hormone receptor binding;0.000236189878779192!GO:0005741;mitochondrial outer membrane;0.000240351178719157!GO:0065009;regulation of a molecular function;0.000246216340274815!GO:0008250;oligosaccharyl transferase complex;0.000247178924476356!GO:0008654;phospholipid biosynthetic process;0.000251331967245097!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000264851845826606!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000266754843853365!GO:0005885;Arp2/3 protein complex;0.00028250639610392!GO:0004576;oligosaccharyl transferase activity;0.000304944574161426!GO:0043021;ribonucleoprotein binding;0.000325623398399955!GO:0001726;ruffle;0.000352203061180843!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000362602675383846!GO:0008186;RNA-dependent ATPase activity;0.00039837612568096!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000400168765623033!GO:0019843;rRNA binding;0.000440747702831762!GO:0035257;nuclear hormone receptor binding;0.000451305453736477!GO:0008047;enzyme activator activity;0.000493726834592826!GO:0006891;intra-Golgi vesicle-mediated transport;0.000509726516172098!GO:0030027;lamellipodium;0.000525859657912159!GO:0048471;perinuclear region of cytoplasm;0.000613718100656599!GO:0016779;nucleotidyltransferase activity;0.000625075980422178!GO:0009108;coenzyme biosynthetic process;0.000640267784508278!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000642779247712273!GO:0007242;intracellular signaling cascade;0.000693534852607716!GO:0007265;Ras protein signal transduction;0.000719369454285406!GO:0030663;COPI coated vesicle membrane;0.00078634755252701!GO:0030126;COPI vesicle coat;0.00078634755252701!GO:0051920;peroxiredoxin activity;0.000804262891281871!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000823282680567675!GO:0018196;peptidyl-asparagine modification;0.000899645574153926!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000899645574153926!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000944510122068961!GO:0030118;clathrin coat;0.00105251410156313!GO:0016740;transferase activity;0.00107908378176282!GO:0005819;spindle;0.00111045269086916!GO:0004004;ATP-dependent RNA helicase activity;0.00111719052443442!GO:0005813;centrosome;0.00112104316087021!GO:0000314;organellar small ribosomal subunit;0.00116425140349281!GO:0005763;mitochondrial small ribosomal subunit;0.00116425140349281!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00119040187575289!GO:0045892;negative regulation of transcription, DNA-dependent;0.00121473052883592!GO:0009966;regulation of signal transduction;0.00123300349070157!GO:0016491;oxidoreductase activity;0.00125973721950051!GO:0033673;negative regulation of kinase activity;0.00143818400494164!GO:0006469;negative regulation of protein kinase activity;0.00143818400494164!GO:0008234;cysteine-type peptidase activity;0.00149950008538506!GO:0051252;regulation of RNA metabolic process;0.00152831497240273!GO:0048500;signal recognition particle;0.00153858472727022!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00165042281928999!GO:0030137;COPI-coated vesicle;0.00170777062624366!GO:0031072;heat shock protein binding;0.00178914565140446!GO:0007050;cell cycle arrest;0.00179833834905686!GO:0016363;nuclear matrix;0.00191118313753632!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00191118313753632!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00191118313753632!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00191118313753632!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00193551900858758!GO:0000786;nucleosome;0.00196951457634637!GO:0016197;endosome transport;0.00203127189991971!GO:0045045;secretory pathway;0.00203430568455702!GO:0030132;clathrin coat of coated pit;0.00212782434776829!GO:0051348;negative regulation of transferase activity;0.00227350938282869!GO:0051168;nuclear export;0.00228793839350119!GO:0043065;positive regulation of apoptosis;0.00240498468118106!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00245176078937006!GO:0003899;DNA-directed RNA polymerase activity;0.0026245576721093!GO:0030658;transport vesicle membrane;0.00262664446307868!GO:0005815;microtubule organizing center;0.00271374061356861!GO:0008632;apoptotic program;0.00281433359134042!GO:0030521;androgen receptor signaling pathway;0.00288842644604957!GO:0043068;positive regulation of programmed cell death;0.00292777060956953!GO:0005083;small GTPase regulator activity;0.00297012180312423!GO:0030127;COPII vesicle coat;0.00321503321760042!GO:0012507;ER to Golgi transport vesicle membrane;0.00321503321760042!GO:0030134;ER to Golgi transport vesicle;0.00329994224068702!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00330720713252431!GO:0045047;protein targeting to ER;0.00330720713252431!GO:0015980;energy derivation by oxidation of organic compounds;0.0033505771559764!GO:0040008;regulation of growth;0.00337268816094929!GO:0030659;cytoplasmic vesicle membrane;0.00340091404000771!GO:0019222;regulation of metabolic process;0.00341035528742169!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00344043465279445!GO:0006414;translational elongation;0.00362609156970571!GO:0007051;spindle organization and biogenesis;0.00396354630417529!GO:0048487;beta-tubulin binding;0.00400602108860157!GO:0008286;insulin receptor signaling pathway;0.00405810420664675!GO:0005096;GTPase activator activity;0.00412877586066889!GO:0006626;protein targeting to mitochondrion;0.00412877586066889!GO:0030119;AP-type membrane coat adaptor complex;0.00423183589388446!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00434535995178637!GO:0050790;regulation of catalytic activity;0.00445368964267569!GO:0035258;steroid hormone receptor binding;0.00471299429611236!GO:0003729;mRNA binding;0.00501280126616168!GO:0030176;integral to endoplasmic reticulum membrane;0.00531260839075232!GO:0008312;7S RNA binding;0.00557693964533816!GO:0046474;glycerophospholipid biosynthetic process;0.00574887585438552!GO:0043488;regulation of mRNA stability;0.00589202118188719!GO:0043487;regulation of RNA stability;0.00589202118188719!GO:0006383;transcription from RNA polymerase III promoter;0.00593516691087947!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00593516691087947!GO:0006402;mRNA catabolic process;0.00593516691087947!GO:0007040;lysosome organization and biogenesis;0.00600550498724643!GO:0043681;protein import into mitochondrion;0.00627994228062284!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0064399359188162!GO:0030131;clathrin adaptor complex;0.00698015303371471!GO:0008139;nuclear localization sequence binding;0.00711054710058072!GO:0017166;vinculin binding;0.00711054710058072!GO:0030660;Golgi-associated vesicle membrane;0.00752346889176946!GO:0005774;vacuolar membrane;0.00780846339115779!GO:0003690;double-stranded DNA binding;0.00806530270602046!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0084839523890189!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00851393794577278!GO:0006417;regulation of translation;0.00855702786124127!GO:0005684;U2-dependent spliceosome;0.00857487348315759!GO:0006950;response to stress;0.00862084272093482!GO:0051101;regulation of DNA binding;0.00862243093397732!GO:0006509;membrane protein ectodomain proteolysis;0.00870709712290918!GO:0033619;membrane protein proteolysis;0.00870709712290918!GO:0005912;adherens junction;0.00897573118954949!GO:0030041;actin filament polymerization;0.00903684760017774!GO:0045792;negative regulation of cell size;0.00903684760017774!GO:0044433;cytoplasmic vesicle part;0.00907062310527895!GO:0007033;vacuole organization and biogenesis;0.00943576086448157!GO:0006839;mitochondrial transport;0.0096190859511201!GO:0009165;nucleotide biosynthetic process;0.00965875210832135!GO:0000059;protein import into nucleus, docking;0.00973944384642494!GO:0005869;dynactin complex;0.00976307865152008!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00988430927097022!GO:0005099;Ras GTPase activator activity;0.00991832112699748!GO:0001725;stress fiber;0.00991832112699748!GO:0032432;actin filament bundle;0.00991832112699748!GO:0045893;positive regulation of transcription, DNA-dependent;0.00991832112699748!GO:0031902;late endosome membrane;0.00991832112699748!GO:0004197;cysteine-type endopeptidase activity;0.0100356450892047!GO:0051087;chaperone binding;0.0100795162401437!GO:0008180;signalosome;0.0101382072633682!GO:0030308;negative regulation of cell growth;0.0104477031783919!GO:0006650;glycerophospholipid metabolic process;0.0104477031783919!GO:0006979;response to oxidative stress;0.0107090227040504!GO:0000075;cell cycle checkpoint;0.0109494763037802!GO:0000082;G1/S transition of mitotic cell cycle;0.0112739429222895!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0112990617403611!GO:0051338;regulation of transferase activity;0.011321707102306!GO:0030833;regulation of actin filament polymerization;0.0114352998539866!GO:0046489;phosphoinositide biosynthetic process;0.0115366946097533!GO:0012506;vesicle membrane;0.0116989145316834!GO:0031418;L-ascorbic acid binding;0.0120519960875924!GO:0007006;mitochondrial membrane organization and biogenesis;0.0120519960875924!GO:0008243;plasminogen activator activity;0.0121808267635667!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0121991424590163!GO:0032940;secretion by cell;0.0121991424590163!GO:0045941;positive regulation of transcription;0.0123136373115481!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0123278933589186!GO:0030880;RNA polymerase complex;0.0124849313160453!GO:0019798;procollagen-proline dioxygenase activity;0.0127454779513247!GO:0008637;apoptotic mitochondrial changes;0.012824571322838!GO:0043284;biopolymer biosynthetic process;0.0128965473321494!GO:0005862;muscle thin filament tropomyosin;0.0132503627278514!GO:0006897;endocytosis;0.0132597894865972!GO:0010324;membrane invagination;0.0132597894865972!GO:0006091;generation of precursor metabolites and energy;0.0133768109778437!GO:0050681;androgen receptor binding;0.0134435081400347!GO:0008320;protein transmembrane transporter activity;0.0134589618317255!GO:0003779;actin binding;0.0137792158890279!GO:0015631;tubulin binding;0.0141157870472103!GO:0031529;ruffle organization and biogenesis;0.0143543889358549!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0148570806079249!GO:0015399;primary active transmembrane transporter activity;0.0148570806079249!GO:0031543;peptidyl-proline dioxygenase activity;0.0148704649563201!GO:0006352;transcription initiation;0.0150451007381443!GO:0030518;steroid hormone receptor signaling pathway;0.0151171129075665!GO:0045936;negative regulation of phosphate metabolic process;0.0152068191939682!GO:0000209;protein polyubiquitination;0.0153506103678779!GO:0016860;intramolecular oxidoreductase activity;0.0161895423964191!GO:0007266;Rho protein signal transduction;0.0162911099647122!GO:0030695;GTPase regulator activity;0.0163788220119138!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0165422523562521!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0165422523562521!GO:0006892;post-Golgi vesicle-mediated transport;0.0167663856121644!GO:0030125;clathrin vesicle coat;0.017248042108964!GO:0030665;clathrin coated vesicle membrane;0.017248042108964!GO:0044452;nucleolar part;0.0180580344596593!GO:0006401;RNA catabolic process;0.0181202712616567!GO:0050811;GABA receptor binding;0.0183448480158972!GO:0005832;chaperonin-containing T-complex;0.0183905569413209!GO:0044262;cellular carbohydrate metabolic process;0.0187661433278379!GO:0043022;ribosome binding;0.0188299286027852!GO:0043549;regulation of kinase activity;0.0188589433687681!GO:0030384;phosphoinositide metabolic process;0.0189959016808014!GO:0007160;cell-matrix adhesion;0.0193468204214285!GO:0016272;prefoldin complex;0.0200825460315524!GO:0006302;double-strand break repair;0.0202204203954134!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0204633264007997!GO:0051287;NAD binding;0.0207304944601239!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0208739610877819!GO:0006818;hydrogen transport;0.0208820361034781!GO:0008283;cell proliferation;0.0212209385259649!GO:0016251;general RNA polymerase II transcription factor activity;0.0222169056484345!GO:0003682;chromatin binding;0.0222231411276145!GO:0044437;vacuolar part;0.022248412430022!GO:0051235;maintenance of localization;0.0223230212739756!GO:0007030;Golgi organization and biogenesis;0.0223300715281745!GO:0007052;mitotic spindle organization and biogenesis;0.0223300715281745!GO:0051128;regulation of cellular component organization and biogenesis;0.0225790348078816!GO:0016584;nucleosome positioning;0.0225790348078816!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0225790348078816!GO:0015002;heme-copper terminal oxidase activity;0.0225790348078816!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0225790348078816!GO:0004129;cytochrome-c oxidase activity;0.0225790348078816!GO:0005765;lysosomal membrane;0.0226043659284451!GO:0030100;regulation of endocytosis;0.0226749499609193!GO:0007167;enzyme linked receptor protein signaling pathway;0.0228904656191775!GO:0031589;cell-substrate adhesion;0.0229025599599664!GO:0008094;DNA-dependent ATPase activity;0.0229463302214614!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0231194561738425!GO:0000428;DNA-directed RNA polymerase complex;0.0231194561738425!GO:0004177;aminopeptidase activity;0.023132939635831!GO:0046467;membrane lipid biosynthetic process;0.0233168529702075!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0233168529702075!GO:0005657;replication fork;0.0235839204652572!GO:0032507;maintenance of cellular protein localization;0.0244128865324331!GO:0000776;kinetochore;0.0244128865324331!GO:0001527;microfibril;0.0244633644689505!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0248173732520988!GO:0051336;regulation of hydrolase activity;0.0252511747720336!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0252785521410089!GO:0046519;sphingoid metabolic process;0.025296864476089!GO:0006607;NLS-bearing substrate import into nucleus;0.0255266495714703!GO:0005938;cell cortex;0.0257044106507128!GO:0006261;DNA-dependent DNA replication;0.0257526597835245!GO:0006740;NADPH regeneration;0.0260471856302198!GO:0006098;pentose-phosphate shunt;0.0260471856302198!GO:0006508;proteolysis;0.0262649783136488!GO:0005100;Rho GTPase activator activity;0.0263767935839167!GO:0015992;proton transport;0.0265047712531291!GO:0008147;structural constituent of bone;0.0265621276666382!GO:0006917;induction of apoptosis;0.0267341936201088!GO:0000049;tRNA binding;0.0274385955327809!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0278868650583446!GO:0045334;clathrin-coated endocytic vesicle;0.0278923078519212!GO:0031371;ubiquitin conjugating enzyme complex;0.0281264545848978!GO:0007021;tubulin folding;0.028412868904208!GO:0031625;ubiquitin protein ligase binding;0.0290306161994741!GO:0051098;regulation of binding;0.0290470906818228!GO:0006672;ceramide metabolic process;0.0292008245741713!GO:0006518;peptide metabolic process;0.0293122171132991!GO:0031124;mRNA 3'-end processing;0.0293312662260291!GO:0001836;release of cytochrome c from mitochondria;0.0293312662260291!GO:0007034;vacuolar transport;0.0300354791347909!GO:0008538;proteasome activator activity;0.0300946519969517!GO:0047485;protein N-terminus binding;0.0307099942443256!GO:0035035;histone acetyltransferase binding;0.0309997017847501!GO:0003756;protein disulfide isomerase activity;0.0312354860620331!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0312354860620331!GO:0003746;translation elongation factor activity;0.0318772610883135!GO:0012502;induction of programmed cell death;0.0320036850475693!GO:0000339;RNA cap binding;0.0322663386021204!GO:0051270;regulation of cell motility;0.032369562543806!GO:0051052;regulation of DNA metabolic process;0.0327630374478768!GO:0006611;protein export from nucleus;0.0330690274113469!GO:0043086;negative regulation of catalytic activity;0.0331797984226013!GO:0006376;mRNA splice site selection;0.033211856505635!GO:0000389;nuclear mRNA 3'-splice site recognition;0.033211856505635!GO:0003684;damaged DNA binding;0.033211856505635!GO:0005637;nuclear inner membrane;0.0335797554071198!GO:0045859;regulation of protein kinase activity;0.0348783449858289!GO:0008154;actin polymerization and/or depolymerization;0.0353735440659215!GO:0042326;negative regulation of phosphorylation;0.0353735440659215!GO:0003711;transcription elongation regulator activity;0.0353735440659215!GO:0019783;small conjugating protein-specific protease activity;0.0361056296968797!GO:0031326;regulation of cellular biosynthetic process;0.0364665279145923!GO:0022884;macromolecule transmembrane transporter activity;0.0369200116162787!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0369200116162787!GO:0006354;RNA elongation;0.0370511027101225!GO:0004674;protein serine/threonine kinase activity;0.0370511027101225!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0378093758003783!GO:0005784;translocon complex;0.0381053004646317!GO:0016791;phosphoric monoester hydrolase activity;0.0381181423861262!GO:0030522;intracellular receptor-mediated signaling pathway;0.0384209772163704!GO:0005586;collagen type III;0.0397019421144962!GO:0004843;ubiquitin-specific protease activity;0.0398233033982101!GO:0030032;lamellipodium biogenesis;0.040246770495621!GO:0031901;early endosome membrane;0.040246770495621!GO:0045185;maintenance of protein localization;0.0420801881271966!GO:0005758;mitochondrial intermembrane space;0.042498488227609!GO:0009889;regulation of biosynthetic process;0.0426286690883777!GO:0005874;microtubule;0.0430012885949539!GO:0022406;membrane docking;0.0435109223388916!GO:0048278;vesicle docking;0.0435109223388916!GO:0006487;protein amino acid N-linked glycosylation;0.0444845392863536!GO:0030911;TPR domain binding;0.0458317421731829!GO:0015036;disulfide oxidoreductase activity;0.0475740180376852!GO:0003678;DNA helicase activity;0.0478198627790877!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0488513420267152!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0488513420267152!GO:0045767;regulation of anti-apoptosis;0.0489437256296326!GO:0006984;ER-nuclear signaling pathway;0.0496546281473734!GO:0006405;RNA export from nucleus;0.0499351168993041 | |||
|sample_id=12239 | |sample_id=12239 | ||
|sample_note=Jan 20 librarian | |sample_note=Jan 20 librarian | ||
| Line 76: | Line 100: | ||
|sample_tissue=chorion | |sample_tissue=chorion | ||
|top_motifs=ZNF238:1.74203824186;GCM1,2:1.60332130732;ESR1:1.56410614938;TFAP2{A,C}:1.48647940395;XCPE1{core}:1.38854192133;ALX4:1.38668667195;TBP:1.38596817824;EN1,2:1.36934306647;TEAD1:1.35625731014;SRF:1.26619963768;TAL1_TCF{3,4,12}:1.19575080157;HOX{A6,A7,B6,B7}:1.19489193154;FOXO1,3,4:1.16313849786;SPZ1:1.15488323582;ZNF148:1.02719782414;TP53:0.978845546759;SMAD1..7,9:0.97618800146;GZF1:0.974165194747;TBX4,5:0.943460253568;MAZ:0.939728321677;UFEwm:0.859436703266;GTF2A1,2:0.79723603476;GLI1..3:0.723605951734;TFCP2:0.722464973609;SP1:0.721852080173;SNAI1..3:0.715602971986;GTF2I:0.690609521849;SOX17:0.647481990154;ATF6:0.615959207403;CDC5L:0.608228305124;IKZF1:0.604655706921;NKX3-2:0.597053299952;POU3F1..4:0.585194011145;TEF:0.570827910583;MAFB:0.556221752552;PATZ1:0.550456793818;NFATC1..3:0.549252341754;TFAP4:0.53867004482;EBF1:0.516213291419;HSF1,2:0.510199162775;HMX1:0.494317567278;TFAP2B:0.487662642226;MTE{core}:0.459909006229;PAX8:0.440551971287;HES1:0.438863443325;MYBL2:0.43196148959;HIF1A:0.413245442779;LHX3,4:0.385640345488;HLF:0.382739024288;KLF4:0.368464095472;FOXL1:0.365311939741;TLX1..3_NFIC{dimer}:0.359814120342;MZF1:0.348140461465;EVI1:0.346042086413;NKX2-2,8:0.315999179258;MED-1{core}:0.311977874339;TFDP1:0.30508074575;AR:0.296511665815;HOXA9_MEIS1:0.28226157653;FOXM1:0.278746925852;HIC1:0.269838855229;HAND1,2:0.266568985261;PPARG:0.263382097641;ZEB1:0.256343229953;RXR{A,B,G}:0.253760432945;NR1H4:0.251610260636;HMGA1,2:0.202951005304;IRF7:0.196294258987;ZNF423:0.1877151134;XBP1:0.187105093222;ZNF143:0.181368355837;HNF1A:0.178134886076;IRF1,2:0.170766731481;ZBTB6:0.151778878081;ELK1,4_GABP{A,B1}:0.14700125063;FOX{D1,D2}:0.137844512979;GATA4:0.131306525835;GFI1:0.114512745899;NANOG{mouse}:0.0981470533646;ZIC1..3:0.0960926953217;E2F1..5:0.0674970413867;FOX{I1,J2}:0.0565333527296;EGR1..3:0.0560424029606;NRF1:0.0404993869911;GFI1B:0.0309440298816;NKX3-1:0.0235719108327;FOS_FOS{B,L1}_JUN{B,D}:0.0187073505377;BACH2:0.0071177559967;ZNF384:-0.00308814574879;FOSL2:-0.0270600216094;NKX2-3_NKX2-5:-0.0322891207272;LEF1_TCF7_TCF7L1,2:-0.0345265086227;ADNP_IRX_SIX_ZHX:-0.0353748389965;PAX1,9:-0.0433705470725;HOX{A4,D4}:-0.0491510444633;SREBF1,2:-0.049175053073;MYFfamily:-0.0682123590458;HNF4A_NR2F1,2:-0.0713988650575;NHLH1,2:-0.0933375900531;ARID5B:-0.0991856879816;EP300:-0.102003046409;PAX5:-0.113661233282;SOX2:-0.114665593518;PRDM1:-0.118724650473;bHLH_family:-0.12306269242;STAT2,4,6:-0.133438716274;T:-0.140375335151;NKX2-1,4:-0.141012472285;NR3C1:-0.145014979413;POU2F1..3:-0.148745105751;NR6A1:-0.150186821023;NFE2L2:-0.178394066365;JUN:-0.187185417907;RXRA_VDR{dimer}:-0.18881829683;HBP1_HMGB_SSRP1_UBTF:-0.190059796;FOXN1:-0.193906949451;FOXA2:-0.206240961496;SOX5:-0.207105248633;MYB:-0.244650364607;GATA6:-0.248111333143;HOX{A5,B5}:-0.25645754447;MYOD1:-0.26038761818;NFKB1_REL_RELA:-0.262816275554;ZFP161:-0.26752729317;POU1F1:-0.278312229683;NFIL3:-0.280400569598;NFE2:-0.28205231063;STAT1,3:-0.293918125049;ATF2:-0.300191019232;REST:-0.310166253325;RUNX1..3:-0.311525971661;NFE2L1:-0.322389235069;ELF1,2,4:-0.32972537426;RREB1:-0.331950201796;MEF2{A,B,C,D}:-0.371949066675;SPIB:-0.377410080853;PAX2:-0.381085250318;CRX:-0.391011969657;TLX2:-0.398158425311;NFY{A,B,C}:-0.407672046334;SPI1:-0.424598614083;FOXD3:-0.436845762587;DBP:-0.444898071986;ETS1,2:-0.455449793334;TGIF1:-0.457596494081;AIRE:-0.47220960727;ATF4:-0.481578591951;MTF1:-0.48171634411;NFIX:-0.482405566111;YY1:-0.514993186307;CEBPA,B_DDIT3:-0.527883732981;TOPORS:-0.530336291971;OCT4_SOX2{dimer}:-0.540292983725;PAX4:-0.54145762175;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.558874390946;BPTF:-0.563493879601;ONECUT1,2:-0.578209802021;ESRRA:-0.58893590051;NR5A1,2:-0.590665024161;PAX6:-0.594658831881;RFX1:-0.62357280703;RORA:-0.656755131923;NKX6-1,2:-0.662712112961;DMAP1_NCOR{1,2}_SMARC:-0.664811720892;PITX1..3:-0.680547932552;PAX3,7:-0.697665248503;CUX2:-0.700939960382;RFX2..5_RFXANK_RFXAP:-0.703094892127;ATF5_CREB3:-0.719031793977;SOX{8,9,10}:-0.731438681125;LMO2:-0.770642812295;ALX1:-0.799094216226;PBX1:-0.843844520811;BREu{core}:-0.8493863887;PRRX1,2:-0.852032467197;CREB1:-0.858231628848;POU5F1:-0.926084836576;FOXP1:-0.931144019285;POU6F1:-0.955813378413;FOX{F1,F2,J1}:-0.956083851832;STAT5{A,B}:-0.97320348153;FOXP3:-1.02135952778;FOXQ1:-1.09668637513;CDX1,2,4:-1.14554585557;ZBTB16:-1.16653154837;AHR_ARNT_ARNT2:-1.2409278653;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.28673766321;PDX1:-1.318363448;VSX1,2:-1.42042753802;NANOG:-1.50665102612;RBPJ:-1.52759150215;IKZF2:-1.59268046318 | |top_motifs=ZNF238:1.74203824186;GCM1,2:1.60332130732;ESR1:1.56410614938;TFAP2{A,C}:1.48647940395;XCPE1{core}:1.38854192133;ALX4:1.38668667195;TBP:1.38596817824;EN1,2:1.36934306647;TEAD1:1.35625731014;SRF:1.26619963768;TAL1_TCF{3,4,12}:1.19575080157;HOX{A6,A7,B6,B7}:1.19489193154;FOXO1,3,4:1.16313849786;SPZ1:1.15488323582;ZNF148:1.02719782414;TP53:0.978845546759;SMAD1..7,9:0.97618800146;GZF1:0.974165194747;TBX4,5:0.943460253568;MAZ:0.939728321677;UFEwm:0.859436703266;GTF2A1,2:0.79723603476;GLI1..3:0.723605951734;TFCP2:0.722464973609;SP1:0.721852080173;SNAI1..3:0.715602971986;GTF2I:0.690609521849;SOX17:0.647481990154;ATF6:0.615959207403;CDC5L:0.608228305124;IKZF1:0.604655706921;NKX3-2:0.597053299952;POU3F1..4:0.585194011145;TEF:0.570827910583;MAFB:0.556221752552;PATZ1:0.550456793818;NFATC1..3:0.549252341754;TFAP4:0.53867004482;EBF1:0.516213291419;HSF1,2:0.510199162775;HMX1:0.494317567278;TFAP2B:0.487662642226;MTE{core}:0.459909006229;PAX8:0.440551971287;HES1:0.438863443325;MYBL2:0.43196148959;HIF1A:0.413245442779;LHX3,4:0.385640345488;HLF:0.382739024288;KLF4:0.368464095472;FOXL1:0.365311939741;TLX1..3_NFIC{dimer}:0.359814120342;MZF1:0.348140461465;EVI1:0.346042086413;NKX2-2,8:0.315999179258;MED-1{core}:0.311977874339;TFDP1:0.30508074575;AR:0.296511665815;HOXA9_MEIS1:0.28226157653;FOXM1:0.278746925852;HIC1:0.269838855229;HAND1,2:0.266568985261;PPARG:0.263382097641;ZEB1:0.256343229953;RXR{A,B,G}:0.253760432945;NR1H4:0.251610260636;HMGA1,2:0.202951005304;IRF7:0.196294258987;ZNF423:0.1877151134;XBP1:0.187105093222;ZNF143:0.181368355837;HNF1A:0.178134886076;IRF1,2:0.170766731481;ZBTB6:0.151778878081;ELK1,4_GABP{A,B1}:0.14700125063;FOX{D1,D2}:0.137844512979;GATA4:0.131306525835;GFI1:0.114512745899;NANOG{mouse}:0.0981470533646;ZIC1..3:0.0960926953217;E2F1..5:0.0674970413867;FOX{I1,J2}:0.0565333527296;EGR1..3:0.0560424029606;NRF1:0.0404993869911;GFI1B:0.0309440298816;NKX3-1:0.0235719108327;FOS_FOS{B,L1}_JUN{B,D}:0.0187073505377;BACH2:0.0071177559967;ZNF384:-0.00308814574879;FOSL2:-0.0270600216094;NKX2-3_NKX2-5:-0.0322891207272;LEF1_TCF7_TCF7L1,2:-0.0345265086227;ADNP_IRX_SIX_ZHX:-0.0353748389965;PAX1,9:-0.0433705470725;HOX{A4,D4}:-0.0491510444633;SREBF1,2:-0.049175053073;MYFfamily:-0.0682123590458;HNF4A_NR2F1,2:-0.0713988650575;NHLH1,2:-0.0933375900531;ARID5B:-0.0991856879816;EP300:-0.102003046409;PAX5:-0.113661233282;SOX2:-0.114665593518;PRDM1:-0.118724650473;bHLH_family:-0.12306269242;STAT2,4,6:-0.133438716274;T:-0.140375335151;NKX2-1,4:-0.141012472285;NR3C1:-0.145014979413;POU2F1..3:-0.148745105751;NR6A1:-0.150186821023;NFE2L2:-0.178394066365;JUN:-0.187185417907;RXRA_VDR{dimer}:-0.18881829683;HBP1_HMGB_SSRP1_UBTF:-0.190059796;FOXN1:-0.193906949451;FOXA2:-0.206240961496;SOX5:-0.207105248633;MYB:-0.244650364607;GATA6:-0.248111333143;HOX{A5,B5}:-0.25645754447;MYOD1:-0.26038761818;NFKB1_REL_RELA:-0.262816275554;ZFP161:-0.26752729317;POU1F1:-0.278312229683;NFIL3:-0.280400569598;NFE2:-0.28205231063;STAT1,3:-0.293918125049;ATF2:-0.300191019232;REST:-0.310166253325;RUNX1..3:-0.311525971661;NFE2L1:-0.322389235069;ELF1,2,4:-0.32972537426;RREB1:-0.331950201796;MEF2{A,B,C,D}:-0.371949066675;SPIB:-0.377410080853;PAX2:-0.381085250318;CRX:-0.391011969657;TLX2:-0.398158425311;NFY{A,B,C}:-0.407672046334;SPI1:-0.424598614083;FOXD3:-0.436845762587;DBP:-0.444898071986;ETS1,2:-0.455449793334;TGIF1:-0.457596494081;AIRE:-0.47220960727;ATF4:-0.481578591951;MTF1:-0.48171634411;NFIX:-0.482405566111;YY1:-0.514993186307;CEBPA,B_DDIT3:-0.527883732981;TOPORS:-0.530336291971;OCT4_SOX2{dimer}:-0.540292983725;PAX4:-0.54145762175;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.558874390946;BPTF:-0.563493879601;ONECUT1,2:-0.578209802021;ESRRA:-0.58893590051;NR5A1,2:-0.590665024161;PAX6:-0.594658831881;RFX1:-0.62357280703;RORA:-0.656755131923;NKX6-1,2:-0.662712112961;DMAP1_NCOR{1,2}_SMARC:-0.664811720892;PITX1..3:-0.680547932552;PAX3,7:-0.697665248503;CUX2:-0.700939960382;RFX2..5_RFXANK_RFXAP:-0.703094892127;ATF5_CREB3:-0.719031793977;SOX{8,9,10}:-0.731438681125;LMO2:-0.770642812295;ALX1:-0.799094216226;PBX1:-0.843844520811;BREu{core}:-0.8493863887;PRRX1,2:-0.852032467197;CREB1:-0.858231628848;POU5F1:-0.926084836576;FOXP1:-0.931144019285;POU6F1:-0.955813378413;FOX{F1,F2,J1}:-0.956083851832;STAT5{A,B}:-0.97320348153;FOXP3:-1.02135952778;FOXQ1:-1.09668637513;CDX1,2,4:-1.14554585557;ZBTB16:-1.16653154837;AHR_ARNT_ARNT2:-1.2409278653;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.28673766321;PDX1:-1.318363448;VSX1,2:-1.42042753802;NANOG:-1.50665102612;RBPJ:-1.52759150215;IKZF2:-1.59268046318 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12239-129G7;search_select_hide=table117:FF:12239-129G7 | |||
}} | }} | ||
Latest revision as of 18:36, 4 June 2020
| Name: | chorionic membrane cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12506 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12506
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12506
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.136 |
| 10 | 10 | 0.124 |
| 100 | 100 | 0.151 |
| 101 | 101 | 0.206 |
| 102 | 102 | 0.632 |
| 103 | 103 | 0.934 |
| 104 | 104 | 0.758 |
| 105 | 105 | 0.397 |
| 106 | 106 | 0.684 |
| 107 | 107 | 0.0587 |
| 108 | 108 | 0.64 |
| 109 | 109 | 0.331 |
| 11 | 11 | 0.35 |
| 110 | 110 | 0.934 |
| 111 | 111 | 0.0157 |
| 112 | 112 | 0.567 |
| 113 | 113 | 0.762 |
| 114 | 114 | 0.283 |
| 115 | 115 | 0.249 |
| 116 | 116 | 0.767 |
| 117 | 117 | 0.757 |
| 118 | 118 | 0.646 |
| 119 | 119 | 0.287 |
| 12 | 12 | 0.744 |
| 120 | 120 | 0.294 |
| 121 | 121 | 0.739 |
| 122 | 122 | 0.401 |
| 123 | 123 | 1.49846e-4 |
| 124 | 124 | 0.0438 |
| 125 | 125 | 0.689 |
| 126 | 126 | 0.625 |
| 127 | 127 | 0.514 |
| 128 | 128 | 0.612 |
| 129 | 129 | 0.407 |
| 13 | 13 | 0.572 |
| 130 | 130 | 0.417 |
| 131 | 131 | 0.489 |
| 132 | 132 | 0.28 |
| 133 | 133 | 0.178 |
| 134 | 134 | 0.685 |
| 135 | 135 | 0.415 |
| 136 | 136 | 0.248 |
| 137 | 137 | 0.0592 |
| 138 | 138 | 0.516 |
| 139 | 139 | 0.0317 |
| 14 | 14 | 0.54 |
| 140 | 140 | 0.412 |
| 141 | 141 | 0.364 |
| 142 | 142 | 0.724 |
| 143 | 143 | 0.553 |
| 144 | 144 | 0.36 |
| 145 | 145 | 0.918 |
| 146 | 146 | 0.636 |
| 147 | 147 | 0.629 |
| 148 | 148 | 0.403 |
| 149 | 149 | 0.115 |
| 15 | 15 | 0.359 |
| 150 | 150 | 0.254 |
| 151 | 151 | 0.836 |
| 152 | 152 | 0.00254 |
| 153 | 153 | 0.699 |
| 154 | 154 | 0.559 |
| 155 | 155 | 0.299 |
| 156 | 156 | 0.519 |
| 157 | 157 | 0.407 |
| 158 | 158 | 0.327 |
| 159 | 159 | 0.766 |
| 16 | 16 | 0.127 |
| 160 | 160 | 0.534 |
| 161 | 161 | 0.251 |
| 162 | 162 | 0.401 |
| 163 | 163 | 0.803 |
| 164 | 164 | 0.566 |
| 165 | 165 | 0.368 |
| 166 | 166 | 0.534 |
| 167 | 167 | 0.26 |
| 168 | 168 | 0.371 |
| 169 | 169 | 0.275 |
| 17 | 17 | 0.718 |
| 18 | 18 | 0.737 |
| 19 | 19 | 0.16 |
| 2 | 2 | 0.0839 |
| 20 | 20 | 0.368 |
| 21 | 21 | 0.953 |
| 22 | 22 | 0.59 |
| 23 | 23 | 0.816 |
| 24 | 24 | 0.904 |
| 25 | 25 | 0.392 |
| 26 | 26 | 0.301 |
| 27 | 27 | 0.586 |
| 28 | 28 | 0.514 |
| 29 | 29 | 0.434 |
| 3 | 3 | 0.498 |
| 30 | 30 | 0.0436 |
| 31 | 31 | 0.76 |
| 32 | 32 | 8.94203e-7 |
| 33 | 33 | 0.626 |
| 34 | 34 | 0.275 |
| 35 | 35 | 0.225 |
| 36 | 36 | 0.0541 |
| 37 | 37 | 0.561 |
| 38 | 38 | 0.571 |
| 39 | 39 | 0.215 |
| 4 | 4 | 0.733 |
| 40 | 40 | 0.333 |
| 41 | 41 | 0.127 |
| 42 | 42 | 0.383 |
| 43 | 43 | 0.309 |
| 44 | 44 | 0.479 |
| 45 | 45 | 0.125 |
| 46 | 46 | 0.402 |
| 47 | 47 | 0.398 |
| 48 | 48 | 0.545 |
| 49 | 49 | 0.124 |
| 5 | 5 | 0.512 |
| 50 | 50 | 0.588 |
| 51 | 51 | 0.949 |
| 52 | 52 | 0.716 |
| 53 | 53 | 0.2 |
| 54 | 54 | 0.82 |
| 55 | 55 | 0.682 |
| 56 | 56 | 0.829 |
| 57 | 57 | 0.699 |
| 58 | 58 | 0.0806 |
| 59 | 59 | 0.25 |
| 6 | 6 | 0.271 |
| 60 | 60 | 0.659 |
| 61 | 61 | 0.883 |
| 62 | 62 | 0.126 |
| 63 | 63 | 0.664 |
| 64 | 64 | 0.422 |
| 65 | 65 | 0.963 |
| 66 | 66 | 0.518 |
| 67 | 67 | 0.732 |
| 68 | 68 | 0.332 |
| 69 | 69 | 0.43 |
| 7 | 7 | 0.503 |
| 70 | 70 | 0.281 |
| 71 | 71 | 0.0455 |
| 72 | 72 | 0.996 |
| 73 | 73 | 0.00408 |
| 74 | 74 | 0.203 |
| 75 | 75 | 0.653 |
| 76 | 76 | 0.365 |
| 77 | 77 | 0.0664 |
| 78 | 78 | 0.821 |
| 79 | 79 | 0.0797 |
| 8 | 8 | 0.636 |
| 80 | 80 | 0.529 |
| 81 | 81 | 0.151 |
| 82 | 82 | 0.752 |
| 83 | 83 | 0.38 |
| 84 | 84 | 0.11 |
| 85 | 85 | 0.969 |
| 86 | 86 | 0.876 |
| 87 | 87 | 0.103 |
| 88 | 88 | 0.941 |
| 89 | 89 | 0.696 |
| 9 | 9 | 0.863 |
| 90 | 90 | 0.418 |
| 91 | 91 | 0.512 |
| 92 | 92 | 0.312 |
| 93 | 93 | 0.659 |
| 94 | 94 | 0.42 |
| 95 | 95 | 0.175 |
| 96 | 96 | 0.179 |
| 97 | 97 | 0.467 |
| 98 | 98 | 0.394 |
| 99 | 99 | 0.0594 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12506
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000038 human chorionic membrane stem cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000349 (extraembryonic cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002541 (chorionic membrane mesenchymal stem cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0005631 (extraembryonic membrane)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000476 (acellular anatomical structure)
0000478 (extraembryonic structure)
0000158 (membranous layer)
0003124 (chorion)
0000920 (egg chorion)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000038 (human chorionic membrane stem cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
