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FFCP PHASE1:Mm9::chr10:106708924..106708944,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108030
|EntrezGene=108030
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q3TUM0
|UniProt=Q3TUM0
|association_with_transcript=25bp_to_ENSMUST00000105280_5end
|association_with_transcript=25bp_to_ENSMUST00000105280_5end
|cluster_id=chr10:106708924..106708944,+
|description=CAGE_peak_1_at_Lin7a_5end
|description=CAGE_peak_1_at_Lin7a_5end
|id=chr10:106708924..106708944,+
|id=chr10:106708924..106708944,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.72e-18!71;UBERON:0003075!1.72e-18!71;UBERON:0007284!1.72e-18!71;UBERON:0004121!5.77e-17!102;UBERON:0000924!5.77e-17!102;UBERON:0006601!5.77e-17!102;UBERON:0000033!1.68e-16!63;UBERON:0001017!3.01e-15!73;UBERON:0005743!3.01e-15!73;UBERON:0000073!1.73e-14!75;UBERON:0001016!1.73e-14!75;UBERON:0003056!6.67e-14!49;UBERON:0001049!3.49e-13!52;UBERON:0005068!3.49e-13!52;UBERON:0006241!3.49e-13!52;UBERON:0007135!3.49e-13!52;UBERON:0000955!1.75e-12!50;UBERON:0006238!1.75e-12!50;UBERON:0002616!7.12e-12!49;UBERON:0000025!1.89e-11!114;UBERON:0004111!5.47e-11!122;UBERON:0002020!4.42e-10!34;UBERON:0000468!6.66e-10!333;UBERON:0003080!8.63e-10!40;UBERON:0002780!2.67e-09!39;UBERON:0001890!2.67e-09!39;UBERON:0006240!2.67e-09!39;UBERON:0002791!4.65e-08!29;UBERON:0003528!4.65e-08!29;UBERON:0001893!4.65e-08!29;UBERON:0002021!9.36e-08!10;UBERON:0000411!9.36e-08!10;UBERON:0001950!9.36e-08!10;UBERON:0000922!3.27e-07!328;UBERON:0000153!6.74e-07!94;UBERON:0000479!7.50e-07!349;UBERON:0007811!9.53e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.89e-18,64;UBERON:0003075,1.89e-18,64;UBERON:0007284,1.89e-18,64;UBERON:0010371,1.68e-16,73;UBERON:0004121,8.01e-16,95;UBERON:0000924,8.01e-16,95;UBERON:0006601,8.01e-16,95;UBERON:0010314,3.50e-15,92;UBERON:0001017,2.28e-14,73;UBERON:0000073,1.59e-13,54;UBERON:0001016,1.83e-13,75;UBERON:0003056,1.83e-13,49;UBERON:0001049,1.06e-12,52;UBERON:0005068,1.06e-12,52;UBERON:0006241,1.06e-12,52;UBERON:0007135,1.06e-12,52;UBERON:0000025,5.50e-11,114;UBERON:0000955,1.00e-10,47;UBERON:0006238,1.00e-10,47;UBERON:0004111,2.21e-10,122;UBERON:0002616,3.91e-10,46;UBERON:0002020,1.48e-09,34;UBERON:0003080,2.54e-09,40;UBERON:0002780,7.88e-09,39;UBERON:0001890,7.88e-09,39;UBERON:0006240,7.88e-09,39;UBERON:0002021,6.26e-08,10;UBERON:0000411,6.26e-08,10;UBERON:0001950,6.26e-08,10;UBERON:0003528,1.59e-07,29;UBERON:0002791,1.59e-07,29;UBERON:0001893,1.59e-07,29
|phase1_expression=3.68342348341026,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1787446105161,0,0,0,0.22940928106717,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0.777719596297134,0.419959264876088,0,0,0,0,0.257259436035947,1.43266719969378,0,9.91350658212029,6.87688273053643,5.70448263155561,0,0,0,0,0,0.898800331555214,0.768436610643109,1.34796496001021,0.945041568321835,1.68259969081106,11.1403883917483,11.7060326704355,2.57230678351403,2.77951865952885,3.67687514644008,16.5173821499083,18.7700386985226,17.3575382579555,6.72620067423989,11.161492519494,15.106487746146,11.725685958058,15.757353080887,20.933359945423,19.1508580557884,27.4777343942269,24.0455285114638,0.605809546665472,1.5870027622425,0,34.4169550792555,10.879541339324,33.4615978815447,55.2309954830519,77.0606245807417,14.0444420131752,0,0,0,4.22530259330042,0,0,0,0,0,0,10.9616524530298,3.88406825470758,5.34391700633369,3.81667718885499,4.56698217468212,2.53677046981664,3.76806601381556,6.23220147819235,2.76466500925286,0.494389935468748,5.49477556295664,0,5.82360659810673,3.97514733228708,4.363877278217,0,252.962608617977,225.783549944905,1.27728527604296,0,0,0,34.7514283419189,42.0900554593136,20.9842768028484,59.100268865374,56.0016851553424,36.362907797923,37.6399730317198,4.48093200941392,4.47865094196335,8.59257378674494,16.6249066150314,11.0602376518298,18.6220704591113,22.8678904852794,18.9888070473001,19.6625482547337,24.4697205744063,19.3962569838639,90.0287730171775,0.431135985865684,5.10586416453112,3.87092473160687,4.16471891612392,4.17070873838397,5.57203466435466,4.11564272815887,1.39323986772945,0,0,0,2.27838349789052,3.04883877975425,2.16074473753218,3.31442629819294,2.16440654922144,2.46827380619805,3.0229412817553,2.68273401399619,4.08678698285093,1.6455984991348,3.77585167381919,4.13450928683864,4.5321996101853,4.39100230582101,4.83143107537338,34.0669716673886,11.3195073617213,0,0.793351699990633,2.98603550749328,7.43157349953403,5.67016829817211,4.43703754171354,4.00280478920767,3.61428689613862,1.89811624617805,1.4822905925161,2.01068167040216,1.98956472041151,2.72949721966768,0.898819408654221,2.16138049874694,1.7922714592893,0.189667900953082,2.17072173958485,0,2.44381593414377,1.55161989734101,2.31448205638051,2.02356918797623,4.42830443938806,4.55296310739987,4.07210640941942,66.9982937216956,1.00107063429656,3.14494392181125,2.69834534861824,4.05720242777006,4.58236603529592,4.32863948028414,4.02774592431135,2.10775794807546,15.3754391385326,18.6898668485561,20.8398930694362,41.188972851122,65.4179293883019,54.5368137106613,37.6305946663426,0,7.39016505904891,18.0891123850649,8.65699937453459,3.98973422090454,1.17254380209271,0.714130922658041,1.17080188714679,0.157635144106191,1.10732344824387,0.637819074629948,0,0.518054945597687,0.144649058581512,0,0,0,2.75936746304733,29.2202073777781,31.7643670664871,0,5.55436039849621,14.1978698737316,13.2749173060857,18.0955654095551,2.62865677747807,3.56477878531831,2.54768877709949,11.7395103485719,13.151513606009,12.2539211163422,80.9729717382954,2.12910127812403,0.712262414669021,2.76907830901079,6.10389454998381,1.32745138339963,0.971122544619926,0.302323556964751,1.88605079755898,2.65771703592696,3.99665692327106,6.20227903603731,2.90826983582004,1.42598951353889,1.8962205476149,5.27093042874994,0,14.6389030474129,4.86164953884538,1.03486947026204,3.42939256050548,10.2857335512519,4.99432689285798,9.05019613311665,2.74018454203139,0.23467170806371,0.42366414172764,0.882113592219848,2.80306630000516,7.26589920131575,2.5934557719107,2.26807453605959,1.14898629821543,2.33184669303881,22.4364615432717,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,3.95419991976419,3.25311147402958,3.88819226958485,4.80903080833278,3.05707589244649,2.29269388854195,4.05001933054146,3.14107130380836,2.07383957266869,1.86401793926078,1.12738587736838,0.299033092087958,0.496375471371293,2.91676782516071,6.07051170345336,10.4752797804282,11.1489376713466,2.73429208172295,0.524296722128554,3.14059357073808,2.88030006257865,0,1.41907650703115,1.43795340030758,2.46849563657811,0.716106782669926,3.3775830312815,0.841368146639782,0.886137163047463,0.605798699688886,1.06689529317,0.504130925684203,0.682205165178267,0.962118416403295,0.818138315270983,7.02864189207155,0.221985953374065,0,0,3.28422309854724,3.00291960721891,3.11357761254351,1.50057865355346,1.50471631210609,72.2882358549845,78.7156154427272,60.726924424576,54.6493119852927,50.6961064630275,61.9422995859554,62.1020700213261,55.3895079965791,67.5182189386465,51.2582708634302,7.36890167847654,12.768795948833,12.2928196142977,6.32077464377565,5.65955539095552,7.16989682955055,7.55638874525492,7.2112270033613,9.30665707816264,6.06473308233114,8.36481689637791,10.3744487762342,7.67860361253036,8.1311943554184,7.98353018483024,6.66811167796303,6.95305955669133,6.17309505483856,9.06588981767275,9.27353196846703,12.6861623382604,7.63145966485151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|phase1_expression=3.68342348341026,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1787446105161,0,0,0,0.22940928106717,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0.777719596297134,0.419959264876088,0,0,0,0,0.257259436035947,1.43266719969378,0,9.91350658212029,6.87688273053643,5.70448263155561,0,0,0,0,0,0.898800331555214,0.768436610643109,1.34796496001021,0.945041568321835,1.68259969081106,11.1403883917483,11.7060326704355,2.57230678351403,2.77951865952885,3.67687514644008,16.5173821499083,18.7700386985226,17.3575382579555,6.72620067423989,11.161492519494,15.106487746146,11.725685958058,15.757353080887,20.933359945423,19.1508580557884,27.4777343942269,24.0455285114638,0.605809546665472,1.5870027622425,0,34.4169550792555,10.879541339324,33.4615978815447,55.2309954830519,77.0606245807417,14.0444420131752,0,0,0,4.22530259330042,0,0,0,0,0,0,10.9616524530298,3.88406825470758,5.34391700633369,3.81667718885499,4.56698217468212,2.53677046981664,3.76806601381556,6.23220147819235,2.76466500925286,0.494389935468748,5.49477556295664,0,5.82360659810673,3.97514733228708,4.363877278217,0,252.962608617977,225.783549944905,1.27728527604296,0,0,0,34.7514283419189,42.0900554593136,20.9842768028484,59.100268865374,56.0016851553424,36.362907797923,37.6399730317198,4.48093200941392,4.47865094196335,8.59257378674494,16.6249066150314,11.0602376518298,18.6220704591113,22.8678904852794,18.9888070473001,19.6625482547337,24.4697205744063,19.3962569838639,90.0287730171775,0.431135985865684,5.10586416453112,3.87092473160687,4.16471891612392,4.17070873838397,5.57203466435466,4.11564272815887,1.39323986772945,0,0,0,2.27838349789052,3.04883877975425,2.16074473753218,3.31442629819294,2.16440654922144,2.46827380619805,3.0229412817553,2.68273401399619,4.08678698285093,1.6455984991348,3.77585167381919,4.13450928683864,4.5321996101853,4.39100230582101,4.83143107537338,34.0669716673886,11.3195073617213,0,0.793351699990633,2.98603550749328,7.43157349953403,5.67016829817211,4.43703754171354,4.00280478920767,3.61428689613862,1.89811624617805,1.4822905925161,2.01068167040216,1.98956472041151,2.72949721966768,0.898819408654221,2.16138049874694,1.7922714592893,0.189667900953082,2.17072173958485,0,2.44381593414377,1.55161989734101,2.31448205638051,2.02356918797623,4.42830443938806,4.55296310739987,4.07210640941942,66.9982937216956,1.00107063429656,3.14494392181125,2.69834534861824,4.05720242777006,4.58236603529592,4.32863948028414,4.02774592431135,2.10775794807546,15.3754391385326,18.6898668485561,20.8398930694362,41.188972851122,65.4179293883019,54.5368137106613,37.6305946663426,0,7.39016505904891,18.0891123850649,8.65699937453459,3.98973422090454,1.17254380209271,0.714130922658041,1.17080188714679,0.157635144106191,1.10732344824387,0.637819074629948,0,0.518054945597687,0.144649058581512,0,0,0,2.75936746304733,29.2202073777781,31.7643670664871,0,5.55436039849621,14.1978698737316,13.2749173060857,18.0955654095551,2.62865677747807,3.56477878531831,2.54768877709949,11.7395103485719,13.151513606009,12.2539211163422,80.9729717382954,2.12910127812403,0.712262414669021,2.76907830901079,6.10389454998381,1.32745138339963,0.971122544619926,0.302323556964751,1.88605079755898,2.65771703592696,3.99665692327106,6.20227903603731,2.90826983582004,1.42598951353889,1.8962205476149,5.27093042874994,0,14.6389030474129,4.86164953884538,1.03486947026204,3.42939256050548,10.2857335512519,4.99432689285798,9.05019613311665,2.74018454203139,0.23467170806371,0.42366414172764,0.882113592219848,2.80306630000516,7.26589920131575,2.5934557719107,2.26807453605959,1.14898629821543,2.33184669303881,22.4364615432717,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,3.95419991976419,3.25311147402958,3.88819226958485,4.80903080833278,3.05707589244649,2.29269388854195,4.05001933054146,3.14107130380836,2.07383957266869,1.86401793926078,1.12738587736838,0.299033092087958,0.496375471371293,2.91676782516071,6.07051170345336,10.4752797804282,11.1489376713466,2.73429208172295,0.524296722128554,3.14059357073808,2.88030006257865,0,1.41907650703115,1.43795340030758,2.46849563657811,0.716106782669926,3.3775830312815,0.841368146639782,0.886137163047463,0.605798699688886,1.06689529317,0.504130925684203,0.682205165178267,0.962118416403295,0.818138315270983,7.02864189207155,0.221985953374065,0,0,3.28422309854724,3.00291960721891,3.11357761254351,1.50057865355346,1.50471631210609,72.2882358549845,78.7156154427272,60.726924424576,54.6493119852927,50.6961064630275,61.9422995859554,62.1020700213261,55.3895079965791,67.5182189386465,51.2582708634302,7.36890167847654,12.768795948833,12.2928196142977,6.32077464377565,5.65955539095552,7.16989682955055,7.55638874525492,7.2112270033613,9.30665707816264,6.06473308233114,8.36481689637791,10.3744487762342,7.67860361253036,8.1311943554184,7.98353018483024,6.66811167796303,6.95305955669133,6.17309505483856,9.06588981767275,9.27353196846703,12.6861623382604,7.63145966485151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|short_description=p1@Lin7a
|short_description=p1@Lin7a
}}
}}

Latest revision as of 13:52, 25 September 2015

Short description:p1@Lin7a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lin7a_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 25bp_to_ENSMUST00000105280_5end
EntrezGene:Lin7a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lin7a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.16
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F734.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C833.46
Mouse hepatocyte, donor6.CNhs13090.11822-124F455.23
Mouse hepatocyte, donor8.CNhs13091.11824-124F677.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.96
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D75.34
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2252.96
cerebellum, neonate N30.CNhs11135.1395-42I2225.78
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A434.75
corpus striatum, adult.CNhs10487.19-21D842.09
corpus striatum, neonate N00.CNhs11226.630-43F120.98
cortex, adult.CNhs10473.12-14D559.10
cortex, neonate N30.CNhs11107.1392-42F256.00
diencephalon, adult.CNhs10482.20-12F236.36
diencephalon, neonate N30.CNhs11201.1388-42B237.64
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G416.62
eyeball, embryo E12.CNhs11016.345-16C611.06
eyeball, embryo E14.CNhs10521.399-16E218.62
eyeball, embryo E15.CNhs10593.426-16C922.87
eyeball, embryo E17.CNhs11023.1261-18D418.99
eyeball, neonate N00.CNhs11207.633-15C619.66
eyeball, neonate N01.CNhs11140.1532-43E724.47
eyeball, neonate N02.CNhs11205.1551-44G819.40
eyeball, neonate N16.CNhs11188.777-19A290.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E34.09
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E834.07
hippocampus, neonate N00.CNhs11228.627-43G111.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D85.67
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B267.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G215.38
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H220.84
liver, neonate N10.CNhs11115.751-24B941.19
liver, neonate N20.CNhs11220.823-25A365.42
liver, neonate N25.CNhs11198.1368-26H154.54
liver, neonate N30.CNhs11106.1382-42D137.63
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F818.09
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C229.22
medulla oblongata, neonate N30.CNhs11200.1396-42A331.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.10
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I980.97
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G66.10
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B910.29
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F59.05
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G47.27
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C922.44
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A94.05
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I56.07
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B711.15
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A172.29
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A278.72
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A360.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A450.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.94
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A755.39
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A867.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A951.26
whole body, embryo E11.CNhs11014.324-5I87.37
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.89e-1864
neural plate1.89e-1864
presumptive neural plate1.89e-1864
ecto-epithelium1.68e-1673
ectoderm-derived structure8.01e-1695
ectoderm8.01e-1695
presumptive ectoderm8.01e-1695
structure with developmental contribution from neural crest3.50e-1592
central nervous system2.28e-1473
regional part of nervous system1.59e-1354
nervous system1.83e-1375
pre-chordal neural plate1.83e-1349
neural tube1.06e-1252
neural rod1.06e-1252
future spinal cord1.06e-1252
neural keel1.06e-1252
tube5.50e-11114
brain1.00e-1047
future brain1.00e-1047
anatomical conduit2.21e-10122
regional part of brain3.91e-1046
gray matter1.48e-0934
anterior neural tube2.54e-0940
regional part of forebrain7.88e-0939
forebrain7.88e-0939
future forebrain7.88e-0939
occipital lobe6.26e-0810
visual cortex6.26e-0810
neocortex6.26e-0810
brain grey matter1.59e-0729
regional part of telencephalon1.59e-0729
telencephalon1.59e-0729
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