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FFCP PHASE1:Mm9::chr19:38339145..38339193,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56839
|EntrezGene=56839
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9JIA1
|UniProt=Q9JIA1
|association_with_transcript=-78bp_to_ENSMUST00000087252,ENSMUST00000134832,NM_020278,uc008hji.1_5end
|association_with_transcript=-78bp_to_ENSMUST00000087252,ENSMUST00000134832,NM_020278,uc008hji.1_5end
|cluster_id=chr19:38339145..38339193,+
|description=CAGE_peak_2_at_Lgi1_5end
|description=CAGE_peak_2_at_Lgi1_5end
|id=chr19:38339145..38339193,+
|id=chr19:38339145..38339193,+
|ontology_enrichment_celltype=CL:0000117!3.31e-09!23;CL:0000337!3.31e-09!23
|ontology_enrichment_celltype=CL:0000117!3.31e-09!23;CL:0000337!3.31e-09!23
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.90e-20!71;UBERON:0003075!3.90e-20!71;UBERON:0007284!3.90e-20!71;UBERON:0001049!1.18e-19!52;UBERON:0005068!1.18e-19!52;UBERON:0006241!1.18e-19!52;UBERON:0007135!1.18e-19!52;UBERON:0000033!1.38e-19!63;UBERON:0000955!7.72e-19!50;UBERON:0006238!7.72e-19!50;UBERON:0002616!3.43e-18!49;UBERON:0003056!1.49e-17!49;UBERON:0001017!4.77e-16!73;UBERON:0005743!4.77e-16!73;UBERON:0004121!5.86e-16!102;UBERON:0000924!5.86e-16!102;UBERON:0006601!5.86e-16!102;UBERON:0000073!9.05e-16!75;UBERON:0001016!9.05e-16!75;UBERON:0002020!1.97e-15!34;UBERON:0003080!3.29e-15!40;UBERON:0002780!1.83e-14!39;UBERON:0001890!1.83e-14!39;UBERON:0006240!1.83e-14!39;UBERON:0002791!6.60e-13!29;UBERON:0003528!6.60e-13!29;UBERON:0001893!6.60e-13!29;UBERON:0007811!1.38e-09!86;UBERON:0000153!5.83e-09!94;UBERON:0000956!8.60e-09!21;UBERON:0001869!8.60e-09!21;UBERON:0000203!8.60e-09!21;UBERON:0002021!9.47e-09!10;UBERON:0000411!9.47e-09!10;UBERON:0001950!9.47e-09!10;UBERON:0002619!9.95e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.22e-21,54;UBERON:0001049,1.25e-19,52;UBERON:0005068,1.25e-19,52;UBERON:0006241,1.25e-19,52;UBERON:0007135,1.25e-19,52;UBERON:0002346,5.98e-19,64;UBERON:0003075,5.98e-19,64;UBERON:0007284,5.98e-19,64;UBERON:0000955,1.25e-16,47;UBERON:0006238,1.25e-16,47;UBERON:0002020,1.62e-16,34;UBERON:0002616,9.60e-16,46;UBERON:0010371,4.42e-15,73;UBERON:0001017,4.47e-15,73;UBERON:0001016,2.38e-14,75;UBERON:0003056,4.85e-14,49;UBERON:0003528,9.69e-14,29;UBERON:0002791,9.69e-14,29;UBERON:0001893,9.69e-14,29;UBERON:0002021,2.17e-13,10;UBERON:0000411,2.17e-13,10;UBERON:0001950,2.17e-13,10;UBERON:0004121,3.25e-13,95;UBERON:0000924,3.25e-13,95;UBERON:0006601,3.25e-13,95;UBERON:0003080,3.47e-13,40;UBERON:0002780,3.33e-12,39;UBERON:0001890,3.33e-12,39;UBERON:0006240,3.33e-12,39;UBERON:0010314,1.35e-11,92;UBERON:0002619,1.08e-09,17;UBERON:0000956,1.12e-08,21;UBERON:0001869,1.12e-08,21;UBERON:0000203,1.12e-08,21;UBERON:0003076,1.93e-07,12;UBERON:0003057,1.93e-07,12
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.810035629990144,0.420649922702764,4.28476476605705,3.3130281142742,0.367472397644862,0.479227355091182,0.919218786610021,8.8092704799511,21.3237854602263,21.5049146558741,0.923204014111357,1.55528994124096,1.56274011167028,14.5175159480718,14.6318278608237,21.0861581931998,8.2496003932627,8.25755748634797,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0.742210695324124,0.867426633830679,0,0,0.452167921657868,1.05829836422134,0.376999773989026,0,0.289198713839823,2.65383165584962,0.485300549842228,0.441683036920787,0.484875253135222,1.86391761218122,30.4492028892009,18.431310199584,0.510914110417183,0,0,0,58.4183493678809,55.8150735438724,4.14659361972453,60.6646877471045,31.708716708961,38.0252121543995,23.5249831448249,0.407357455401265,0.373220911830279,0,1.47309299120532,0.910843100738926,0.229902104433473,0.720248519221397,1.20563854268572,1.08858398642125,1.15302348256365,0.374806898238915,4.65666067330228,0,0,0.351902248327898,0.657587197282725,0,1.39300866608867,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0.658650345873152,1.07365135008297,40.3756701243124,3.91037527041281,0,0,0,0.696710015581316,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0.596869416123452,0.58489226135736,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0.420814919341911,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0.983528546038072,0,43.8303110666672,22.8562788854796,0,0.252470927204373,0,0,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0.395287777946524,17.9939937196212,0.283880170416537,1.06839362200353,1.14020871547503,2.14461159864296,1.32745138339963,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,3.06395645178409,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,1.32317038832977,0.49465875882444,0,0,0.238744688006273,0,0.291480836629851,58.0381195292895,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.324016022465404,0.418176592028937,0,0.404593039154462,0.41326727862668,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0.608175645870493,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,2.26730383615211,0,0,0,0.965947970160952,0,0.36630324853453,0.214368379079066,5.517293144389,41.2268845110459,41.8895965221531,30.9363577257274,37.6358469332676,47.2706938641743,41.5466643564335,46.5765525159946,51.3366171675611,58.4553707589624,42.4563455636492,0,0.798049746802062,0.341467211508268,1.70174701947806,1.25767897576789,0.551530525350042,2.44471400581777,2.06035057238894,1.92551525755089,2.02157769411038,2.02783439912192,1.32038438970253,1.77918864192777,0.960377286073039,1.37845125493472,0.476293691283074,1.27472758539341,0.578727661391115,2.06042950401653,1.32479028120958,1.02860775715625,1.95223386775271,2.62279808942053,1.16277133305863,1.41164070622996,1.35383372626682,2.19513567447327,0.789209134313529,0.814824683075171,0.561142271657738,0.593175090620871,0.788035859004508,1.63692417267876,2.01417893541756,1.54325288784913,2.49810577937946,1.63752125911786,1.07435527024149,1.91288332068843,2.64709702943419,2.78241402744506
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.810035629990144,0.420649922702764,4.28476476605705,3.3130281142742,0.367472397644862,0.479227355091182,0.919218786610021,8.8092704799511,21.3237854602263,21.5049146558741,0.923204014111357,1.55528994124096,1.56274011167028,14.5175159480718,14.6318278608237,21.0861581931998,8.2496003932627,8.25755748634797,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0.742210695324124,0.867426633830679,0,0,0.452167921657868,1.05829836422134,0.376999773989026,0,0.289198713839823,2.65383165584962,0.485300549842228,0.441683036920787,0.484875253135222,1.86391761218122,30.4492028892009,18.431310199584,0.510914110417183,0,0,0,58.4183493678809,55.8150735438724,4.14659361972453,60.6646877471045,31.708716708961,38.0252121543995,23.5249831448249,0.407357455401265,0.373220911830279,0,1.47309299120532,0.910843100738926,0.229902104433473,0.720248519221397,1.20563854268572,1.08858398642125,1.15302348256365,0.374806898238915,4.65666067330228,0,0,0.351902248327898,0.657587197282725,0,1.39300866608867,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0.658650345873152,1.07365135008297,40.3756701243124,3.91037527041281,0,0,0,0.696710015581316,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0.596869416123452,0.58489226135736,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0.420814919341911,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0.983528546038072,0,43.8303110666672,22.8562788854796,0,0.252470927204373,0,0,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0.395287777946524,17.9939937196212,0.283880170416537,1.06839362200353,1.14020871547503,2.14461159864296,1.32745138339963,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,3.06395645178409,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,1.32317038832977,0.49465875882444,0,0,0.238744688006273,0,0.291480836629851,58.0381195292895,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.324016022465404,0.418176592028937,0,0.404593039154462,0.41326727862668,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0.608175645870493,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,2.26730383615211,0,0,0,0.965947970160952,0,0.36630324853453,0.214368379079066,5.517293144389,41.2268845110459,41.8895965221531,30.9363577257274,37.6358469332676,47.2706938641743,41.5466643564335,46.5765525159946,51.3366171675611,58.4553707589624,42.4563455636492,0,0.798049746802062,0.341467211508268,1.70174701947806,1.25767897576789,0.551530525350042,2.44471400581777,2.06035057238894,1.92551525755089,2.02157769411038,2.02783439912192,1.32038438970253,1.77918864192777,0.960377286073039,1.37845125493472,0.476293691283074,1.27472758539341,0.578727661391115,2.06042950401653,1.32479028120958,1.02860775715625,1.95223386775271,2.62279808942053,1.16277133305863,1.41164070622996,1.35383372626682,2.19513567447327,0.789209134313529,0.814824683075171,0.561142271657738,0.593175090620871,0.788035859004508,1.63692417267876,2.01417893541756,1.54325288784913,2.49810577937946,1.63752125911786,1.07435527024149,1.91288332068843,2.64709702943419,2.78241402744506
|short_description=p2@Lgi1
|short_description=p2@Lgi1
}}
}}

Latest revision as of 16:56, 25 September 2015

Short description:p2@Lgi1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lgi1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -78bp_to_ENSMUST00000087252, ENSMUST00000134832, NM_020278, uc008hji.1_5end
EntrezGene:Lgi1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lgi1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B230.45
cerebellum, neonate N30.CNhs11135.1395-42I218.43
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A458.42
corpus striatum, adult.CNhs10487.19-21D855.82
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D560.66
cortex, neonate N30.CNhs11107.1392-42F231.71
diencephalon, adult.CNhs10482.20-12F238.03
diencephalon, neonate N30.CNhs11201.1388-42B223.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E840.38
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C243.83
medulla oblongata, neonate N30.CNhs11200.1396-42A322.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C958.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A447.27
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A646.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A751.34
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A858.46
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A942.46
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.78





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.22e-2154
neural tube1.25e-1952
neural rod1.25e-1952
future spinal cord1.25e-1952
neural keel1.25e-1952
neurectoderm5.98e-1964
neural plate5.98e-1964
presumptive neural plate5.98e-1964
brain1.25e-1647
future brain1.25e-1647
gray matter1.62e-1634
regional part of brain9.60e-1646
ecto-epithelium4.42e-1573
central nervous system4.47e-1573
nervous system2.38e-1475
pre-chordal neural plate4.85e-1449
brain grey matter9.69e-1429
regional part of telencephalon9.69e-1429
telencephalon9.69e-1429
occipital lobe2.17e-1310
visual cortex2.17e-1310
neocortex2.17e-1310
ectoderm-derived structure3.25e-1395
ectoderm3.25e-1395
presumptive ectoderm3.25e-1395
anterior neural tube3.47e-1340
regional part of forebrain3.33e-1239
forebrain3.33e-1239
future forebrain3.33e-1239
structure with developmental contribution from neural crest1.35e-1192
regional part of cerebral cortex1.08e-0917
cerebral cortex1.12e-0821
cerebral hemisphere1.12e-0821
pallium1.12e-0821
posterior neural tube1.93e-0712
chordal neural plate1.93e-0712
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