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FFCP PHASE1:Mm9::chr10:80522879..80522949,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=52551
|EntrezGene=52551
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q8BJU0,Q3TN35
|UniProt=Q8BJU0,Q3TN35
|association_with_transcript=0bp_to_ENSMUST00000005067,NM_024499,uc007gft.1,uc007gfu.1_5end
|association_with_transcript=0bp_to_ENSMUST00000005067,NM_024499,uc007gft.1,uc007gfu.1_5end
|cluster_id=chr10:80522879..80522949,-
|description=CAGE_peak_1_at_Sgta_5end
|description=CAGE_peak_1_at_Sgta_5end
|id=chr10:80522879..80522949,-
|id=chr10:80522879..80522949,-
|ontology_enrichment_celltype=CL:0000055!2.75e-18!50;CL:0002319!1.27e-16!43;CL:0000221!9.60e-16!44;CL:0000133!9.60e-16!44;CL:0000117!4.05e-14!23;CL:0000337!4.05e-14!23;CL:0000393!1.27e-13!39;CL:0000211!1.27e-13!39;CL:0002321!4.14e-12!70;CL:0000220!4.14e-12!70;CL:0000540!6.71e-12!33;CL:0000047!6.71e-12!33;CL:0000031!6.71e-12!33;CL:0000404!6.71e-12!33
|ontology_enrichment_celltype=CL:0000055!2.75e-18!50;CL:0002319!1.27e-16!43;CL:0000221!9.60e-16!44;CL:0000133!9.60e-16!44;CL:0000117!4.05e-14!23;CL:0000337!4.05e-14!23;CL:0000393!1.27e-13!39;CL:0000211!1.27e-13!39;CL:0002321!4.14e-12!70;CL:0000220!4.14e-12!70;CL:0000540!6.71e-12!33;CL:0000047!6.71e-12!33;CL:0000031!6.71e-12!33;CL:0000404!6.71e-12!33
|ontology_enrichment_celltype_v019_2=CL:0002319,1.27e-16,43;CL:0000221,9.60e-16,44;CL:0000133,9.60e-16,44;CL:0000117,4.05e-14,23;CL:0000337,4.05e-14,23;CL:0000393,1.27e-13,39;CL:0000211,1.27e-13,39;CL:0002321,4.14e-12,70;CL:0000540,6.71e-12,33;CL:0000047,6.71e-12,33;CL:0000031,6.71e-12,33;CL:0000404,6.71e-12,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.72e-28!75;UBERON:0001016!2.72e-28!75;UBERON:0001017!1.27e-27!73;UBERON:0005743!1.27e-27!73;UBERON:0004121!4.00e-23!102;UBERON:0000924!4.00e-23!102;UBERON:0006601!4.00e-23!102;UBERON:0001049!1.71e-22!52;UBERON:0005068!1.71e-22!52;UBERON:0006241!1.71e-22!52;UBERON:0007135!1.71e-22!52;UBERON:0000955!4.12e-21!50;UBERON:0006238!4.12e-21!50;UBERON:0002616!8.70e-21!49;UBERON:0002346!1.04e-19!71;UBERON:0003075!1.04e-19!71;UBERON:0007284!1.04e-19!71;UBERON:0002020!1.62e-17!34;UBERON:0000033!1.61e-16!63;UBERON:0003080!1.82e-16!40;UBERON:0002780!5.57e-16!39;UBERON:0001890!5.57e-16!39;UBERON:0006240!5.57e-16!39;UBERON:0002791!7.55e-15!29;UBERON:0003528!7.55e-15!29;UBERON:0001893!7.55e-15!29;UBERON:0003056!2.74e-14!49;UBERON:0000025!1.29e-10!114;UBERON:0000956!1.30e-10!21;UBERON:0001869!1.30e-10!21;UBERON:0000203!1.30e-10!21;UBERON:0004111!7.36e-09!122;UBERON:0002619!1.33e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.72e-28,75;UBERON:0001017,1.27e-27,73;UBERON:0000073,1.19e-23,54;UBERON:0004121,1.42e-22,95;UBERON:0000924,1.42e-22,95;UBERON:0006601,1.42e-22,95;UBERON:0001049,1.71e-22,52;UBERON:0005068,1.71e-22,52;UBERON:0006241,1.71e-22,52;UBERON:0007135,1.71e-22,52;UBERON:0000955,1.48e-19,47;UBERON:0006238,1.48e-19,47;UBERON:0002346,1.53e-19,64;UBERON:0003075,1.53e-19,64;UBERON:0007284,1.53e-19,64;UBERON:0002616,3.08e-19,46;UBERON:0010314,2.08e-18,92;UBERON:0002020,1.62e-17,34;UBERON:0003080,1.82e-16,40;UBERON:0002780,5.57e-16,39;UBERON:0001890,5.57e-16,39;UBERON:0006240,5.57e-16,39;UBERON:0010371,1.33e-15,73;UBERON:0003528,7.55e-15,29;UBERON:0002791,7.55e-15,29;UBERON:0001893,7.55e-15,29;UBERON:0003056,2.74e-14,49;UBERON:0000025,1.29e-10,114;UBERON:0000956,1.30e-10,21;UBERON:0001869,1.30e-10,21;UBERON:0000203,1.30e-10,21;UBERON:0004111,7.36e-09,122;UBERON:0002619,1.33e-08,17
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460779,45.7942645084437,48.0903080833278,46.0745009504435,47.4722499274569,45.7073610161108,47.9013373830774,58.5859679278904,43.4937519160848,239.569498940781,56.517254404624,51.9539660035286,66.5023064136643,62.7716742101773,51.024749898215,44.361036208095,51.0401188588284,44.1457840032243,77.0653345434959,117.804272559467,35.7092566309841,53.5194568366033,44.6792663666999,34.9487013810269,44.3986205255354,43.9085794066595,39.4241074425498,41.7961361904053,38.973049679985,40.1609871071849,36.5999052046731,36.0594158737084,34.2514156239573,38.4525008177362,58.0429782054941,61.2681231312419,62.2614164869761,62.6209619038013,47.717829725951,46.1698889609908,46.1542093153508,54.6639366651618,47.6493498833595,88.6660392908795,81.9378920982775,91.6632821503035,80.4272893368458,88.3756450504129,84.6041165076465,89.1029700305984,88.7132770351714,90.6284817968409,92.6790958035758,58.3284893423073,56.6615320229464,61.2933644657342,54.6990113403662,51.3552248438557,51.660025874454,54.0059548557925,57.4837809696515,51.6679927442823,53.8245061056889,49.9354220783772,54.3243863191899,51.2219045860257,55.1256562205924,55.3103566042556,63.3470609406488,58.4057002762072,68.0969548236879,54.8074248068398,54.0220036893238,51.4303878578123,54.1301208785979,46.4950570397276,50.435206571418,50.9131748046939,52.3764422849478,54.3296079432135,56.5599879591362,49.0252850983561,47.6970930909078,60.2665892070805,58.905680460587,66.7046600366594,59.9605575389688,49.1911858001911,70.9462041343766,64.5651239309327,50.9244398094467,72.6895661861605,63.0891458681814,52.4021308502153
|phase1_expression=42.2792956356656,57.5809422604946,66.4298889508723,63.2150201631275,70.626297922435,40.9625423465011,41.349437385408,23.6295681898085,16.04991432529,17.3207749478275,36.8118631684836,30.7122812132045,27.5633175189241,29.8103572248781,26.9818907070687,26.9292105628469,20.9868563438444,32.6503341145776,29.4796032252338,28.00971701867,71.6064503072007,38.7234709683453,28.9931765944218,53.9174464813781,43.8171726838295,52.2551087344668,52.122201535248,58.6081752905618,62.517705001147,52.4222669900656,49.8893648974436,56.5177299379072,60.8914139708724,47.5445043046316,34.662194370153,38.5664377231702,37.3629921960135,35.9937202433741,28.9094077473806,30.8879008944541,41.764435650202,41.6657745824652,34.4712350652119,89.2608439446843,94.381922965368,87.7353475332838,125.965006440034,97.8932952148205,93.586313844885,86.1324452899076,80.4921924345834,89.1265899062824,37.5833037569329,31.9159342484992,30.2484419228218,72.0326420900652,65.9026911859141,62.911995257848,122.401458820057,128.015816983832,125.498617894223,116.901363563851,89.8187744072251,109.33781564969,111.741898970068,123.623540000621,110.85204089181,149.076702464763,97.675614794586,96.3942399688271,108.527680057313,107.119119151426,107.342110902484,100.564946155477,110.701519026063,102.952504100322,95.8008164694682,92.8286947879315,87.09490435629,124.896314480494,127.716750468964,124.498295563066,109.998101606544,94.5441184853222,86.4838082416745,78.6658323214693,95.1042827738008,109.602874145277,73.1515027598558,75.6471316668923,33.0445517119913,57.6483997577529,54.39770669662,68.002602146365,78.622946511168,74.8204901452551,68.3964326041632,89.6463496760584,97.9393237352815,104.23517448055,42.3938693527808,64.1632387071589,78.9896243090602,35.5533351576666,50.6589035966241,48.6450941712189,46.0027244963453,54.0089751071154,32.1082975722493,76.7445858965144,62.4547176358089,52.9769932263126,68.0315716905373,56.9731581288913,52.56215208966,83.6939498255639,71.1921507074997,100.785751773178,44.2305275974937,48.0447544343805,50.1310246905093,43.1538975290348,55.9175283654366,81.6858423662216,86.08259650033,62.8424355813135,20.4883862905124,20.3966928537759,22.6185004190055,90.3237555611081,70.4550928340685,99.5182468733886,87.0859844163305,93.8475728402313,94.3357722300403,79.011495113998,46.6424286434449,38.814974830349,54.8408385801074,71.1293472896282,53.2192611717458,56.7858197950678,57.4398194079064,46.2663790755645,50.21093637368,53.9358762399218,63.1549623532572,59.5017752699736,80.4068613639502,68.0781888604149,60.3512355882345,62.2515880094313,45.3217016237725,51.5413206452806,48.7703663286826,59.9093143123664,23.1730351813367,32.1684883893394,32.110475431702,54.6812039493725,53.2374156157088,54.3787425612265,55.6350128625244,54.8972206575257,47.5142707693125,54.180409126845,66.8000769485052,58.1491404988504,65.4948202655652,59.2644545325534,66.6385614466934,63.7431945174449,68.0605357402257,69.1163056615915,85.1674291684715,87.6747297471503,79.6309266990953,55.0057178660172,54.6017921370199,47.6085177313899,52.449056758092,57.2781209930293,57.8182913996663,72.8564148011101,58.8416036315194,69.8323568029806,73.3898809696787,73.2159817111435,76.6208862378142,67.4114556490666,55.7636168676711,52.3741548658986,70.3667912535933,51.1833336491585,50.7184810528862,45.2105947816598,51.5913615865884,52.0407783586164,45.0876509695954,57.125127268106,54.1645611052743,62.5623621083529,67.8876516029571,36.7059232575407,38.5255630421878,38.2265591054251,32.8633396649375,41.2412943176633,38.9577553225572,42.8667244801708,37.7775078385832,42.2824576309646,27.3159592401974,65.1246658419881,62.7195722960267,67.4385604118788,64.0448766273227,92.1467125804031,48.0358294433172,56.8474235311454,60.9489011893177,43.7942321299985,38.7238909676028,44.8916769944066,46.4185099727727,48.3931446687341,39.8816914588663,39.8636441367795,44.3284256867814,41.6212819377975,41.9624505934126,44.117962867361,49.7611236999598,72.8833616317071,44.7505488447323,46.9092468718045,81.8808008937739,80.8760637486202,56.7214911003297,88.6172954487349,59.9465616890888,53.8805467129361,55.1483898195965,61.6539498717584,63.4976221134823,58.0306888117106,67.6033871797074,71.6026851882714,60.4790300258181,78.7237225233427,43.859486329355,64.8158797348809,51.47227915573,47.6763655390628,34.5137359683903,55.3539850433358,55.0228873675847,43.9449835831243,57.8791710046315,43.9632261559816,43.4159532522612,39.9887102425256,40.997198514243,35.7121536467472,35.8423269154996,37.1287955693473,65.3644043047273,57.439488995988,80.8491773642216,64.3011105094777,62.9557829430071,59.5751850790916,63.3513729318166,80.3787465662542,62.8920177610744,49.7805366529977,47.1930771837619,56.0613260001032,46.8246837418126,52.5325576124238,56.821235745493,53.674074216635,83.6550001127672,86.593616038908,28.8771788548371,43.1348554043135,32.5942368170693,27.8785316366943,30.2094243263466,32.7152787685327,28.8963330989554,25.1912614182584,26.2579950228405,63.0082607889975,62.7926947258554,49.8132694460779,45.7942645084437,48.0903080833278,46.0745009504435,47.4722499274569,45.7073610161108,47.9013373830774,58.5859679278904,43.4937519160848,239.569498940781,56.517254404624,51.9539660035286,66.5023064136643,62.7716742101773,51.024749898215,44.361036208095,51.0401188588284,44.1457840032243,77.0653345434959,117.804272559467,35.7092566309841,53.5194568366033,44.6792663666999,34.9487013810269,44.3986205255354,43.9085794066595,39.4241074425498,41.7961361904053,38.973049679985,40.1609871071849,36.5999052046731,36.0594158737084,34.2514156239573,38.4525008177362,58.0429782054941,61.2681231312419,62.2614164869761,62.6209619038013,47.717829725951,46.1698889609908,46.1542093153508,54.6639366651618,47.6493498833595,88.6660392908795,81.9378920982775,91.6632821503035,80.4272893368458,88.3756450504129,84.6041165076465,89.1029700305984,88.7132770351714,90.6284817968409,92.6790958035758,58.3284893423073,56.6615320229464,61.2933644657342,54.6990113403662,51.3552248438557,51.660025874454,54.0059548557925,57.4837809696515,51.6679927442823,53.8245061056889,49.9354220783772,54.3243863191899,51.2219045860257,55.1256562205924,55.3103566042556,63.3470609406488,58.4057002762072,68.0969548236879,54.8074248068398,54.0220036893238,51.4303878578123,54.1301208785979,46.4950570397276,50.435206571418,50.9131748046939,52.3764422849478,54.3296079432135,56.5599879591362,49.0252850983561,47.6970930909078,60.2665892070805,58.905680460587,66.7046600366594,59.9605575389688,49.1911858001911,70.9462041343766,64.5651239309327,50.9244398094467,72.6895661861605,63.0891458681814,52.4021308502153
|short_description=p1@Sgta
|short_description=p1@Sgta
}}
}}

Latest revision as of 10:35, 26 September 2015

Short description:p1@Sgta
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sgta_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000005067, NM_024499, uc007gft.1, uc007gfu.1_5end
EntrezGene:Sgta
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sgta

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G742.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I557.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I666.43
CD326+ enterocyte, pool1.CNhs13542.11848-124I363.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I470.63
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I740.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I841.35
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E636.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F130.71
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A326.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.65
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A371.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H238.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I928.99
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D153.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D243.82
GP2+ M cell, pool1.CNhs13228.11845-124H952.26
GP2+ M cell, pool2.CNhs13231.11846-124I152.12
GP2+ M cell, pool3.CNhs13240.11847-124I258.61
Ileum epithelium, pool1.CNhs13199.10252-104B962.52
Ileum epithelium, pool2.CNhs13232.10253-104C152.42
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C849.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I356.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G660.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F534.66
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F638.57
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.36
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H241.67
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H434.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D889.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D994.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B387.74
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7125.97
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C297.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B893.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C386.13
Mouse Astrocytes, donor2.CNhs12078.11552-120C480.49
Mouse Astrocytes, donor3.CNhs12107.11633-122C489.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A237.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A130.25
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C172.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E165.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C562.91
Mouse Granule cells, donor1.CNhs12131.11713-123C3122.40
Mouse Granule cells, donor2.CNhs12357.11731-123E3128.02
Mouse Granule cells, donor3.CNhs12108.11636-122C7125.50
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6116.90
Mouse Meningeal cells, donor3.CNhs12109.11639-122D189.82
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7109.34
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7111.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2123.62
Mouse Microglia, donor1.CNhs12629.11718-123C8110.85
Mouse Microglia, donor2.CNhs12634.11736-123E8149.08
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D597.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F596.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9108.53
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1107.12
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5107.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2100.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2110.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6102.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D395.80
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F392.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D787.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4124.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4127.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8124.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4110.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E594.54
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I686.48
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D678.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F695.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1109.60
Mouse Schwann, donor1.CNhs12507.11728-123D973.15
Mouse Schwann, donor2.CNhs12573.11746-123F975.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F757.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C454.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C868.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F478.62
Mouse hepatocyte, donor8.CNhs13091.11824-124F674.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A768.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I789.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E397.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8104.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G642.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H164.16
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I878.99
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G150.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G248.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G346.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B654.01
accessory axillary lymph node, adult.CNhs10475.1063-29H932.11
adrenal gland, adult.CNhs10508.49-24D776.74
adrenal gland, embryo E14.CNhs11038.406-44C562.45
adrenal gland, embryo E16.CNhs11004.1254-43D652.98
adrenal gland, embryo E17.CNhs11043.1263-45I168.03
adrenal gland, embryo E18.CNhs11026.1262-18F556.97
adrenal gland, neonate N00.CNhs11191.1311-23C152.56
adrenal gland, neonate N25.CNhs11223.1377-27I383.69
amnion, adult pregnant day17.5.CNhs10488.583-22A871.19
aorta, adult.CNhs10498.46-23H1100.79
bone (os femoris), adult.CNhs10483.56-12G244.23
bone (os femoris), neonate N02.CNhs11227.1985-43F548.04
bone (os femoris), neonate N16.CNhs11225.1525-43A650.13
bone (os femoris), neonate N20.CNhs11195.1350-25C343.15
cecum, adult.CNhs10467.37-13H455.92
cerebellum, adult.CNhs10494.15-8B281.69
cerebellum, neonate N30.CNhs11135.1395-42I286.08
colon, adult.CNhs10468.36-18H762.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C720.49
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D120.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.62
corpora quadrigemina, adult.CNhs10501.16-22A490.32
corpus striatum, adult.CNhs10487.19-21D870.46
corpus striatum, neonate N00.CNhs11226.630-43F199.52
cortex, adult.CNhs10473.12-14D587.09
cortex, neonate N30.CNhs11107.1392-42F293.85
diencephalon, adult.CNhs10482.20-12F294.34
diencephalon, neonate N30.CNhs11201.1388-42B279.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B146.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A238.81
epididymis, adult.CNhs10490.58-23B254.84
eyeball, adult.CNhs10484.31-12G471.13
eyeball, embryo E12.CNhs11016.345-16C653.22
eyeball, embryo E14.CNhs10521.399-16E256.79
eyeball, embryo E15.CNhs10593.426-16C957.44
eyeball, embryo E17.CNhs11023.1261-18D446.27
eyeball, neonate N00.CNhs11207.633-15C650.21
eyeball, neonate N01.CNhs11140.1532-43E753.94
eyeball, neonate N02.CNhs11205.1551-44G863.15
eyeball, neonate N16.CNhs11188.777-19A259.50
forelimb, embryo E11.CNhs10596.335-25E280.41
forelimb, embryo E12.CNhs10600.359-14H268.08
forelimb, embryo E13.CNhs10589.384-1E260.35
forelimb, embryo E14.CNhs10577.413-26A862.25
forelimb, embryo E15.CNhs11007.437-20E745.32
forelimb, embryo E17.CNhs10598.1517-43C451.54
forelimb, embryo E18.CNhs11008.1520-43B548.77
gonad, embryo E13.CNhs11044.1564-45I659.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.17
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D232.17
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D532.11
heart, embryo E11.CNhs10586.331-24E954.68
heart, embryo E12.CNhs11015.353-12F553.24
heart, embryo E13.CNhs11013.376-3I954.38
heart, embryo E14.CNhs10597.403-26D455.64
heart, embryo E15.CNhs11017.431-16C854.90
heart, embryo E16.CNhs11021.457-17C647.51
heart, embryo E17.CNhs11025.479-18E554.18
heart, embryo E18.CNhs11030.1283-20G366.80
heart, neonate N00.CNhs11213.639-21E358.15
heart, neonate N03.CNhs11221.1349-25I265.49
heart, neonate N10.CNhs11118.749-24G159.26
heart, neonate N16.CNhs11209.782-15G166.64
heart, neonate N20.CNhs11127.821-26I663.74
heart, neonate N25.CNhs11196.1351-25D368.06
heart, neonate N30.CNhs11202.1390-42D269.12
hippocampus, adult.CNhs10478.13-16E885.17
hippocampus, neonate N00.CNhs11228.627-43G187.67
intestinal mucosa, adult.CNhs10506.860-29I379.63
intestine, adult.CNhs10496.178-9A355.01
intestine, embryo E12.CNhs11019.1251-16I554.60
intestine, embryo E13.CNhs11010.381-16D547.61
intestine, embryo E15.CNhs10602.976-16D852.45
intestine, embryo E16.CNhs10585.463-22H457.28
intestine, embryo E17.CNhs10582.482-18D357.82
intestine, embryo E18.CNhs10526.1289-20F772.86
intestine, neonate N00.CNhs11126.644-26D158.84
intestine, neonate N01.CNhs11192.1322-23E969.83
intestine, neonate N06.CNhs11102.688-20B873.39
intestine, neonate N07.CNhs11095.720-20F273.22
intestine, neonate N10.CNhs11098.755-23A576.62
intestine, neonate N20.CNhs11187.827-18D167.41
intestine, neonate N25.CNhs11121.1352-25E355.76
intestine, neonate N30.CNhs11131.1384-42G152.37
kidney, embryo E14.CNhs10606.411-4I970.37
kidney, embryo E15.CNhs10997.434-16F851.18
kidney, embryo E16.CNhs10584.464-22A550.72
kidney, embryo E17.CNhs11028.483-18I245.21
kidney, embryo E18.CNhs11001.1288-20C751.59
kidney, neonate N00.CNhs11214.646-21G752.04
kidney, neonate N10.CNhs11206.758-6D545.09
kidney, neonate N20.CNhs11113.832-19I157.13
kidney, neonate N25.CNhs11122.1353-25F354.16
kidney, neonate N30.CNhs11203.1385-42H162.56
liver, adult pregnant day01.CNhs10466.508-5B267.89
liver, embryo E12.CNhs10601.355-15F836.71
liver, embryo E13.CNhs10524.378-3H638.53
liver, embryo E14.CNhs10594.409-16E138.23
liver, embryo E15.CNhs10520.433-16D732.86
liver, embryo E16.CNhs10523.462-17F541.24
liver, embryo E17.CNhs10510.481-18A338.96
liver, embryo E18.CNhs10579.499-43G442.87
liver, neonate N00.CNhs11117.641-24F437.78
liver, neonate N03.CNhs11123.1345-25G242.28
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H265.12
liver, neonate N10.CNhs11115.751-24B962.72
liver, neonate N20.CNhs11220.823-25A367.44
liver, neonate N25.CNhs11198.1368-26H164.04
liver, neonate N30.CNhs11106.1382-42D192.15
lung, adult.CNhs10474.28-22B148.04
lung, embryo E12.CNhs10522.354-16G256.85
lung, embryo E14.CNhs10604.404-26F860.95
lung, embryo E15.CNhs11020.432-17C543.79
lung, embryo E16.CNhs10998.458-17B638.72
lung, embryo E17.CNhs10605.480-44A644.89
lung, embryo E18.CNhs10583.1287-20I646.42
lung, neonate N00.CNhs11224.640-42C648.39
lung, neonate N06.CNhs11212.683-20E539.88
lung, neonate N07.CNhs11111.715-19A339.86
lung, neonate N10.CNhs11219.750-23E644.33
lung, neonate N20.CNhs11109.822-18A441.62
lung, neonate N25.CNhs11119.1359-25C741.96
lung, neonate N30.CNhs11133.1394-42H244.12
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A149.76
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A172.88
mammary gland, adult lactating day02.CNhs10480.595-22B644.75
mammary gland, adult pregnant day19.CNhs10476.588-5H246.91
medulla oblongata, adult.CNhs10477.17-12C281.88
medulla oblongata, neonate N30.CNhs11200.1396-42A380.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C756.72
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C288.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E159.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E253.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E355.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D761.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D863.50
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D958.03
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D467.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D571.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D660.48
olfactory brain, adult.CNhs10489.18-22I978.72
ovary, adult.CNhs10507.91-2I743.86
ovary, embryo E18.CNhs11040.505-44H764.82
ovary, neonate N00.CNhs11217.1299-22I451.47
oviduct, adult pregnant day01.CNhs10500.988-6G647.68
pancreas, adult.CNhs10486.34-16E434.51
pancreas, embryo E14.CNhs11012.405-44F455.35
pancreas, embryo E15.CNhs11042.1556-45F255.02
pancreas, embryo E16.CNhs11003.460-26E543.94
pancreas, embryo E17.CNhs10599.1558-45G357.88
pancreas, embryo E18.CNhs10580.1535-43I743.96
pancreas, neonate N00.CNhs11105.645-26G943.42
pancreas, neonate N01.CNhs11138.1531-43D739.99
pancreas, neonate N02.CNhs11139.1539-43D841.00
pancreas, neonate N16.CNhs11136.787-43B635.71
pancreas, neonate N25.CNhs11094.1555-45E235.84
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G865.36
pituitary gland, embryo E12.CNhs11018.346-16E657.44
pituitary gland, embryo E13.CNhs11009.370-44C780.85
pituitary gland, embryo E14.CNhs11037.398-44A564.30
pituitary gland, embryo E15.CNhs10592.427-16B962.96
pituitary gland, embryo E16.CNhs11036.449-43F659.58
pituitary gland, embryo E17.CNhs11039.1265-44F563.35
pituitary gland, neonate N00.CNhs11190.1308-22E980.38
placenta, adult pregnant day10.CNhs10472.539-13I762.89
placenta, adult pregnant day17.CNhs10464.577-18G349.78
prostate, adult.CNhs10470.859-1F847.19
skin, adult.CNhs10492.30-1C356.06
skin, neonate N00.CNhs11124.650-25G446.82
skin, neonate N03.CNhs11215.662-22H352.53
skin, neonate N06.CNhs11097.693-20I556.82
skin, neonate N10.CNhs11108.762-6C453.67
small intestine, neonate N16.CNhs11114.790-21I183.66
spinal cord, adult.CNhs10505.24-13C986.59
spleen, adult.CNhs10465.25-2G228.88
spleen, embryo E16.CNhs11035.461-43C143.13
spleen, embryo E18.CNhs11011.1271-21F232.59
spleen, neonate N10.CNhs11116.752-24D127.88
spleen, neonate N20.CNhs11112.824-19H130.21
spleen, neonate N25.CNhs11099.1354-25G332.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D326.26
stomach, adult.CNhs10503.33-1H663.01
stomach, embryo E12.CNhs10588.356-43E362.79
stomach, embryo E15.CNhs10603.1252-16G849.81
stomach, embryo E16.CNhs11022.459-17D445.79
stomach, embryo E17.CNhs11006.1035-18D548.09
stomach, embryo E18.CNhs10999.1286-20C646.07
stomach, neonate N03.CNhs11193.1340-24B847.47
stomach, neonate N07.CNhs11210.718-18A945.71
stomach, neonate N25.CNhs11104.1355-25E447.90
stomach, neonate N30.CNhs11134.1386-42I158.59
submandibular gland, adult.CNhs10469.59-29C143.49
testis, adult.CNhs10504.57-7G5239.57
testis, embryo E13.CNhs11031.389-23F556.52
testis, embryo E15.CNhs11034.443-27C551.95
testis, embryo E16.CNhs11033.470-26G566.50
testis, embryo E17.CNhs11029.486-18I562.77
testis, embryo E18.CNhs11027.503-18G551.02
testis, neonate N00.CNhs11189.1300-22B744.36
testis, neonate N07.CNhs11222.726-26I451.04
testis, neonate N10.CNhs11204.763-44D944.15
testis, neonate N20.CNhs11110.839-18H377.07
testis, neonate N30.CNhs11130.1391-42E2117.80
thymus, adult.CNhs10471.38-12B535.71
thymus, embryo E14.CNhs11041.402-44I453.52
thymus, embryo E15.CNhs11005.430-45I244.68
thymus, embryo E16.CNhs11002.456-26C534.95
thymus, embryo E17.CNhs10581.478-18C144.40
thymus, embryo E18.CNhs10595.1273-19G443.91
thymus, neonate N02.CNhs11181.1541-43F839.42
thymus, neonate N03.CNhs11137.2104-43C741.80
thymus, neonate N06.CNhs11197.681-26C438.97
thymus, neonate N07.CNhs11211.713-19D340.16
thymus, neonate N10.CNhs11194.748-24E436.60
thymus, neonate N20.CNhs11186.820-7A236.06
thymus, neonate N25.CNhs11125.1362-25G734.25
thymus, neonate N30.CNhs11132.1393-42G238.45
tongue, adult.CNhs10499.32-1B458.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H361.27
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F762.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G562.62
urinary bladder, adult.CNhs10481.879-12E447.72
uterus, adult pregnant day19.CNhs10497.590-15F546.17
uterus, adult.CNhs10509.92-27E546.15
vagina, adult.CNhs10502.89-27D554.66
vesicular gland, adult.CNhs10491.51-27F847.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A188.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A281.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A391.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D780.43
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A488.38
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A584.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A689.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A788.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A890.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A992.68
whole body, embryo E11.CNhs11014.324-5I858.33
whole body, embryo E12.CNhs10587.857-27C956.66
whole body, embryo E13.CNhs10512.372-23H261.29
whole body, embryo E14.5.CNhs10578.420-27D254.70
whole body, embryo E14.CNhs10519.395-14B151.36
whole body, embryo E16.CNhs10514.453-14F251.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G554.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G557.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G551.67
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G553.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G549.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G554.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G551.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G555.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G555.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G563.35
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G558.41
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G568.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G554.81
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G554.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G551.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G554.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G546.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G550.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G550.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G552.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G554.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G556.56
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G549.03
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G547.70
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G560.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G558.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G566.70
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G559.96
whole body, embryo E17.5.CNhs10513.490-9F949.19
whole body, embryo E17.CNhs10517.475-3I570.95
whole body, embryo E18.CNhs10516.493-3B364.57
whole body, neonate N00.CNhs10525.657-19C250.92
whole body, neonate N01.CNhs10576.659-23C672.69
whole body, neonate N06.CNhs10515.692-21D163.09
whole body, neonate N10.CNhs10518.761-6B452.40





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.27e-1643
ectodermal cell9.60e-1644
neurectodermal cell9.60e-1644
CNS neuron (sensu Vertebrata)4.05e-1423
neuroblast (sensu Vertebrata)4.05e-1423
electrically responsive cell1.27e-1339
electrically active cell1.27e-1339
embryonic cell4.14e-1270
neuron6.71e-1233
neuronal stem cell6.71e-1233
neuroblast6.71e-1233
electrically signaling cell6.71e-1233

Uber anatomy
Ontology termp-valuen
nervous system2.72e-2875
central nervous system1.27e-2773
regional part of nervous system1.19e-2354
ectoderm-derived structure1.42e-2295
ectoderm1.42e-2295
presumptive ectoderm1.42e-2295
neural tube1.71e-2252
neural rod1.71e-2252
future spinal cord1.71e-2252
neural keel1.71e-2252
brain1.48e-1947
future brain1.48e-1947
neurectoderm1.53e-1964
neural plate1.53e-1964
presumptive neural plate1.53e-1964
regional part of brain3.08e-1946
structure with developmental contribution from neural crest2.08e-1892
gray matter1.62e-1734
anterior neural tube1.82e-1640
regional part of forebrain5.57e-1639
forebrain5.57e-1639
future forebrain5.57e-1639
ecto-epithelium1.33e-1573
brain grey matter7.55e-1529
regional part of telencephalon7.55e-1529
telencephalon7.55e-1529
pre-chordal neural plate2.74e-1449
tube1.29e-10114
cerebral cortex1.30e-1021
cerebral hemisphere1.30e-1021
pallium1.30e-1021
anatomical conduit7.36e-09122
regional part of cerebral cortex1.33e-0817
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