FFCP PHASE1:Mm9::chr11:120209518..120209559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:120209518..120209559,- | |||
|description=CAGE_peak_at_chr11:120209518..120209559,- | |description=CAGE_peak_at_chr11:120209518..120209559,- | ||
|id=chr11:120209518..120209559,- | |id=chr11:120209518..120209559,- | ||
|ontology_enrichment_celltype=CL:0000393!6.86e-14!39;CL:0000211!6.86e-14!39;CL:0000540!4.48e-13!33;CL:0000047!4.48e-13!33;CL:0000031!4.48e-13!33;CL:0000404!4.48e-13!33;CL:0000117!5.73e-13!23;CL:0000337!5.73e-13!23;CL:0000055!2.71e-12!50;CL:0002319!3.76e-12!43;CL:0000221!4.96e-12!44;CL:0000133!4.96e-12!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.29e-17,23;CL:0000337,4.29e-17,23;CL:0000393,1.95e-14,39;CL:0000211,1.95e-14,39;CL:0000540,4.15e-14,33;CL:0000047,4.15e-14,33;CL:0000031,4.15e-14,33;CL:0000404,4.15e-14,33;CL:0002319,1.53e-11,43;CL:0000221,5.10e-11,44;CL:0000133,5.10e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.30e-17!75;UBERON:0001016!1.30e-17!75;UBERON:0001017!2.27e-17!73;UBERON:0005743!2.27e-17!73;UBERON:0001049!1.37e-14!52;UBERON:0005068!1.37e-14!52;UBERON:0006241!1.37e-14!52;UBERON:0007135!1.37e-14!52;UBERON:0002346!2.26e-12!71;UBERON:0003075!2.26e-12!71;UBERON:0007284!2.26e-12!71;UBERON:0002020!3.10e-12!34;UBERON:0000955!4.03e-12!50;UBERON:0006238!4.03e-12!50;UBERON:0002616!6.39e-12!49;UBERON:0004121!1.60e-11!102;UBERON:0000924!1.60e-11!102;UBERON:0006601!1.60e-11!102;UBERON:0003080!1.85e-10!40;UBERON:0002780!4.73e-10!39;UBERON:0001890!4.73e-10!39;UBERON:0006240!4.73e-10!39;UBERON:0000033!9.56e-10!63;UBERON:0002791!4.02e-09!29;UBERON:0003528!4.02e-09!29;UBERON:0001893!4.02e-09!29;UBERON:0003056!8.48e-09!49;UBERON:0007811!1.55e-08!86;UBERON:0000153!3.28e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.51e-18,73;UBERON:0000073,6.42e-18,54;UBERON:0001016,8.72e-18,75;UBERON:0001049,2.35e-17,52;UBERON:0005068,2.35e-17,52;UBERON:0006241,2.35e-17,52;UBERON:0007135,2.35e-17,52;UBERON:0002020,2.91e-16,34;UBERON:0002346,4.58e-16,64;UBERON:0003075,4.58e-16,64;UBERON:0007284,4.58e-16,64;UBERON:0000955,5.39e-13,47;UBERON:0006238,5.39e-13,47;UBERON:0004121,8.73e-13,95;UBERON:0000924,8.73e-13,95;UBERON:0006601,8.73e-13,95;UBERON:0002616,9.92e-13,46;UBERON:0010371,1.32e-12,73;UBERON:0003080,1.45e-12,40;UBERON:0002780,5.02e-12,39;UBERON:0001890,5.02e-12,39;UBERON:0006240,5.02e-12,39;UBERON:0003528,5.22e-12,29;UBERON:0002791,5.22e-12,29;UBERON:0001893,5.22e-12,29;UBERON:0003056,2.65e-10,49;UBERON:0010314,1.31e-08,92;UBERON:0002420,1.84e-07,8;UBERON:0007245,1.84e-07,8;UBERON:0010009,1.84e-07,8;UBERON:0010011,1.84e-07,8;UBERON:0000454,1.84e-07,8 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0.671517087647559,0.700837921786577,1.16210991097419,0.703943610758334,0.70219357896598,0.513653904676515,0.398860794976682,1.02720437958723,1.04904482902797,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,3.82694805679814,0.198581902401771,0.261199789138935,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,2.92972141515835,0.7813353445238,1.57057123192139,1.17646297606203,4.09827290975067,0.971020706062307,0.755380907853464,1.4192770370732,0.550640256485045,0.782391344348039,1.09012578190223,1.5378032791413,2.3331587888914,0.839918529752175,0,0.503347818173209,0.725362142011344,0.336093799142464,1.80081605225163,1.43266719969378,2.57836046138721,5.46254444320914,6.87688273053643,11.4089652631112,1.35537812827653,1.77858959222228,0,1.97773272513395,0.7104801149461,0.299600110518405,0.768436610643109,1.65903379693564,1.62007125998029,2.10324961351382,15.996455126613,11.7060326704355,2.69479758272899,2.87536413054709,1.83843757322004,1.10115880999389,2.042997409363,1.99688493233117,9.62769900430415,10.4295913706747,5.73004707612436,3.07101298901519,3.93933827022176,1.98637722109853,11.1958862479994,9.96601765593721,8.76077395378913,0.908714319998209,1.13357340160178,0.579728977403356,0,0,0.539703191637817,0,0,1.12355536105401,1.1930122580464,0.519572009205738,0,0.704217098883403,0,0,7.11066703153331,0.865964164044856,0.253359865475099,0,0.5709193985953,0.258937883647172,0.742210695324124,0.346970653532272,0.913396434936424,0.691846491768175,0.904335843315735,0.23517741427141,0.251333182659351,5.43828929015623,0.289198713839823,0,0.485300549842228,0,0,0,1.17112318804619,0.41889341362691,0.255457055208591,0.359445373517761,1.19980546198682,0.254140454146129,2.09706895166752,2.28750301409313,7.16229807043327,1.56441888173049,1.53429274398198,1.24672826735736,2.75810147215188,0.203678727700633,0.248813941220186,0,0,0.520481771850815,0.689706313300419,1.62055916824814,1.50704817835715,0.680364991513279,0.384341160854549,1.03071897015702,0,0.646703978798527,0.189106080167819,0.703804496655795,1.09597866213787,1.11218899690239,1.39300866608867,0.411564272815887,0.398068533636986,0,0.772043721344145,0,0.621377317606506,0.703578179943289,0.36012412292203,0,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0,0.146199987425332,0.439100230582101,0.268412837520744,2.10289948564127,3.19004298375782,0,0.264450566663544,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,1.13800740571849,0.571242563048644,0,0.610953983535943,0.193952487167626,0.561086559122548,0.252946148497029,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.651859905768103,0.509235257325564,0.704070744865506,0.670025029767263,1.42826184531608,0.780534591431195,0.630540576424764,0.664394068946325,0.637819074629948,1.3109065177259,1.03610989119537,0.578596234326046,0,1.63171705145613,0,0.275936746304732,3.05046120976805,1.40654023910644,0.655739781506702,0,2.2085575359138,1.17131623288992,1.50796378412959,0.477937595905104,0.891194696329576,0.849229592366497,0.809621403349789,2.04579100537918,0.790575555893047,1.28528526568723,0.141940085208269,1.42452482933804,0.81443479676788,0.824850614862677,0,0.728341908464944,0.604647113929502,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.720244376125241,1.4229455216103,0.857348140126369,0.886701168211368,1.42695054081656,1.97458824722545,3.04464949114599,2.3467170806371,6.14313005505079,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0,0.582961673259701,2.78137953015765,0.170870880797853,0,0.555583582109135,0,0,0.228778173206523,0.169978429993855,0,0.414599921413271,0,0.474503990371703,0.406638934253697,0.648032044930808,0.418176592028937,0.87345025498471,1.07891477107857,0.247960367176008,0.26175594198403,0,0,21.4203316699992,0.897099276263873,1.15820943319968,1.36115831840833,0.516639293910924,0.337912250981556,0.469428954583016,0.5208175393758,0.734015410979976,10.6297013163443,12.3852902690882,2.52808896502543,0.608175645870493,0.102710957164827,0.389762468933385,0.895133478337407,0.596044064343795,0.360586348559907,1.03382669022204,0.605798699688886,0.304827226619999,1.10908803650525,0.974578807397524,0.865906574762965,1.28564592399726,0.453460767230423,0.887943813496259,1.61484941897056,3.8613461763738,0.386379188064381,0.563047426353546,0.549454872801795,0.857473516316263,1.00314420807073,2.82375921308533,2.76195141904306,3.43737308063638,2.06223818812425,0,0,4.72515750162264,0.900642406448441,0.906284817968409,0,1.03787347584177,1.59609949360412,0.170733605754134,1.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|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0.671517087647559,0.700837921786577,1.16210991097419,0.703943610758334,0.70219357896598,0.513653904676515,0.398860794976682,1.02720437958723,1.04904482902797,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,3.82694805679814,0.198581902401771,0.261199789138935,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,2.92972141515835,0.7813353445238,1.57057123192139,1.17646297606203,4.09827290975067,0.971020706062307,0.755380907853464,1.4192770370732,0.550640256485045,0.782391344348039,1.09012578190223,1.5378032791413,2.3331587888914,0.839918529752175,0,0.503347818173209,0.725362142011344,0.336093799142464,1.80081605225163,1.43266719969378,2.57836046138721,5.46254444320914,6.87688273053643,11.4089652631112,1.35537812827653,1.77858959222228,0,1.97773272513395,0.7104801149461,0.299600110518405,0.768436610643109,1.65903379693564,1.62007125998029,2.10324961351382,15.996455126613,11.7060326704355,2.69479758272899,2.87536413054709,1.83843757322004,1.10115880999389,2.042997409363,1.99688493233117,9.62769900430415,10.4295913706747,5.73004707612436,3.07101298901519,3.93933827022176,1.98637722109853,11.1958862479994,9.96601765593721,8.76077395378913,0.908714319998209,1.13357340160178,0.579728977403356,0,0,0.539703191637817,0,0,1.12355536105401,1.1930122580464,0.519572009205738,0,0.704217098883403,0,0,7.11066703153331,0.865964164044856,0.253359865475099,0,0.5709193985953,0.258937883647172,0.742210695324124,0.346970653532272,0.913396434936424,0.691846491768175,0.904335843315735,0.23517741427141,0.251333182659351,5.43828929015623,0.289198713839823,0,0.485300549842228,0,0,0,1.17112318804619,0.41889341362691,0.255457055208591,0.359445373517761,1.19980546198682,0.254140454146129,2.09706895166752,2.28750301409313,7.16229807043327,1.56441888173049,1.53429274398198,1.24672826735736,2.75810147215188,0.203678727700633,0.248813941220186,0,0,0.520481771850815,0.689706313300419,1.62055916824814,1.50704817835715,0.680364991513279,0.384341160854549,1.03071897015702,0,0.646703978798527,0.189106080167819,0.703804496655795,1.09597866213787,1.11218899690239,1.39300866608867,0.411564272815887,0.398068533636986,0,0.772043721344145,0,0.621377317606506,0.703578179943289,0.36012412292203,0,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0,0.146199987425332,0.439100230582101,0.268412837520744,2.10289948564127,3.19004298375782,0,0.264450566663544,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,1.13800740571849,0.571242563048644,0,0.610953983535943,0.193952487167626,0.561086559122548,0.252946148497029,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.651859905768103,0.509235257325564,0.704070744865506,0.670025029767263,1.42826184531608,0.780534591431195,0.630540576424764,0.664394068946325,0.637819074629948,1.3109065177259,1.03610989119537,0.578596234326046,0,1.63171705145613,0,0.275936746304732,3.05046120976805,1.40654023910644,0.655739781506702,0,2.2085575359138,1.17131623288992,1.50796378412959,0.477937595905104,0.891194696329576,0.849229592366497,0.809621403349789,2.04579100537918,0.790575555893047,1.28528526568723,0.141940085208269,1.42452482933804,0.81443479676788,0.824850614862677,0,0.728341908464944,0.604647113929502,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.720244376125241,1.4229455216103,0.857348140126369,0.886701168211368,1.42695054081656,1.97458824722545,3.04464949114599,2.3467170806371,6.14313005505079,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0,0.582961673259701,2.78137953015765,0.170870880797853,0,0.555583582109135,0,0,0.228778173206523,0.169978429993855,0,0.414599921413271,0,0.474503990371703,0.406638934253697,0.648032044930808,0.418176592028937,0.87345025498471,1.07891477107857,0.247960367176008,0.26175594198403,0,0,21.4203316699992,0.897099276263873,1.15820943319968,1.36115831840833,0.516639293910924,0.337912250981556,0.469428954583016,0.5208175393758,0.734015410979976,10.6297013163443,12.3852902690882,2.52808896502543,0.608175645870493,0.102710957164827,0.389762468933385,0.895133478337407,0.596044064343795,0.360586348559907,1.03382669022204,0.605798699688886,0.304827226619999,1.10908803650525,0.974578807397524,0.865906574762965,1.28564592399726,0.453460767230423,0.887943813496259,1.61484941897056,3.8613461763738,0.386379188064381,0.563047426353546,0.549454872801795,0.857473516316263,1.00314420807073,2.82375921308533,2.76195141904306,3.43737308063638,2.06223818812425,0,0,4.72515750162264,0.900642406448441,0.906284817968409,0,1.03787347584177,1.59609949360412,0.170733605754134,1.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| ||
|short_description=p@chr11:120209518..120209559,- | |short_description=p@chr11:120209518..120209559,- | ||
}} | }} |
Latest revision as of 14:53, 5 August 2015
Short description: | p@chr11:120209518..120209559, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:120209518..120209559, - |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.29e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.29e-17 | 23 |
electrically responsive cell | 1.95e-14 | 39 |
electrically active cell | 1.95e-14 | 39 |
neuron | 4.15e-14 | 33 |
neuronal stem cell | 4.15e-14 | 33 |
neuroblast | 4.15e-14 | 33 |
electrically signaling cell | 4.15e-14 | 33 |
neural cell | 1.53e-11 | 43 |
ectodermal cell | 5.10e-11 | 44 |
neurectodermal cell | 5.10e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.51e-18 | 73 |
regional part of nervous system | 6.42e-18 | 54 |
nervous system | 8.72e-18 | 75 |
neural tube | 2.35e-17 | 52 |
neural rod | 2.35e-17 | 52 |
future spinal cord | 2.35e-17 | 52 |
neural keel | 2.35e-17 | 52 |
gray matter | 2.91e-16 | 34 |
neurectoderm | 4.58e-16 | 64 |
neural plate | 4.58e-16 | 64 |
presumptive neural plate | 4.58e-16 | 64 |
brain | 5.39e-13 | 47 |
future brain | 5.39e-13 | 47 |
ectoderm-derived structure | 8.73e-13 | 95 |
ectoderm | 8.73e-13 | 95 |
presumptive ectoderm | 8.73e-13 | 95 |
regional part of brain | 9.92e-13 | 46 |
ecto-epithelium | 1.32e-12 | 73 |
anterior neural tube | 1.45e-12 | 40 |
regional part of forebrain | 5.02e-12 | 39 |
forebrain | 5.02e-12 | 39 |
future forebrain | 5.02e-12 | 39 |
brain grey matter | 5.22e-12 | 29 |
regional part of telencephalon | 5.22e-12 | 29 |
telencephalon | 5.22e-12 | 29 |
pre-chordal neural plate | 2.65e-10 | 49 |
structure with developmental contribution from neural crest | 1.31e-08 | 92 |
basal ganglion | 1.84e-07 | 8 |
nuclear complex of neuraxis | 1.84e-07 | 8 |
aggregate regional part of brain | 1.84e-07 | 8 |
collection of basal ganglia | 1.84e-07 | 8 |
cerebral subcortex | 1.84e-07 | 8 |