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FFCP PHASE1:Mm9::chr11:74739160..74739218,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27364
|EntrezGene=27364
|HGNC=
|HGNC=
|MCL_coexpression_id=456
|TSSclassifier=NA
|UniProt=Q9QZX7,A8Y5D6
|UniProt=Q9QZX7,A8Y5D6
|association_with_transcript=0bp_to_ENSMUST00000071240,ENSMUST00000123855,ENSMUST00000127499,ENSMUST00000128556,ENSMUST00000135587,ENSMUST00000138612,ENSMUST00000147817,uc007kct.2,uc007kcx.1,uc007kcy.1_5end
|association_with_transcript=0bp_to_ENSMUST00000071240,ENSMUST00000123855,ENSMUST00000127499,ENSMUST00000128556,ENSMUST00000135587,ENSMUST00000138612,ENSMUST00000147817,uc007kct.2,uc007kcx.1,uc007kcy.1_5end
|cluster_id=chr11:74739160..74739218,-
|description=CAGE_peak_1_at_Srr_5end
|description=CAGE_peak_1_at_Srr_5end
|id=chr11:74739160..74739218,-
|id=chr11:74739160..74739218,-
|ontology_enrichment_celltype=CL:0000117!8.18e-09!23;CL:0000337!8.18e-09!23;CL:0000393!9.32e-07!39;CL:0000211!9.32e-07!39
|ontology_enrichment_celltype=CL:0000117!8.18e-09!23;CL:0000337!8.18e-09!23;CL:0000393!9.32e-07!39;CL:0000211!9.32e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,8.18e-09,23;CL:0000337,8.18e-09,23;CL:0000393,9.32e-07,39;CL:0000211,9.32e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!3.83e-17!122;UBERON:0000025!4.85e-17!114;UBERON:0001049!9.20e-17!52;UBERON:0005068!9.20e-17!52;UBERON:0006241!9.20e-17!52;UBERON:0007135!9.20e-17!52;UBERON:0000033!3.95e-16!63;UBERON:0000955!4.90e-16!50;UBERON:0006238!4.90e-16!50;UBERON:0002020!7.66e-16!34;UBERON:0002616!1.97e-15!49;UBERON:0002346!4.65e-15!71;UBERON:0003075!4.65e-15!71;UBERON:0007284!4.65e-15!71;UBERON:0001017!5.66e-15!73;UBERON:0005743!5.66e-15!73;UBERON:0003056!4.94e-14!49;UBERON:0000073!9.07e-14!75;UBERON:0001016!9.07e-14!75;UBERON:0003080!9.09e-14!40;UBERON:0002791!9.27e-14!29;UBERON:0003528!9.27e-14!29;UBERON:0001893!9.27e-14!29;UBERON:0002780!2.67e-13!39;UBERON:0001890!2.67e-13!39;UBERON:0006240!2.67e-13!39;UBERON:0004121!1.13e-11!102;UBERON:0000924!1.13e-11!102;UBERON:0006601!1.13e-11!102;UBERON:0000956!3.58e-10!21;UBERON:0001869!3.58e-10!21;UBERON:0000203!3.58e-10!21;UBERON:0002619!4.25e-09!17;UBERON:0002021!4.01e-08!10;UBERON:0000411!4.01e-08!10;UBERON:0001950!4.01e-08!10;UBERON:0000477!8.41e-08!154;UBERON:0000468!2.53e-07!333;UBERON:0007811!6.30e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.30e-17,54;UBERON:0004111,3.83e-17,122;UBERON:0000025,4.85e-17,114;UBERON:0001049,9.20e-17,52;UBERON:0005068,9.20e-17,52;UBERON:0006241,9.20e-17,52;UBERON:0007135,9.20e-17,52;UBERON:0002346,3.11e-16,64;UBERON:0003075,3.11e-16,64;UBERON:0007284,3.11e-16,64;UBERON:0010314,5.39e-16,92;UBERON:0002020,7.66e-16,34;UBERON:0001017,5.66e-15,73;UBERON:0000955,1.09e-14,47;UBERON:0006238,1.09e-14,47;UBERON:0002616,4.26e-14,46;UBERON:0003056,4.94e-14,49;UBERON:0001016,9.07e-14,75;UBERON:0003080,9.09e-14,40;UBERON:0003528,9.27e-14,29;UBERON:0002791,9.27e-14,29;UBERON:0001893,9.27e-14,29;UBERON:0002780,2.67e-13,39;UBERON:0001890,2.67e-13,39;UBERON:0006240,2.67e-13,39;UBERON:0010371,6.04e-13,73;UBERON:0004121,3.50e-12,95;UBERON:0000924,3.50e-12,95;UBERON:0006601,3.50e-12,95;UBERON:0000956,3.58e-10,21;UBERON:0001869,3.58e-10,21;UBERON:0000203,3.58e-10,21;UBERON:0002619,4.25e-09,17;UBERON:0002021,4.01e-08,10;UBERON:0000411,4.01e-08,10;UBERON:0001950,4.01e-08,10
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6,14.2323626988794,13.608672943547,10.245326504709,11.3548533148012,10.519419018016,13.2245529160537,15.4436005770577,27.0895294179847,19.2615187056947,19.1655599152625,14.6526215123099,10.4238848987971,14.7782903141476,15.2408591703723,15.8818757961331,14.2002258761362,19.9212708811244,14.2608708418967,13.0455425246043,17.2818003754719,10.1123558601017,8.71718425747706,8.01145465885653,9.22437843142345,7.51912121803422,11.1261558677508,9.13485416351763,11.9628517011408,10.2985778947111,11.12619377163,10.5867494393683,10.0381617161945,12.5075394132428,17.7652891315985,12.4701710988366,4.21773311410723,7.80510552502439,8.22634620183984,20.4780969674122,16.1406928888016,14.6521299413812,10.2896821957952,15.0471631210609,96.5725650875184,98.969925849043,86.5072225293489,92.6288652832476,76.7292422143119,80.0717531233083,99.2283075340755,78.8062105642386,79.2999215722358,78.6995673862766,11.2090335390911,15.9609949360412,12.9757540373142,13.3708694387562,15.9306003597267,17.4651333027513,21.7801793245583,16.2767695218726,17.6505565275498,19.96307972934,17.2365923925363,19.6171395041519,18.6346599865066,18.7593696546267,21.825478203133,17.1465728861907,16.2238056322798,18.1334667235883,21.4284668417719,22.227036940294,18.8578088811978,15.0854435235437,17.8827142460491,18.7496877455704,18.3513291809895,16.6690777546603,15.9147336399312,17.6256706663355,19.4199882799582,14.5896990631012,17.5579826823778,19.0113650984837,13.0953933814301,16.8881156892703,15.2396222675102,20.4844673909116,22.4574344107592,18.693781702202,15.4943548975763,17.8679049486808,17.8538233427725
|phase1_expression=17.2960754873177,22.6834014965585,14.5599756604652,18.7527811010235,18.0322462780685,6.04365378882803,4.90586545250604,4.00282302668886,1.267098499365,0.468129052643987,3.5955773327356,3.35043067780413,5.82082481766099,3.93391810885488,4.33042690360362,3.03712901084739,3.49780939064073,6.46697438984387,6.7186072466812,4.66828616977833,28.2343723301552,9.13476751048145,4.96279599363977,14.3993180514066,11.0116454912242,18.3754228516806,11.1998119001359,14.0056301245828,16.7220609121609,18.146169342715,9.5344119581781,4.44521471421742,4.92051830067656,15.8481681015439,3.75507105676657,6.15068187826422,3.67504841272264,4.60384793810598,1.5626706890476,2.09409497589519,0.588231488031014,1.36609096991689,1.94204141212461,20.8988717839458,18.6533553443907,13.2153661556411,9.38869613217647,9.81113203712009,15.378032791413,16.9154012194627,9.37909024889929,15.8127820801469,2.34895648480831,3.62681071005672,3.6970317905671,16.7218633423366,23.4957420749781,19.0798674142654,23.8733423814325,21.6886301501533,19.6487735086916,7.79342423759004,9.78224275722253,2.6996991518442,2.96659908770092,1.4209602298922,4.49400165777607,11.5265491596466,20.3231640124616,19.5758610580951,22.2944459032465,23.7090317055157,26.5042249141936,22.6607978547665,19.1690942036473,28.4957823849107,23.1243350098716,34.6032686210859,35.7903222487047,25.9815986828482,23.3293491186145,31.7757156039624,25.1264699101243,39.9561453122493,35.7547899797736,31.2306300602088,33.8844600301865,28.3327157654457,4.54357159999104,10.58001841495,15.9425468785923,40.4399222181252,31.2786813505565,76.0981500209322,71.4754059192436,58.691522209751,34.8302161926745,12.1005529030421,8.3131521472918,11.6602059588412,17.182897212755,17.9657068380045,15.2883143823987,21.3320010945999,2.59789249213457,2.28023878927589,8.08839112023653,34.1409800359989,15.7952109024775,24.3445108066313,10.7560902595004,10.3518262626128,14.0675453326196,14.4693734930518,14.5809996848274,21.7403203000339,20.2699873542187,42.512210934454,2.65383165584962,15.3678507450039,10.3795513676385,9.21262980956922,11.1835056730873,30.7419836862124,34.7681533310335,17.6265368093928,2.87556298814209,0.599902730993408,3.04968544975355,33.8526845054899,55.8150735438724,36.8167251690693,81.6974304903699,80.2946536017238,39.687516510876,42.3449696606847,14.2575109390443,15.5508713262616,27.7995034277042,25.4634645622634,12.8819238533077,14.0240283704418,14.4049703844279,17.6324636867787,17.2812707844373,22.2917873295639,26.4238863258435,32.0792179716379,7.32931175971664,14.3720620927543,17.067259043903,13.8093311429372,14.4584569597311,18.4573648256748,15.6394423670037,12.5391588095651,1.40442637462647,2.05878325691772,3.12579849335152,11.3919174894526,14.3060896588469,15.8454614085693,13.0209604571866,15.7411385397923,15.7352455145126,16.509910077279,20.1205051049714,15.4130251924664,21.5573403386659,20.8492679380451,23.9963676255733,21.6375981389492,19.7595103761946,26.3044580770329,78.0175709172912,45.586743284023,41.6327666559585,24.0650015663825,10.8777007772969,13.9342003116263,9.92279452180119,14.722897297504,14.2321948060717,21.1150444984941,20.404749646414,17.1286912912971,22.368833583224,18.3039954277859,20.6661932346267,18.8752075817387,19.8847005884719,25.6892242498134,11.0007382552787,12.1103423366313,9.01661885384643,12.0154283428735,12.9948166402309,16.3416460344442,29.4049897627796,46.9400270575135,49.2976005421917,46.6441279624406,65.2195779591728,5.6727335943472,5.70021085828289,6.07127703439105,4.26006254915856,5.54707467430559,5.0925170356284,5.17853047411459,5.67473293712624,15.6500005517206,18.6898668485561,19.3513292787622,22.7787501373629,49.758038955581,55.075005951227,58.8581096063308,18.6600722068271,13.4538902357044,8.47417877498535,14.9375675482166,13.6120344007331,15.7455881995307,14.0445748122748,14.6350235893349,20.0196633014863,15.723992965063,21.8453033060757,17.2056480451525,18.4772930596508,16.9239398540369,9.04747703635634,8.15858525728064,11.3105782794378,10.2096596132751,31.4679156376072,33.8741774251467,10.9836413402373,21.9649706667804,16.0909191902291,11.7131623288992,14.0025208526319,15.2940030689633,12.9223230967789,15.286132662597,12.1443210502468,14.028281179743,18.1832377855401,59.4444435380343,16.6069899693674,10.8620018237026,12.7051828295789,17.4868330350888,11.9470624505967,6.5550771761845,6.04647113929502,9.8074641473067,10.335566250827,10.7602301780375,12.9214146584111,14.1778154496227,11.4079161083111,9.16506598013866,10.5418608574999,10.3135543248187,27.235168460303,11.8840322060665,12.1597162755789,14.5749183821483,21.8128487379996,16.5883000369926,23.6950589667054,11.5696680663548,11.7335854031855,26.2671767871137,21.1707262132763,12.2015827176695,10.8181165886257,14.0529115082603,10.3853939282729,7.71462228801788,22.4440244204985,35.9725085900389,5.63873906632914,12.1768252098301,9.63011542322501,5.83942216714542,6.83471138605126,10.2950177942935,5.77926661979108,4.19854356970974,4.14599921413271,21.0027535963325,9.49007980743406,14.2323626988794,13.608672943547,10.245326504709,11.3548533148012,10.519419018016,13.2245529160537,15.4436005770577,27.0895294179847,19.2615187056947,19.1655599152625,14.6526215123099,10.4238848987971,14.7782903141476,15.2408591703723,15.8818757961331,14.2002258761362,19.9212708811244,14.2608708418967,13.0455425246043,17.2818003754719,10.1123558601017,8.71718425747706,8.01145465885653,9.22437843142345,7.51912121803422,11.1261558677508,9.13485416351763,11.9628517011408,10.2985778947111,11.12619377163,10.5867494393683,10.0381617161945,12.5075394132428,17.7652891315985,12.4701710988366,4.21773311410723,7.80510552502439,8.22634620183984,20.4780969674122,16.1406928888016,14.6521299413812,10.2896821957952,15.0471631210609,96.5725650875184,98.969925849043,86.5072225293489,92.6288652832476,76.7292422143119,80.0717531233083,99.2283075340755,78.8062105642386,79.2999215722358,78.6995673862766,11.2090335390911,15.9609949360412,12.9757540373142,13.3708694387562,15.9306003597267,17.4651333027513,21.7801793245583,16.2767695218726,17.6505565275498,19.96307972934,17.2365923925363,19.6171395041519,18.6346599865066,18.7593696546267,21.825478203133,17.1465728861907,16.2238056322798,18.1334667235883,21.4284668417719,22.227036940294,18.8578088811978,15.0854435235437,17.8827142460491,18.7496877455704,18.3513291809895,16.6690777546603,15.9147336399312,17.6256706663355,19.4199882799582,14.5896990631012,17.5579826823778,19.0113650984837,13.0953933814301,16.8881156892703,15.2396222675102,20.4844673909116,22.4574344107592,18.693781702202,15.4943548975763,17.8679049486808,17.8538233427725
|short_description=p1@Srr
|short_description=p1@Srr
}}
}}

Latest revision as of 15:59, 25 September 2015

Short description:p1@Srr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Srr_5end
Coexpression cluster:MCL_coexpression_mm9:456
Association with transcript: 0bp_to_ENSMUST00000071240, ENSMUST00000123855, ENSMUST00000127499, ENSMUST00000128556, ENSMUST00000135587, ENSMUST00000138612, ENSMUST00000147817, uc007kct.2, uc007kcx.1, uc007kcy.1_5end
EntrezGene:Srr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Srr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H918.38
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I214.01
Ileum epithelium, pool1.CNhs13199.10252-104B916.72
Ileum epithelium, pool2.CNhs13232.10253-104C118.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.50
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.08
Mouse Granule cells, donor1.CNhs12131.11713-123C323.87
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.29
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.33
Mouse Schwann, donor1.CNhs12507.11728-123D94.54
Mouse Schwann, donor2.CNhs12573.11746-123F910.58
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F740.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C431.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C876.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F471.48
Mouse hepatocyte, donor8.CNhs13091.11824-124F658.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.14
accessory axillary lymph node, adult.CNhs10475.1063-29H915.80
adrenal gland, adult.CNhs10508.49-24D724.34
adrenal gland, embryo E14.CNhs11038.406-44C510.76
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I114.07
adrenal gland, embryo E18.CNhs11026.1262-18F514.47
adrenal gland, neonate N00.CNhs11191.1311-23C114.58
adrenal gland, neonate N25.CNhs11223.1377-27I321.74
amnion, adult pregnant day17.5.CNhs10488.583-22A820.27
aorta, adult.CNhs10498.46-23H142.51
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F515.37
bone (os femoris), neonate N16.CNhs11225.1525-43A610.38
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B230.74
cerebellum, neonate N30.CNhs11135.1395-42I234.77
colon, adult.CNhs10468.36-18H717.63
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A433.85
corpus striatum, adult.CNhs10487.19-21D855.82
corpus striatum, neonate N00.CNhs11226.630-43F136.82
cortex, adult.CNhs10473.12-14D581.70
cortex, neonate N30.CNhs11107.1392-42F280.29
diencephalon, adult.CNhs10482.20-12F239.69
diencephalon, neonate N30.CNhs11201.1388-42B242.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.55
epididymis, adult.CNhs10490.58-23B227.80
eyeball, adult.CNhs10484.31-12G425.46
eyeball, embryo E12.CNhs11016.345-16C612.88
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C914.40
eyeball, embryo E17.CNhs11023.1261-18D417.63
eyeball, neonate N00.CNhs11207.633-15C617.28
eyeball, neonate N01.CNhs11140.1532-43E722.29
eyeball, neonate N02.CNhs11205.1551-44G826.42
eyeball, neonate N16.CNhs11188.777-19A232.08
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H214.37
forelimb, embryo E13.CNhs10589.384-1E217.07
forelimb, embryo E14.CNhs10577.413-26A813.81
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B515.64
gonad, embryo E13.CNhs11044.1564-45I612.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F514.31
heart, embryo E13.CNhs11013.376-3I915.85
heart, embryo E14.CNhs10597.403-26D413.02
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C615.74
heart, embryo E17.CNhs11025.479-18E516.51
heart, embryo E18.CNhs11030.1283-20G320.12
heart, neonate N00.CNhs11213.639-21E315.41
heart, neonate N03.CNhs11221.1349-25I221.56
heart, neonate N10.CNhs11118.749-24G120.85
heart, neonate N16.CNhs11209.782-15G124.00
heart, neonate N20.CNhs11127.821-26I621.64
heart, neonate N25.CNhs11196.1351-25D319.76
heart, neonate N30.CNhs11202.1390-42D226.30
hippocampus, adult.CNhs10478.13-16E878.02
hippocampus, neonate N00.CNhs11228.627-43G145.59
intestinal mucosa, adult.CNhs10506.860-29I341.63
intestine, adult.CNhs10496.178-9A324.07
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D89.92
intestine, embryo E16.CNhs10585.463-22H414.72
intestine, embryo E17.CNhs10582.482-18D314.23
intestine, embryo E18.CNhs10526.1289-20F721.12
intestine, neonate N00.CNhs11126.644-26D120.40
intestine, neonate N01.CNhs11192.1322-23E917.13
intestine, neonate N06.CNhs11102.688-20B822.37
intestine, neonate N07.CNhs11095.720-20F218.30
intestine, neonate N10.CNhs11098.755-23A520.67
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E319.88
intestine, neonate N30.CNhs11131.1384-42G125.69
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F812.11
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C712.99
kidney, neonate N00.CNhs11214.646-21G716.34
kidney, neonate N10.CNhs11206.758-6D529.40
kidney, neonate N20.CNhs11113.832-19I146.94
kidney, neonate N25.CNhs11122.1353-25F349.30
kidney, neonate N30.CNhs11203.1385-42H146.64
liver, adult pregnant day01.CNhs10466.508-5B265.22
liver, embryo E12.CNhs10601.355-15F85.67
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G215.65
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B922.78
liver, neonate N20.CNhs11220.823-25A349.76
liver, neonate N25.CNhs11198.1368-26H155.08
liver, neonate N30.CNhs11106.1382-42D158.86
lung, adult.CNhs10474.28-22B118.66
lung, embryo E12.CNhs10522.354-16G213.45
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C514.94
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I614.04
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E520.02
lung, neonate N07.CNhs11111.715-19A315.72
lung, neonate N10.CNhs11219.750-23E621.85
lung, neonate N20.CNhs11109.822-18A417.21
lung, neonate N25.CNhs11119.1359-25C718.48
lung, neonate N30.CNhs11133.1394-42H216.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B611.31
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C231.47
medulla oblongata, neonate N30.CNhs11200.1396-42A333.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.03
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I959.44
ovary, adult.CNhs10507.91-2I716.61
ovary, embryo E18.CNhs11040.505-44H710.86
ovary, neonate N00.CNhs11217.1299-22I412.71
oviduct, adult pregnant day01.CNhs10500.988-6G617.49
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E59.81
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I710.76
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D714.18
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G827.24
pituitary gland, embryo E12.CNhs11018.346-16E611.88
pituitary gland, embryo E13.CNhs11009.370-44C712.16
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B921.81
pituitary gland, embryo E16.CNhs11036.449-43F616.59
pituitary gland, embryo E17.CNhs11039.1265-44F523.70
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G326.27
prostate, adult.CNhs10470.859-1F821.17
skin, adult.CNhs10492.30-1C312.20
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H314.05
skin, neonate N06.CNhs11097.693-20I510.39
skin, neonate N10.CNhs11108.762-6C47.71
small intestine, neonate N16.CNhs11114.790-21I122.44
spinal cord, adult.CNhs10505.24-13C935.97
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C112.18
spleen, embryo E18.CNhs11011.1271-21F29.63
spleen, neonate N10.CNhs11116.752-24D15.84
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G310.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E39.49
stomach, embryo E15.CNhs10603.1252-16G814.23
stomach, embryo E16.CNhs11022.459-17D413.61
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C611.35
stomach, neonate N03.CNhs11193.1340-24B810.52
stomach, neonate N07.CNhs11210.718-18A913.22
stomach, neonate N25.CNhs11104.1355-25E415.44
stomach, neonate N30.CNhs11134.1386-42I127.09
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G519.17
testis, embryo E13.CNhs11031.389-23F514.65
testis, embryo E15.CNhs11034.443-27C510.42
testis, embryo E16.CNhs11033.470-26G514.78
testis, embryo E17.CNhs11029.486-18I515.24
testis, embryo E18.CNhs11027.503-18G515.88
testis, neonate N00.CNhs11189.1300-22B714.20
testis, neonate N07.CNhs11222.726-26I419.92
testis, neonate N10.CNhs11204.763-44D914.26
testis, neonate N20.CNhs11110.839-18H313.05
testis, neonate N30.CNhs11130.1391-42E217.28
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I28.01
thymus, embryo E16.CNhs11002.456-26C59.22
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G411.13
thymus, neonate N02.CNhs11181.1541-43F89.13
thymus, neonate N03.CNhs11137.2104-43C711.96
thymus, neonate N06.CNhs11197.681-26C410.30
thymus, neonate N07.CNhs11211.713-19D311.13
thymus, neonate N10.CNhs11194.748-24E410.59
thymus, neonate N20.CNhs11186.820-7A210.04
thymus, neonate N25.CNhs11125.1362-25G712.51
thymus, neonate N30.CNhs11132.1393-42G217.77
tongue, adult.CNhs10499.32-1B412.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.23
urinary bladder, adult.CNhs10481.879-12E420.48
uterus, adult pregnant day19.CNhs10497.590-15F516.14
uterus, adult.CNhs10509.92-27E514.65
vagina, adult.CNhs10502.89-27D510.29
vesicular gland, adult.CNhs10491.51-27F815.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A196.57
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A298.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A386.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D792.63
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A476.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A580.07
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A699.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A778.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A879.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A978.70
whole body, embryo E11.CNhs11014.324-5I811.21
whole body, embryo E12.CNhs10587.857-27C915.96
whole body, embryo E13.CNhs10512.372-23H212.98
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B115.93
whole body, embryo E16.CNhs10514.453-14F217.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.96
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.23
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.75
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.89
whole body, embryo E17.5.CNhs10513.490-9F915.24
whole body, embryo E17.CNhs10517.475-3I520.48
whole body, embryo E18.CNhs10516.493-3B322.46
whole body, neonate N00.CNhs10525.657-19C218.69
whole body, neonate N01.CNhs10576.659-23C615.49
whole body, neonate N06.CNhs10515.692-21D117.87
whole body, neonate N10.CNhs10518.761-6B417.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.18e-0923
neuroblast (sensu Vertebrata)8.18e-0923
electrically responsive cell9.32e-0739
electrically active cell9.32e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.30e-1754
anatomical conduit3.83e-17122
tube4.85e-17114
neural tube9.20e-1752
neural rod9.20e-1752
future spinal cord9.20e-1752
neural keel9.20e-1752
neurectoderm3.11e-1664
neural plate3.11e-1664
presumptive neural plate3.11e-1664
structure with developmental contribution from neural crest5.39e-1692
gray matter7.66e-1634
central nervous system5.66e-1573
brain1.09e-1447
future brain1.09e-1447
regional part of brain4.26e-1446
pre-chordal neural plate4.94e-1449
nervous system9.07e-1475
anterior neural tube9.09e-1440
brain grey matter9.27e-1429
regional part of telencephalon9.27e-1429
telencephalon9.27e-1429
regional part of forebrain2.67e-1339
forebrain2.67e-1339
future forebrain2.67e-1339
ecto-epithelium6.04e-1373
ectoderm-derived structure3.50e-1295
ectoderm3.50e-1295
presumptive ectoderm3.50e-1295
cerebral cortex3.58e-1021
cerebral hemisphere3.58e-1021
pallium3.58e-1021
regional part of cerebral cortex4.25e-0917
occipital lobe4.01e-0810
visual cortex4.01e-0810
neocortex4.01e-0810
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