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FFCP PHASE1:Mm9::chr19:43514894..43514937,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=83674
|EntrezGene=83674
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q0GA42,E9PWQ8
|UniProt=Q0GA42,E9PWQ8
|association_with_transcript=0bp_to_ENSMUST00000165311,ENSMUST00000167527,NM_031396,uc008hoh.2,uc012bma.1_5end
|association_with_transcript=0bp_to_ENSMUST00000165311,ENSMUST00000167527,NM_031396,uc008hoh.2,uc012bma.1_5end
|cluster_id=chr19:43514894..43514937,+
|description=CAGE_peak_1_at_Cnnm1_5end
|description=CAGE_peak_1_at_Cnnm1_5end
|id=chr19:43514894..43514937,+
|id=chr19:43514894..43514937,+
|ontology_enrichment_celltype=CL:0000117!4.42e-09!23;CL:0000337!4.42e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.01e-11,23;CL:0000337,3.01e-11,23;CL:0000540,5.13e-07,33;CL:0000047,5.13e-07,33;CL:0000031,5.13e-07,33;CL:0000404,5.13e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.73e-17!52;UBERON:0005068!1.73e-17!52;UBERON:0006241!1.73e-17!52;UBERON:0007135!1.73e-17!52;UBERON:0000033!4.83e-17!63;UBERON:0002346!5.77e-17!71;UBERON:0003075!5.77e-17!71;UBERON:0007284!5.77e-17!71;UBERON:0000955!1.04e-16!50;UBERON:0006238!1.04e-16!50;UBERON:0002616!4.60e-16!49;UBERON:0001017!2.84e-15!73;UBERON:0005743!2.84e-15!73;UBERON:0002020!3.35e-15!34;UBERON:0000073!8.67e-15!75;UBERON:0001016!8.67e-15!75;UBERON:0003056!4.86e-14!49;UBERON:0000153!1.95e-13!94;UBERON:0003080!6.21e-13!40;UBERON:0007811!6.80e-13!86;UBERON:0004121!1.11e-12!102;UBERON:0000924!1.11e-12!102;UBERON:0006601!1.11e-12!102;UBERON:0002791!1.47e-12!29;UBERON:0003528!1.47e-12!29;UBERON:0001893!1.47e-12!29;UBERON:0002780!2.68e-12!39;UBERON:0001890!2.68e-12!39;UBERON:0006240!2.68e-12!39;UBERON:0000956!1.14e-08!21;UBERON:0001869!1.14e-08!21;UBERON:0000203!1.14e-08!21;UBERON:0002021!5.03e-08!10;UBERON:0000411!5.03e-08!10;UBERON:0001950!5.03e-08!10;UBERON:0002619!1.40e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.21e-21,54;UBERON:0001049,3.56e-19,52;UBERON:0005068,3.56e-19,52;UBERON:0006241,3.56e-19,52;UBERON:0007135,3.56e-19,52;UBERON:0002020,7.09e-19,34;UBERON:0002346,1.41e-17,64;UBERON:0003075,1.41e-17,64;UBERON:0007284,1.41e-17,64;UBERON:0001017,1.72e-17,73;UBERON:0001016,1.67e-16,75;UBERON:0000955,7.19e-16,47;UBERON:0006238,7.19e-16,47;UBERON:0003528,2.14e-15,29;UBERON:0002791,2.14e-15,29;UBERON:0001893,2.14e-15,29;UBERON:0002616,4.29e-15,46;UBERON:0010371,4.73e-14,73;UBERON:0004121,1.09e-13,95;UBERON:0000924,1.09e-13,95;UBERON:0006601,1.09e-13,95;UBERON:0003080,2.46e-13,40;UBERON:0003056,1.12e-12,49;UBERON:0002780,1.48e-12,39;UBERON:0001890,1.48e-12,39;UBERON:0006240,1.48e-12,39;UBERON:0000956,2.72e-10,21;UBERON:0001869,2.72e-10,21;UBERON:0000203,2.72e-10,21;UBERON:0002021,3.90e-10,10;UBERON:0000411,3.90e-10,10;UBERON:0001950,3.90e-10,10;UBERON:0002619,7.75e-09,17;UBERON:0010314,8.89e-08,92;UBERON:0003076,9.38e-07,12;UBERON:0003057,9.38e-07,12
|phase1_expression=0,0,0.454999239389536,0,0,2.01455126294268,2.10251376535973,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,10.8004978491859,0,0,2.55987876469451,3.67054849707472,1.72269589234506,0.86152399231815,0.430942465371778,0.380046838912748,1.26015064879965,1.10865255327652,3.81018404075779,4.30545351309199,0,4.33277429626912,2.99222361645286,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.439372365468944,1.74986909166855,0,0,0,0,0,0,0,0,2.63011399117477,3.70293685490423,3.1691570175309,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,1.14058573539325,2.16009501330705,1.26194976810829,8.2838785477103,5.96345060569357,1.71487118900936,0.766763768145891,0,42.9451935897616,27.0697156740598,25.1914714540239,2.63772575460388,2.92760459527711,3.12548022334056,25.1264699101243,19.6966913511088,24.90611438762,8.83885756421003,7.68807076315156,6.33758115806022,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0,0,0.448026887097336,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0.693941307064543,0.608930956624282,0.461230994512117,0.452167921657868,0.352766121407114,0.125666591329675,0,0,0,0.647067399789637,0.883366073841574,0.484875253135222,3.72783522436244,60.6056249813903,69.5363066620671,0.510914110417183,0.11981512450592,0,0,39.8443100816828,34.312545211397,4.52355667606312,31.9836749153789,28.1287003063364,27.2202338373024,30.0146336675352,0.305518091550949,1.11966273549084,0,3.36706969418358,1.17108398666433,0.689706313300419,0.720248519221397,0.753524089178575,1.29269348387523,0.896796041993948,1.03071897015702,6.46758426847539,0.431135985865684,1.13463648100692,2.63926686245923,1.7535658594206,1.11218899690239,0.696504333044333,1.23469281844766,0,0,0,0,0.414251545071004,0.469052119962192,0,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,38.2727706386712,3.60166143327496,0.330418782983798,0.528901133327089,0.639864751605702,0.696710015581316,1.15980715189884,0.605050573870028,1.33426826306922,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,1.1948476395262,0,0.114248512609729,0,1.22190796707189,1.16371492300575,2.10407459670956,3.85742876457969,5.16635517928608,7.22194148070324,10.8589504251184,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,1.4473305640901,0,0.568474235311454,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,25.8486449880345,19.6915633474901,0,0,0.94652465824877,1.56175497718655,0.430846795465598,0,0.668396022247182,0,0,0.292255857911312,1.58115111178609,36.3093087556642,3.54850213020672,0.534196811001766,0.325773918707152,0,5.30980553359851,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,1.03135543248187,1.02131881726136,0.540183282093931,0.258717367565509,1.07168517515796,0.532020700926821,0.356737635204141,0.987294123612726,0.608929898229199,0,0,0.441056796109924,0.32977250588296,1.93757312035087,0.482503399425247,0,0,0.582961673259701,26.3303928854924,0.170870880797853,0,0.555583582109135,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0.954670618015114,1.10717597753397,0.406638934253697,0.86404272657441,0.836353184057875,0.87345025498471,0.134864346384821,0.41326727862668,0,1.29614973291793,0.621339313086926,3.94585057078933,0,0.165458490457098,0.583353565032143,0.516639293910924,0.506868376472335,0.704143431874524,0.651021924219751,0.104859344425711,1.44950472495604,3.16833006883652,1.58005560314089,0.202725215290164,0,0.389762468933385,2.14832034800978,1.78813219303138,1.44234539423963,1.47689527174577,1.21159739937777,1.67654974641,2.62148081355785,1.46186821109629,2.02044867444692,0.584384510907845,1.81384306892169,0,0,0,1.54551675225752,0.187682475451182,0,0,1.00314420807073,27.6728402882363,27.6195141904306,27.498984645091,36.9484342038928,38.364621107156,46.0790277407717,46.5765525159946,36.9263386643861,42.5953864445152,44.0096264989047,0.207574695168353,0.798049746802062,0.512200817262403,0.972426868273176,0.628839487883947,0.919217542250071,1.55572709461131,2.67845574410562,1.28367683836726,0.758091635291392,1.01391719956096,1.13175804831646,0.842773567228942,1.92075457214608,0.918967503289812,1.90517476513229,1.97003354106254,1.73618298417335,1.64834360321323,1.47198920134397,1.02860775715625,0.70990322463735,0.476872379894642,2.0348498328526,1.2234219453993,1.18460451048347,1.28049581010941,1.05227884575137,0.814824683075171,1.68342681497322,1.42362021749009,2.1670986122624,1.22769312950907,1.70430525304563,1.73615949883027,3.49734809113124,0.467863216890817,0.429742108096597,1.14772999241306,0.661774257358546,0.695603506861264
|phase1_expression=0,0,0.454999239389536,0,0,2.01455126294268,2.10251376535973,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,10.8004978491859,0,0,2.55987876469451,3.67054849707472,1.72269589234506,0.86152399231815,0.430942465371778,0.380046838912748,1.26015064879965,1.10865255327652,3.81018404075779,4.30545351309199,0,4.33277429626912,2.99222361645286,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.439372365468944,1.74986909166855,0,0,0,0,0,0,0,0,2.63011399117477,3.70293685490423,3.1691570175309,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,1.14058573539325,2.16009501330705,1.26194976810829,8.2838785477103,5.96345060569357,1.71487118900936,0.766763768145891,0,42.9451935897616,27.0697156740598,25.1914714540239,2.63772575460388,2.92760459527711,3.12548022334056,25.1264699101243,19.6966913511088,24.90611438762,8.83885756421003,7.68807076315156,6.33758115806022,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0,0,0.448026887097336,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0.693941307064543,0.608930956624282,0.461230994512117,0.452167921657868,0.352766121407114,0.125666591329675,0,0,0,0.647067399789637,0.883366073841574,0.484875253135222,3.72783522436244,60.6056249813903,69.5363066620671,0.510914110417183,0.11981512450592,0,0,39.8443100816828,34.312545211397,4.52355667606312,31.9836749153789,28.1287003063364,27.2202338373024,30.0146336675352,0.305518091550949,1.11966273549084,0,3.36706969418358,1.17108398666433,0.689706313300419,0.720248519221397,0.753524089178575,1.29269348387523,0.896796041993948,1.03071897015702,6.46758426847539,0.431135985865684,1.13463648100692,2.63926686245923,1.7535658594206,1.11218899690239,0.696504333044333,1.23469281844766,0,0,0,0,0.414251545071004,0.469052119962192,0,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,38.2727706386712,3.60166143327496,0.330418782983798,0.528901133327089,0.639864751605702,0.696710015581316,1.15980715189884,0.605050573870028,1.33426826306922,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,1.79763881730844,0.216138049874694,1.1948476395262,0,0.114248512609729,0,1.22190796707189,1.16371492300575,2.10407459670956,3.85742876457969,5.16635517928608,7.22194148070324,10.8589504251184,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,1.4473305640901,0,0.568474235311454,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,25.8486449880345,19.6915633474901,0,0,0.94652465824877,1.56175497718655,0.430846795465598,0,0.668396022247182,0,0,0.292255857911312,1.58115111178609,36.3093087556642,3.54850213020672,0.534196811001766,0.325773918707152,0,5.30980553359851,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,1.03135543248187,1.02131881726136,0.540183282093931,0.258717367565509,1.07168517515796,0.532020700926821,0.356737635204141,0.987294123612726,0.608929898229199,0,0,0.441056796109924,0.32977250588296,1.93757312035087,0.482503399425247,0,0,0.582961673259701,26.3303928854924,0.170870880797853,0,0.555583582109135,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0.954670618015114,1.10717597753397,0.406638934253697,0.86404272657441,0.836353184057875,0.87345025498471,0.134864346384821,0.41326727862668,0,1.29614973291793,0.621339313086926,3.94585057078933,0,0.165458490457098,0.583353565032143,0.516639293910924,0.506868376472335,0.704143431874524,0.651021924219751,0.104859344425711,1.44950472495604,3.16833006883652,1.58005560314089,0.202725215290164,0,0.389762468933385,2.14832034800978,1.78813219303138,1.44234539423963,1.47689527174577,1.21159739937777,1.67654974641,2.62148081355785,1.46186821109629,2.02044867444692,0.584384510907845,1.81384306892169,0,0,0,1.54551675225752,0.187682475451182,0,0,1.00314420807073,27.6728402882363,27.6195141904306,27.498984645091,36.9484342038928,38.364621107156,46.0790277407717,46.5765525159946,36.9263386643861,42.5953864445152,44.0096264989047,0.207574695168353,0.798049746802062,0.512200817262403,0.972426868273176,0.628839487883947,0.919217542250071,1.55572709461131,2.67845574410562,1.28367683836726,0.758091635291392,1.01391719956096,1.13175804831646,0.842773567228942,1.92075457214608,0.918967503289812,1.90517476513229,1.97003354106254,1.73618298417335,1.64834360321323,1.47198920134397,1.02860775715625,0.70990322463735,0.476872379894642,2.0348498328526,1.2234219453993,1.18460451048347,1.28049581010941,1.05227884575137,0.814824683075171,1.68342681497322,1.42362021749009,2.1670986122624,1.22769312950907,1.70430525304563,1.73615949883027,3.49734809113124,0.467863216890817,0.429742108096597,1.14772999241306,0.661774257358546,0.695603506861264
|short_description=p1@Cnnm1
|short_description=p1@Cnnm1
}}
}}

Latest revision as of 19:23, 25 September 2015

Short description:p1@Cnnm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cnnm1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000165311, ENSMUST00000167527, NM_031396, uc008hoh.2, uc012bma.1_5end
EntrezGene:Cnnm1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cnnm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.91
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B260.61
cerebellum, neonate N30.CNhs11135.1395-42I269.54
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A439.84
corpus striatum, adult.CNhs10487.19-21D834.31
corpus striatum, neonate N00.CNhs11226.630-43F14.52
cortex, adult.CNhs10473.12-14D531.98
cortex, neonate N30.CNhs11107.1392-42F228.13
diencephalon, adult.CNhs10482.20-12F227.22
diencephalon, neonate N30.CNhs11201.1388-42B230.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E838.27
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D53.86
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F37.22
kidney, neonate N30.CNhs11203.1385-42H110.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C225.85
medulla oblongata, neonate N30.CNhs11200.1396-42A319.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I936.31
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C926.33
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A327.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D736.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A438.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.08
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A646.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.93
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A842.60
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A944.01
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.01e-1123
neuroblast (sensu Vertebrata)3.01e-1123
neuron5.13e-0733
neuronal stem cell5.13e-0733
neuroblast5.13e-0733
electrically signaling cell5.13e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.21e-2154
neural tube3.56e-1952
neural rod3.56e-1952
future spinal cord3.56e-1952
neural keel3.56e-1952
gray matter7.09e-1934
neurectoderm1.41e-1764
neural plate1.41e-1764
presumptive neural plate1.41e-1764
central nervous system1.72e-1773
nervous system1.67e-1675
brain7.19e-1647
future brain7.19e-1647
brain grey matter2.14e-1529
regional part of telencephalon2.14e-1529
telencephalon2.14e-1529
regional part of brain4.29e-1546
ecto-epithelium4.73e-1473
ectoderm-derived structure1.09e-1395
ectoderm1.09e-1395
presumptive ectoderm1.09e-1395
anterior neural tube2.46e-1340
pre-chordal neural plate1.12e-1249
regional part of forebrain1.48e-1239
forebrain1.48e-1239
future forebrain1.48e-1239
cerebral cortex2.72e-1021
cerebral hemisphere2.72e-1021
pallium2.72e-1021
occipital lobe3.90e-1010
visual cortex3.90e-1010
neocortex3.90e-1010
regional part of cerebral cortex7.75e-0917
structure with developmental contribution from neural crest8.89e-0892
posterior neural tube9.38e-0712
chordal neural plate9.38e-0712
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