FFCP PHASE1:Hg19::chr10:15001430..15001440,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=644890 | |EntrezGene=644890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23429 | |HGNC=23429 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSS6 | |UniProt=Q5JSS6 | ||
|association_with_transcript=0bp_to_ENST00000407572,ENST00000477770,NM_001080836,uc009xjk.1_5end | |association_with_transcript=0bp_to_ENST00000407572,ENST00000477770,NM_001080836,uc009xjk.1_5end | ||
|cluster_id=chr10:15001430..15001440,+ | |||
|description=CAGE_peak_4_at_MEIG1_5end | |description=CAGE_peak_4_at_MEIG1_5end | ||
|id=chr10:15001430..15001440,+ | |id=chr10:15001430..15001440,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.95e-07!53;CL:0000051!1.95e-07!53;CL:0000624!5.15e-07!6 | |ontology_enrichment_celltype=CL:0000542!1.95e-07!53;CL:0000051!1.95e-07!53;CL:0000624!5.15e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.26e-11;5!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.94e-11,5;CL:1000746,2.03e-08,7;CL:1000612,2.03e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0003135;4.69e-19;11!UBERON:0001896;9.45e-18;3!UBERON:0005290;9.45e-18;3!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0002298;1.44e-09;6!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.81e-26,8;UBERON:0003135,4.69e-19,11;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0000991,1.61e-10,21;UBERON:0009196,1.61e-10,21;UBERON:0009117,1.61e-10,21;UBERON:0005564,1.61e-10,21;UBERON:0004176,4.33e-10,22;UBERON:0003101,4.33e-10,22;UBERON:0000079,4.33e-10,22;UBERON:0002298,1.57e-09,6;UBERON:0003886,3.61e-09,54;UBERON:0010532,2.03e-08,7;UBERON:0000074,2.03e-08,7;UBERON:0001229,2.03e-08,7;UBERON:0001230,2.03e-08,7;UBERON:0003220,2.03e-08,7;UBERON:0005749,2.03e-08,7;UBERON:0004199,2.03e-08,7;UBERON:0004209,2.03e-08,7;UBERON:0004198,2.03e-08,7;UBERON:0002553,3.25e-08,61;UBERON:0005103,1.59e-07,8;UBERON:0000083,1.59e-07,8;UBERON:0009201,1.59e-07,8;UBERON:0006553,1.59e-07,8;UBERON:0003074,1.59e-07,8;UBERON:0003060,1.59e-07,8;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9 | |||
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| ||
|short_description=p4@MEIG1 | |short_description=p4@MEIG1 | ||
}} | }} |
Latest revision as of 08:12, 17 September 2015
Short description: | p4@MEIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MEIG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407572, ENST00000477770, NM_001080836, uc009xjk.1_5end |
EntrezGene: | MEIG1 |
HGNC: | 23429 |
UniProt: | Q5JSS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.94e-11 | 5 |
glomerular cell | 2.03e-08 | 7 |
kidney corpuscule cell | 2.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 9.81e-26 | 8 |
male reproductive organ | 4.69e-19 | 11 |
medulla oblongata | 1.12e-17 | 3 |
myelencephalon | 1.12e-17 | 3 |
future myelencephalon | 1.12e-17 | 3 |
gonad | 1.61e-10 | 21 |
indifferent external genitalia | 1.61e-10 | 21 |
indifferent gonad | 1.61e-10 | 21 |
gonad primordium | 1.61e-10 | 21 |
external genitalia | 4.33e-10 | 22 |
male organism | 4.33e-10 | 22 |
male reproductive system | 4.33e-10 | 22 |
brainstem | 1.57e-09 | 6 |
body cavity precursor | 3.61e-09 | 54 |
primitive nephron | 2.03e-08 | 7 |
renal glomerulus | 2.03e-08 | 7 |
renal corpuscle | 2.03e-08 | 7 |
glomerular capsule | 2.03e-08 | 7 |
metanephric mesenchyme | 2.03e-08 | 7 |
glomerular tuft | 2.03e-08 | 7 |
S-shaped body | 2.03e-08 | 7 |
renal vesicle | 2.03e-08 | 7 |
comma-shaped body | 2.03e-08 | 7 |
anatomical cavity | 3.25e-08 | 61 |
mesonephric epithelium | 1.59e-07 | 8 |
mesonephric tubule | 1.59e-07 | 8 |
nephric duct | 1.59e-07 | 8 |
renal duct | 1.59e-07 | 8 |
mesonephric duct | 1.59e-07 | 8 |
pronephric duct | 1.59e-07 | 8 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |