FFCP PHASE1:Hg19::chr12:123635534..123635573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57605 | |EntrezGene=57605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21044 | |HGNC=21044 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZ72 | |UniProt=Q9BZ72 | ||
|association_with_transcript=-249bp_to_uc001uek.1_5end | |association_with_transcript=-249bp_to_uc001uek.1_5end | ||
|cluster_id=chr12:123635534..123635573,- | |||
|description=CAGE_peak_2_at_PITPNM2_5end | |description=CAGE_peak_2_at_PITPNM2_5end | ||
|id=chr12:123635534..123635573,- | |id=chr12:123635534..123635573,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.87e-24!115;UBERON:0004111!5.23e-15!241;UBERON:0000025!1.78e-14!194;UBERON:0000477!1.88e-13!286;UBERON:0001049!1.35e-11!57;UBERON:0005068!1.35e-11!57;UBERON:0006241!1.35e-11!57;UBERON:0007135!1.35e-11!57;UBERON:0002616!3.94e-10!59;UBERON:0000955!4.72e-10!69;UBERON:0006238!4.72e-10!69;UBERON:0003075!5.89e-10!86;UBERON:0007284!5.89e-10!86;UBERON:0000483!7.82e-10!309;UBERON:0000119!1.17e-09!312;UBERON:0001017!2.02e-09!82;UBERON:0002020!6.88e-09!34;UBERON:0003528!6.88e-09!34;UBERON:0005743!7.58e-09!86;UBERON:0003080!8.48e-09!42;UBERON:0002780!1.19e-08!41;UBERON:0001890!1.19e-08!41;UBERON:0006240!1.19e-08!41;UBERON:0001893!1.32e-08!34;UBERON:0001869!2.07e-08!32;UBERON:0002346!2.66e-08!90;UBERON:0002791!3.67e-08!33;UBERON:0002619!5.57e-08!22;UBERON:0000073!1.71e-07!94;UBERON:0001016!1.71e-07!94;UBERON:0000064!2.18e-07!219;UBERON:0001950!2.27e-07!20;UBERON:0000481!2.61e-07!347;UBERON:0000956!5.73e-07!25;UBERON:0000203!5.73e-07!25;UBERON:0003056!7.28e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.19e-09;22!UBERON:0001950;5.34e-09;20!UBERON:0003528;4.59e-08;34!UBERON:0002020;4.59e-08;34!UBERON:0007023;5.88e-08;114!UBERON:0001869;6.39e-08;32!UBERON:0001893;7.39e-08;34!UBERON:0002791;7.77e-08;32!UBERON:0000956;1.33e-07;25!UBERON:0000203;1.33e-07;25!UBERON:0002780;5.79e-07;41!UBERON:0001890;5.79e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.57e-28,114;UBERON:0000025,7.14e-14,192;UBERON:0004111,1.47e-12,240;UBERON:0001049,5.75e-12,56;UBERON:0005068,5.75e-12,56;UBERON:0006241,5.75e-12,56;UBERON:0007135,5.75e-12,56;UBERON:0000073,7.35e-12,53;UBERON:0002616,7.35e-12,53;UBERON:0003075,3.21e-10,82;UBERON:0007284,3.21e-10,82;UBERON:0002619,3.97e-10,22;UBERON:0003528,6.86e-10,34;UBERON:0002020,6.86e-10,34;UBERON:0000955,7.69e-10,68;UBERON:0006238,7.69e-10,68;UBERON:0002780,9.26e-10,41;UBERON:0001890,9.26e-10,41;UBERON:0003080,9.26e-10,41;UBERON:0006240,9.26e-10,41;UBERON:0001893,1.50e-09,34;UBERON:0001950,2.30e-09,20;UBERON:0001869,2.69e-09,32;UBERON:0002346,6.23e-09,86;UBERON:0002791,6.45e-09,32;UBERON:0001017,1.07e-08,81;UBERON:0000956,5.26e-08,25;UBERON:0000203,5.26e-08,25;UBERON:0010314,1.61e-07,132;UBERON:0001016,1.82e-07,89;UBERON:0000483,2.14e-07,306;UBERON:0003056,2.74e-07,61;UBERON:0000119,5.39e-07,309;UBERON:0010371,8.35e-07,104 | |||
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| ||
|short_description=p2@PITPNM2 | |short_description=p2@PITPNM2 | ||
}} | }} |
Latest revision as of 01:31, 17 September 2015
Short description: | p2@PITPNM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PITPNM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -249bp_to_uc001uek.1_5end |
EntrezGene: | PITPNM2 |
HGNC: | 21044 |
UniProt: | Q9BZ72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.57e-28 | 114 |
tube | 7.14e-14 | 192 |
anatomical conduit | 1.47e-12 | 240 |
neural tube | 5.75e-12 | 56 |
neural rod | 5.75e-12 | 56 |
future spinal cord | 5.75e-12 | 56 |
neural keel | 5.75e-12 | 56 |
regional part of nervous system | 7.35e-12 | 53 |
regional part of brain | 7.35e-12 | 53 |
neural plate | 3.21e-10 | 82 |
presumptive neural plate | 3.21e-10 | 82 |
regional part of cerebral cortex | 3.97e-10 | 22 |
brain grey matter | 6.86e-10 | 34 |
gray matter | 6.86e-10 | 34 |
brain | 7.69e-10 | 68 |
future brain | 7.69e-10 | 68 |
regional part of forebrain | 9.26e-10 | 41 |
forebrain | 9.26e-10 | 41 |
anterior neural tube | 9.26e-10 | 41 |
future forebrain | 9.26e-10 | 41 |
telencephalon | 1.50e-09 | 34 |
neocortex | 2.30e-09 | 20 |
cerebral hemisphere | 2.69e-09 | 32 |
neurectoderm | 6.23e-09 | 86 |
regional part of telencephalon | 6.45e-09 | 32 |
central nervous system | 1.07e-08 | 81 |
cerebral cortex | 5.26e-08 | 25 |
pallium | 5.26e-08 | 25 |
structure with developmental contribution from neural crest | 1.61e-07 | 132 |
nervous system | 1.82e-07 | 89 |
epithelium | 2.14e-07 | 306 |
pre-chordal neural plate | 2.74e-07 | 61 |
cell layer | 5.39e-07 | 309 |
ecto-epithelium | 8.35e-07 | 104 |