FFCP PHASE1:Hg19::chr11:8932781..8932807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56672 | |EntrezGene=56672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1170 | |HGNC=1170 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001mha.2,uc010rbr.1,uc010rbs.1_5end | |association_with_transcript=0bp_to_uc001mha.2,uc010rbr.1,uc010rbs.1_5end | ||
|cluster_id=chr11:8932781..8932807,+ | |||
|description=CAGE_peak_3_at_AKIP1_5end | |description=CAGE_peak_3_at_AKIP1_5end | ||
|id=chr11:8932781..8932807,+ | |id=chr11:8932781..8932807,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.80e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.05e-07,5;CL:0002028,3.05e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.99e-13!94;UBERON:0001016!1.99e-13!94;UBERON:0005743!2.05e-13!86;UBERON:0001017!6.68e-13!82;UBERON:0003075!1.29e-11!86;UBERON:0007284!1.29e-11!86;UBERON:0002346!1.31e-11!90;UBERON:0001049!9.24e-11!57;UBERON:0005068!9.24e-11!57;UBERON:0006241!9.24e-11!57;UBERON:0007135!9.24e-11!57;UBERON:0001893!1.60e-10!34;UBERON:0002616!2.16e-10!59;UBERON:0000955!2.40e-10!69;UBERON:0006238!2.40e-10!69;UBERON:0003056!2.87e-10!61;UBERON:0003080!5.09e-10!42;UBERON:0002780!5.30e-10!41;UBERON:0001890!5.30e-10!41;UBERON:0006240!5.30e-10!41;UBERON:0002791!5.83e-10!33;UBERON:0002020!6.81e-10!34;UBERON:0003528!6.81e-10!34;UBERON:0000924!9.92e-10!173;UBERON:0006601!9.92e-10!173;UBERON:0001869!9.97e-10!32;UBERON:0004121!1.32e-09!169;UBERON:0000033!1.82e-08!123;UBERON:0000153!2.47e-08!129;UBERON:0007811!2.47e-08!129;UBERON:0000956!8.09e-08!25;UBERON:0000203!8.09e-08!25;UBERON:0001950!3.30e-07!20;UBERON:0002619!6.42e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.33e-15;34!UBERON:0001869;1.31e-14;32!UBERON:0002791;2.36e-14;32!UBERON:0000956;7.86e-14;25!UBERON:0000203;7.86e-14;25!UBERON:0003528;9.53e-14;34!UBERON:0002020;9.53e-14;34!UBERON:0002619;3.50e-13;22!UBERON:0001950;3.81e-13;20!UBERON:0002780;2.12e-11;41!UBERON:0001890;2.12e-11;41!UBERON:0000073;1.45e-09;53!UBERON:0002616;1.45e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,2.35e-18,34;UBERON:0001016,1.20e-17,89;UBERON:0001017,2.57e-17,81;UBERON:0001869,5.62e-17,32;UBERON:0003528,8.26e-17,34;UBERON:0002020,8.26e-17,34;UBERON:0002791,8.84e-17,32;UBERON:0001049,1.50e-16,56;UBERON:0005068,1.50e-16,56;UBERON:0006241,1.50e-16,56;UBERON:0007135,1.50e-16,56;UBERON:0002780,3.55e-16,41;UBERON:0001890,3.55e-16,41;UBERON:0003080,3.55e-16,41;UBERON:0006240,3.55e-16,41;UBERON:0000073,1.42e-15,53;UBERON:0002616,1.42e-15,53;UBERON:0000955,8.54e-15,68;UBERON:0006238,8.54e-15,68;UBERON:0000956,5.44e-14,25;UBERON:0000203,5.44e-14,25;UBERON:0002619,1.46e-13,22;UBERON:0001950,1.84e-13,20;UBERON:0003056,3.31e-13,61;UBERON:0003075,5.16e-13,82;UBERON:0007284,5.16e-13,82;UBERON:0002346,1.71e-12,86;UBERON:0010371,2.01e-11,104;UBERON:0004121,8.84e-10,171;UBERON:0000924,8.84e-10,171;UBERON:0006601,8.84e-10,171;UBERON:0010314,1.80e-07,132 | |||
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| ||
|short_description=p3@AKIP1 | |short_description=p3@AKIP1 | ||
}} | }} |
Latest revision as of 00:23, 25 September 2015
Short description: | p3@AKIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AKIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001mha.2, uc010rbr.1, uc010rbs.1_5end |
EntrezGene: | AKIP1 |
HGNC: | 1170 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.05e-07 | 5 |
basophil mast progenitor cell | 3.05e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
telencephalon | 2.35e-18 | 34 |
nervous system | 1.20e-17 | 89 |
central nervous system | 2.57e-17 | 81 |
cerebral hemisphere | 5.62e-17 | 32 |
brain grey matter | 8.26e-17 | 34 |
gray matter | 8.26e-17 | 34 |
regional part of telencephalon | 8.84e-17 | 32 |
neural tube | 1.50e-16 | 56 |
neural rod | 1.50e-16 | 56 |
future spinal cord | 1.50e-16 | 56 |
neural keel | 1.50e-16 | 56 |
regional part of forebrain | 3.55e-16 | 41 |
forebrain | 3.55e-16 | 41 |
anterior neural tube | 3.55e-16 | 41 |
future forebrain | 3.55e-16 | 41 |
regional part of nervous system | 1.42e-15 | 53 |
regional part of brain | 1.42e-15 | 53 |
brain | 8.54e-15 | 68 |
future brain | 8.54e-15 | 68 |
cerebral cortex | 5.44e-14 | 25 |
pallium | 5.44e-14 | 25 |
regional part of cerebral cortex | 1.46e-13 | 22 |
neocortex | 1.84e-13 | 20 |
pre-chordal neural plate | 3.31e-13 | 61 |
neural plate | 5.16e-13 | 82 |
presumptive neural plate | 5.16e-13 | 82 |
neurectoderm | 1.71e-12 | 86 |
ecto-epithelium | 2.01e-11 | 104 |
ectoderm-derived structure | 8.84e-10 | 171 |
ectoderm | 8.84e-10 | 171 |
presumptive ectoderm | 8.84e-10 | 171 |
structure with developmental contribution from neural crest | 1.80e-07 | 132 |