FFCP PHASE1:Hg19::chr12:124915257..124915277,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9612 | |EntrezGene=9612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7673 | |HGNC=7673 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-70bp_to_ENST00000494460_5end | |association_with_transcript=-70bp_to_ENST00000494460_5end | ||
|cluster_id=chr12:124915257..124915277,- | |||
|description=CAGE_peak_23_at_NCOR2_5end | |description=CAGE_peak_23_at_NCOR2_5end | ||
|id=chr12:124915257..124915277,- | |id=chr12:124915257..124915277,- | ||
|ontology_enrichment_celltype=CL:0000839!6.71e-12!70;CL:0002057!2.22e-11!42;CL:0000860!2.74e-11!45;CL:0000557!1.30e-10!71;CL:0002194!5.83e-10!63;CL:0000576!5.83e-10!63;CL:0000040!5.83e-10!63;CL:0000559!5.83e-10!63;CL:0000766!2.45e-09!76;CL:0002009!3.34e-09!65 | |ontology_enrichment_celltype=CL:0000839!6.71e-12!70;CL:0002057!2.22e-11!42;CL:0000860!2.74e-11!45;CL:0000557!1.30e-10!71;CL:0002194!5.83e-10!63;CL:0000576!5.83e-10!63;CL:0000040!5.83e-10!63;CL:0000559!5.83e-10!63;CL:0000766!2.45e-09!76;CL:0002009!3.34e-09!65 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.09e-22;39!CL:0000234;1.09e-22;39!CL:0000860;2.15e-21;33!CL:0002057;2.15e-21;33!CL:0000097;9.54e-16;5!CL:0000766;9.63e-11;69!CL:0000576;1.73e-09;48!CL:0000163;5.68e-09;9!CL:0000763;8.89e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.50e-24,66;CL:0000557,6.23e-24,67;CL:0000766,4.14e-22,72;CL:0000473,7.85e-22,48;CL:0000234,7.85e-22,48;CL:0000860,1.69e-17,42;CL:0002057,1.69e-17,42;CL:0002194,4.67e-17,59;CL:0000576,4.67e-17,59;CL:0000040,4.67e-17,59;CL:0000559,4.67e-17,59;CL:0002009,1.93e-16,61;CL:0000097,9.35e-16,5;CL:0002028,9.35e-16,5;CL:0000763,6.47e-14,108;CL:0000049,6.47e-14,108;CL:0002031,2.89e-12,120;CL:0000738,1.62e-10,136;CL:0000163,5.62e-09,9;CL:0000988,1.20e-08,177;CL:0002032,1.79e-08,161;CL:0000837,1.79e-08,161;CL:0000037,5.20e-08,168;CL:0002087,7.88e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.99e-13;42!UBERON:0005425;2.65e-09;1!CL:0000049;4.98e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.04e-09!80;UBERON:0004765!7.38e-09!101;UBERON:0001434!7.38e-09!101;UBERON:0001474!5.00e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.65e-09;1!UBERON:0001785;2.65e-09;1!UBERON:0002464;2.65e-09;1!UBERON:0004904;2.65e-09;1!UBERON:0001021;2.65e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.03e-21,76;UBERON:0001474,4.02e-19,82;UBERON:0004765,3.33e-17,90;UBERON:0002405,1.44e-16,93;UBERON:0002390,1.35e-15,98;UBERON:0003061,1.35e-15,98;UBERON:0001434,3.12e-15,100;UBERON:0002193,6.47e-14,108;UBERON:0003081,8.86e-11,203;UBERON:0000941,1.56e-09,1;UBERON:0001785,1.56e-09,1;UBERON:0002464,1.56e-09,1;UBERON:0004904,1.56e-09,1;UBERON:0001021,1.56e-09,1;UBERON:0003902,1.56e-09,1;UBERON:0005425,1.56e-09,1;UBERON:0002204,4.49e-08,167 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0.257575567634187,0.581592955118259,1.13362783106643,0.970336244751265,1.39457422143411,0,1.23882548358041,0,0.256160706529101,0.236482229888585,0,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0.674170453335254,2.44867113896722,1.60464513538047,0,0.659702600373432,0.598390972864896,0.426224750532694,1.45104619314292,0.56738522469114,1.24564449799115,0.502497330513487,1.0429658368404,0.434377689410233,1.21079900526674,0.368277635987565,0.632924774881769,0,0,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0.98667019366864,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0,0,0.206105058476878,0,0.744467425326359,0,0.0974370051611986,0,0.0920498986422993,0.484938170456436,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0.968532774145487,4.14656231081544,3.60299883542404,5.0496973370552,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.112131084345361,0,0.1466765716419,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.099972991182057,1.2162378064119,1.00451418286425,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0.431255149719035,0.128343036279748,0.508189248444927,1.30139853857622,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0.384417447767103,0,0.321707842287215,0,0,0.532685175939381,0,0.519254429183621,0.116210378459959,0.362578348774867,0,0.184161977871793,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0,0,0,1.00337954770971,0,0,0.223874754722178,0,0.522870902049801,0,0.656029291399411,0.325378394664303,0,0.0915694648183434,0,0,0,0,0.48335359146061,0,0.15350367472613,0,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.422215270595328,0.987884678879706,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0.211673582723883,0,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0,0.16480387422676,0,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0.32681539055697,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.365446585430928,0,0.193978032976839,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0.39961921916426,0.432271251462318,0,0,0.14405479798815,0.372757606696298,0,0,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0.321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| 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| ||
|short_description=p23@NCOR2 | |short_description=p23@NCOR2 | ||
}} | }} |
Latest revision as of 03:46, 17 September 2015
Short description: | p23@NCOR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_NCOR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -70bp_to_ENST00000494460_5end |
EntrezGene: | NCOR2 |
HGNC: | 7673 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.50e-24 | 66 |
granulocyte monocyte progenitor cell | 6.23e-24 | 67 |
myeloid leukocyte | 4.14e-22 | 72 |
defensive cell | 7.85e-22 | 48 |
phagocyte | 7.85e-22 | 48 |
classical monocyte | 1.69e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-17 | 42 |
monopoietic cell | 4.67e-17 | 59 |
monocyte | 4.67e-17 | 59 |
monoblast | 4.67e-17 | 59 |
promonocyte | 4.67e-17 | 59 |
macrophage dendritic cell progenitor | 1.93e-16 | 61 |
mast cell | 9.35e-16 | 5 |
basophil mast progenitor cell | 9.35e-16 | 5 |
myeloid cell | 6.47e-14 | 108 |
common myeloid progenitor | 6.47e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 2.89e-12 | 120 |
leukocyte | 1.62e-10 | 136 |
endocrine cell | 5.62e-09 | 9 |
hematopoietic cell | 1.20e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.79e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-08 | 161 |
hematopoietic stem cell | 5.20e-08 | 168 |
nongranular leukocyte | 7.88e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.03e-21 | 76 |
bone element | 4.02e-19 | 82 |
skeletal element | 3.33e-17 | 90 |
immune system | 1.44e-16 | 93 |
hematopoietic system | 1.35e-15 | 98 |
blood island | 1.35e-15 | 98 |
skeletal system | 3.12e-15 | 100 |
hemolymphoid system | 6.47e-14 | 108 |
lateral plate mesoderm | 8.86e-11 | 203 |
cranial nerve II | 1.56e-09 | 1 |
cranial nerve | 1.56e-09 | 1 |
nerve trunk | 1.56e-09 | 1 |
nerve connecting eye with brain | 1.56e-09 | 1 |
nerve | 1.56e-09 | 1 |
retinal neural layer | 1.56e-09 | 1 |
presumptive neural retina | 1.56e-09 | 1 |
musculoskeletal system | 4.49e-08 | 167 |