FFCP PHASE1:Mm9::chr10:69903424..69903468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71721 | |EntrezGene=71721 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1873 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9S1,Q5DTU9,Q6NXX8,Q8BUV9,Q8BZ90,Q8BLN2 | |UniProt=G3X9S1,Q5DTU9,Q6NXX8,Q8BUV9,Q8BZ90,Q8BLN2 | ||
|association_with_transcript=8bp_to_ENSMUST00000105436,NM_001143777,uc007fns.2,uc007fnt.2,uc007fnu.2,uc007fnv.2,uc011xfw.1_5end | |association_with_transcript=8bp_to_ENSMUST00000105436,NM_001143777,uc007fns.2,uc007fnt.2,uc007fnu.2,uc007fnv.2,uc011xfw.1_5end | ||
|cluster_id=chr10:69903424..69903468,+ | |||
|description=CAGE_peak_1_at_Fam13c_5end | |description=CAGE_peak_1_at_Fam13c_5end | ||
|id=chr10:69903424..69903468,+ | |id=chr10:69903424..69903468,+ | ||
|ontology_enrichment_celltype=CL:0000393!3.07e-08!39;CL:0000211!3.07e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.11e-08,39;CL:0000211,2.11e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.14e-13!73;UBERON:0005743!4.14e-13!73;UBERON:0000073!1.77e-12!75;UBERON:0001016!1.77e-12!75;UBERON:0000955!4.32e-11!50;UBERON:0006238!4.32e-11!50;UBERON:0004121!6.00e-11!102;UBERON:0000924!6.00e-11!102;UBERON:0006601!6.00e-11!102;UBERON:0002616!1.32e-10!49;UBERON:0001049!3.86e-10!52;UBERON:0005068!3.86e-10!52;UBERON:0006241!3.86e-10!52;UBERON:0007135!3.86e-10!52;UBERON:0002346!1.72e-09!71;UBERON:0003075!1.72e-09!71;UBERON:0007284!1.72e-09!71;UBERON:0000033!1.66e-08!63;UBERON:0002020!3.23e-08!34;UBERON:0003080!4.02e-08!40;UBERON:0002791!7.51e-08!29;UBERON:0003528!7.51e-08!29;UBERON:0001893!7.51e-08!29;UBERON:0000025!1.01e-07!114;UBERON:0002780!1.09e-07!39;UBERON:0001890!1.09e-07!39;UBERON:0006240!1.09e-07!39;UBERON:0004111!1.58e-07!122;UBERON:0000468!2.26e-07!333;UBERON:0002021!7.03e-07!10;UBERON:0000411!7.03e-07!10;UBERON:0001950!7.03e-07!10;UBERON:0003056!7.66e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.45e-13,73;UBERON:0001016,3.72e-12,75;UBERON:0010314,7.07e-12,92;UBERON:0000073,9.70e-11,54;UBERON:0004121,8.53e-10,95;UBERON:0000924,8.53e-10,95;UBERON:0006601,8.53e-10,95;UBERON:0001049,8.74e-10,52;UBERON:0005068,8.74e-10,52;UBERON:0006241,8.74e-10,52;UBERON:0007135,8.74e-10,52;UBERON:0000955,3.20e-09,47;UBERON:0006238,3.20e-09,47;UBERON:0002616,9.30e-09,46;UBERON:0002346,1.33e-08,64;UBERON:0003075,1.33e-08,64;UBERON:0007284,1.33e-08,64;UBERON:0002020,6.11e-08,34;UBERON:0003080,7.09e-08,40;UBERON:0010371,8.10e-08,73;UBERON:0003528,1.52e-07,29;UBERON:0002791,1.52e-07,29;UBERON:0001893,1.52e-07,29;UBERON:0000025,1.86e-07,114;UBERON:0002780,1.94e-07,39;UBERON:0001890,1.94e-07,39;UBERON:0006240,1.94e-07,39;UBERON:0004111,3.80e-07,122;UBERON:0002021,5.22e-07,10;UBERON:0000411,5.22e-07,10;UBERON:0001950,5.22e-07,10 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,30.970617221992,28.4869176726836,17.9875817118448,1.56478268869608,0.65407546914134,0.878744730937887,0.972149495371417,0,0,0,0,0,10.0331180054019,80.2293631828519,50.0201929509119,5.86717736492834,8.46385566835253,4.43681982454325,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,5.69240209984969,11.5265491596466,3.21437798156281,3.64516033495565,2.3135745748652,6.28432165688368,9.93908434282261,2.44981598429908,2.20444583341944,5.51531271966013,28.6301290598411,19.025413374693,17.8183578577242,4.2203612073662,3.93396867490361,6.25096044668112,9.49222196604695,12.380777420697,15.279824777681,2.65165726926301,5.55249555116501,2.23679334990361,0.908714319998209,2.04043212288321,1.73918693221007,0.860423876981386,0,0,0,0,1.40444420131752,20.9629296771011,11.1707981979234,13.7802434059033,0.14084341977668,68.0130330295885,132.498724647456,106.660005473,0.216491041011214,0,0,1.02765491747154,2.33044095282455,9.79718117827843,2.77576522825817,3.65358573974569,3.22861696158482,5.12456977878917,4.23319345688537,4.02133092254962,3.21353458054686,22.1237016087465,0.884610551949874,2.58826959915855,1.54589062922275,2.42437626567611,0,9.07620470735796,10.8912287542997,0.510914110417183,0,0,0,17.2259235315546,22.4175295381127,4.90051973240171,22.2495129846114,23.0143911597297,17.2464076984435,25.7963608277735,4.78645010096487,3.4833951770826,0.252722758433675,2.73574412652416,1.43132487258974,1.83921683546778,1.80062129805349,2.26057226753573,3.19771546011241,2.43416068541215,2.24884138943349,7.24369438069244,1.72454394346274,2.26927296201383,3.16712023495108,2.19195732427575,3.33656699070717,4.87553033131033,7.40815691068596,2.18937693500343,0,0,0,2.89976081549703,2.34526059981096,5.22179978236943,4.97163944728941,6.09969118416952,3.5481435964097,6.27841650826101,7.51165523918934,6.07179780309281,3.29119699826961,3.447516745661,5.6748166682099,4.23979963533464,4.17145219052996,5.50246316917524,48.7872680668775,9.2614151141356,0,0.528901133327089,1.49301775374664,0.928946687441754,2.70621668776396,3.83198696784351,3.7804267453628,1.52180500890047,1.42358718463353,2.30578536613615,1.50801125280162,2.38747766449381,0.779856348476481,0.898819408654221,0.864552199498777,0.995706366271836,0.758671603812327,1.94222471436539,3.38123207019241,3.86937522906097,3.49114476901726,2.73529697572242,2.97211724484009,1.91893192373483,1.255989822731,1.85095745882701,0.296452627087149,0.500535317148282,0.393117990226406,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,5.54259570499814,1.32643988239339,2.60743962307241,1.35796068620151,5.63256595892405,3.51763140627813,9.52174563544055,5.07347484430277,9.30047350226527,6.64394068946325,7.97273843287435,6.06294264448231,7.08008425650172,8.82359257347221,0,0,1.96705709207614,1.37968373152366,23.7614873181932,30.4750385139728,34.0984686383485,3.7870639080656,3.78609863299508,3.51394869866975,3.66219776145758,4.30143836314594,7.35235624471901,6.51076020814315,3.23848561339915,4.9683495844923,5.92931666919785,18.6366363524648,3.69044221541498,3.02711526234334,3.09485222771795,8.08353602565424,0,2.6705869977048,3.62788268357701,4.33791683438566,5.61073596473468,9.22305443831782,5.94385074286909,5.45300594216258,3.92147116223193,5.68866164284469,2.10837217149998,5.15677716240934,2.7235168460303,2.70091641046965,1.94038025674132,3.64372959553707,2.12808280370728,2.49716344642899,2.96188237083818,6.08929898229199,1.17335854031855,3.81297727554876,2.64634077665954,4.61681508236144,7.10443477461984,2.11095237248546,3.58117032009409,2.79039529566604,0.582961673259701,27.999220603587,0.512612642393558,3.50857675537478,2.77791791054568,0.565105371014073,0.27338845544205,0.686334519619568,0,0,0,0,1.10717597753397,5.28630614529807,4.75223499615926,3.97267762427491,3.9305261474312,5.12484516262319,6.28166263512553,3.92633912976044,1.8146096260851,0.621339313086926,0.56369293868419,1.04661582230785,1.82004339502807,2.91676782516071,2.97067593998782,3.04121025883401,3.28600268208111,1.17183946359555,1.04859344425711,0.483168241652012,1.15212002503146,1.26404448251271,3.04087822935246,3.49217254360413,3.11809975146708,2.50637373934474,1.39076948346885,0.600977247599844,0.738447635872886,1.41353029927407,0.685861259894999,0.403304740547362,0.682205165178267,0.288635524920988,0.350630706544707,2.49403421976732,0.221985953374065,0,0,29.9443870749895,11.4486310025221,4.39563898241436,5.78794623513478,2.00628841614145,12.9892923801925,20.2543104063158,20.6242384838183,13.2326950404639,26.718218271055,21.1510291269116,24.9758325085768,10.8077088773813,20.8445508132734,26.9235362110946,2.28332164685189,3.59122386060928,2.56100408631201,1.94485373654635,3.14419743941973,3.67687016900028,7.3341420174533,6.79915688888351,6.09746498224449,6.06473308233114,10.1391719956096,4.14977951049368,3.83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| |phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,30.970617221992,28.4869176726836,17.9875817118448,1.56478268869608,0.65407546914134,0.878744730937887,0.972149495371417,0,0,0,0,0,10.0331180054019,80.2293631828519,50.0201929509119,5.86717736492834,8.46385566835253,4.43681982454325,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,5.69240209984969,11.5265491596466,3.21437798156281,3.64516033495565,2.3135745748652,6.28432165688368,9.93908434282261,2.44981598429908,2.20444583341944,5.51531271966013,28.6301290598411,19.025413374693,17.8183578577242,4.2203612073662,3.93396867490361,6.25096044668112,9.49222196604695,12.380777420697,15.279824777681,2.65165726926301,5.55249555116501,2.23679334990361,0.908714319998209,2.04043212288321,1.73918693221007,0.860423876981386,0,0,0,0,1.40444420131752,20.9629296771011,11.1707981979234,13.7802434059033,0.14084341977668,68.0130330295885,132.498724647456,106.660005473,0.216491041011214,0,0,1.02765491747154,2.33044095282455,9.79718117827843,2.77576522825817,3.65358573974569,3.22861696158482,5.12456977878917,4.23319345688537,4.02133092254962,3.21353458054686,22.1237016087465,0.884610551949874,2.58826959915855,1.54589062922275,2.42437626567611,0,9.07620470735796,10.8912287542997,0.510914110417183,0,0,0,17.2259235315546,22.4175295381127,4.90051973240171,22.2495129846114,23.0143911597297,17.2464076984435,25.7963608277735,4.78645010096487,3.4833951770826,0.252722758433675,2.73574412652416,1.43132487258974,1.83921683546778,1.80062129805349,2.26057226753573,3.19771546011241,2.43416068541215,2.24884138943349,7.24369438069244,1.72454394346274,2.26927296201383,3.16712023495108,2.19195732427575,3.33656699070717,4.87553033131033,7.40815691068596,2.18937693500343,0,0,0,2.89976081549703,2.34526059981096,5.22179978236943,4.97163944728941,6.09969118416952,3.5481435964097,6.27841650826101,7.51165523918934,6.07179780309281,3.29119699826961,3.447516745661,5.6748166682099,4.23979963533464,4.17145219052996,5.50246316917524,48.7872680668775,9.2614151141356,0,0.528901133327089,1.49301775374664,0.928946687441754,2.70621668776396,3.83198696784351,3.7804267453628,1.52180500890047,1.42358718463353,2.30578536613615,1.50801125280162,2.38747766449381,0.779856348476481,0.898819408654221,0.864552199498777,0.995706366271836,0.758671603812327,1.94222471436539,3.38123207019241,3.86937522906097,3.49114476901726,2.73529697572242,2.97211724484009,1.91893192373483,1.255989822731,1.85095745882701,0.296452627087149,0.500535317148282,0.393117990226406,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,5.54259570499814,1.32643988239339,2.60743962307241,1.35796068620151,5.63256595892405,3.51763140627813,9.52174563544055,5.07347484430277,9.30047350226527,6.64394068946325,7.97273843287435,6.06294264448231,7.08008425650172,8.82359257347221,0,0,1.96705709207614,1.37968373152366,23.7614873181932,30.4750385139728,34.0984686383485,3.7870639080656,3.78609863299508,3.51394869866975,3.66219776145758,4.30143836314594,7.35235624471901,6.51076020814315,3.23848561339915,4.9683495844923,5.92931666919785,18.6366363524648,3.69044221541498,3.02711526234334,3.09485222771795,8.08353602565424,0,2.6705869977048,3.62788268357701,4.33791683438566,5.61073596473468,9.22305443831782,5.94385074286909,5.45300594216258,3.92147116223193,5.68866164284469,2.10837217149998,5.15677716240934,2.7235168460303,2.70091641046965,1.94038025674132,3.64372959553707,2.12808280370728,2.49716344642899,2.96188237083818,6.08929898229199,1.17335854031855,3.81297727554876,2.64634077665954,4.61681508236144,7.10443477461984,2.11095237248546,3.58117032009409,2.79039529566604,0.582961673259701,27.999220603587,0.512612642393558,3.50857675537478,2.77791791054568,0.565105371014073,0.27338845544205,0.686334519619568,0,0,0,0,1.10717597753397,5.28630614529807,4.75223499615926,3.97267762427491,3.9305261474312,5.12484516262319,6.28166263512553,3.92633912976044,1.8146096260851,0.621339313086926,0.56369293868419,1.04661582230785,1.82004339502807,2.91676782516071,2.97067593998782,3.04121025883401,3.28600268208111,1.17183946359555,1.04859344425711,0.483168241652012,1.15212002503146,1.26404448251271,3.04087822935246,3.49217254360413,3.11809975146708,2.50637373934474,1.39076948346885,0.600977247599844,0.738447635872886,1.41353029927407,0.685861259894999,0.403304740547362,0.682205165178267,0.288635524920988,0.350630706544707,2.49403421976732,0.221985953374065,0,0,29.9443870749895,11.4486310025221,4.39563898241436,5.78794623513478,2.00628841614145,12.9892923801925,20.2543104063158,20.6242384838183,13.2326950404639,26.718218271055,21.1510291269116,24.9758325085768,10.8077088773813,20.8445508132734,26.9235362110946,2.28332164685189,3.59122386060928,2.56100408631201,1.94485373654635,3.14419743941973,3.67687016900028,7.3341420174533,6.79915688888351,6.09746498224449,6.06473308233114,10.1391719956096,4.14977951049368,3.83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| ||
|short_description=p1@Fam13c | |short_description=p1@Fam13c | ||
}} | }} |
Latest revision as of 06:16, 26 September 2015
Short description: | p1@Fam13c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam13c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1873 |
Association with transcript: | 8bp_to_ENSMUST00000105436, NM_001143777, uc007fns.2, uc007fnt.2, uc007fnu.2, uc007fnv.2, uc011xfw.1_5end |
EntrezGene: | Fam13c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.11e-08 | 39 |
electrically active cell | 2.11e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.45e-13 | 73 |
nervous system | 3.72e-12 | 75 |
structure with developmental contribution from neural crest | 7.07e-12 | 92 |
regional part of nervous system | 9.70e-11 | 54 |
ectoderm-derived structure | 8.53e-10 | 95 |
ectoderm | 8.53e-10 | 95 |
presumptive ectoderm | 8.53e-10 | 95 |
neural tube | 8.74e-10 | 52 |
neural rod | 8.74e-10 | 52 |
future spinal cord | 8.74e-10 | 52 |
neural keel | 8.74e-10 | 52 |
brain | 3.20e-09 | 47 |
future brain | 3.20e-09 | 47 |
regional part of brain | 9.30e-09 | 46 |
neurectoderm | 1.33e-08 | 64 |
neural plate | 1.33e-08 | 64 |
presumptive neural plate | 1.33e-08 | 64 |
gray matter | 6.11e-08 | 34 |
anterior neural tube | 7.09e-08 | 40 |
ecto-epithelium | 8.10e-08 | 73 |
brain grey matter | 1.52e-07 | 29 |
regional part of telencephalon | 1.52e-07 | 29 |
telencephalon | 1.52e-07 | 29 |
tube | 1.86e-07 | 114 |
regional part of forebrain | 1.94e-07 | 39 |
forebrain | 1.94e-07 | 39 |
future forebrain | 1.94e-07 | 39 |
anatomical conduit | 3.80e-07 | 122 |
occipital lobe | 5.22e-07 | 10 |
visual cortex | 5.22e-07 | 10 |
neocortex | 5.22e-07 | 10 |