FFCP PHASE1:Mm9::chr11:116442789..116442827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217342 | |EntrezGene=217342 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6ZPJ3 | |UniProt=Q6ZPJ3 | ||
|association_with_transcript=-28bp_to_ENSMUST00000082152,NM_173755,uc007mln.1_5end | |association_with_transcript=-28bp_to_ENSMUST00000082152,NM_173755,uc007mln.1_5end | ||
|cluster_id=chr11:116442789..116442827,- | |||
|description=CAGE_peak_2_at_Ube2o_5end | |description=CAGE_peak_2_at_Ube2o_5end | ||
|id=chr11:116442789..116442827,- | |id=chr11:116442789..116442827,- | ||
|ontology_enrichment_celltype=CL:0000540!4.97e-13!33;CL:0000047!4.97e-13!33;CL:0000031!4.97e-13!33;CL:0000404!4.97e-13!33;CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000393!7.73e-12!39;CL:0000211!7.73e-12!39;CL:0002319!6.01e-11!43;CL:0000221!8.20e-11!44;CL:0000133!8.20e-11!44;CL:0000055!1.24e-09!50 | |ontology_enrichment_celltype=CL:0000540!4.97e-13!33;CL:0000047!4.97e-13!33;CL:0000031!4.97e-13!33;CL:0000404!4.97e-13!33;CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000393!7.73e-12!39;CL:0000211!7.73e-12!39;CL:0002319!6.01e-11!43;CL:0000221!8.20e-11!44;CL:0000133!8.20e-11!44;CL:0000055!1.24e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.96e-13,33;CL:0000047,4.96e-13,33;CL:0000031,4.96e-13,33;CL:0000404,4.96e-13,33;CL:0000117,1.72e-12,23;CL:0000337,1.72e-12,23;CL:0000393,7.72e-12,39;CL:0000211,7.72e-12,39;CL:0002319,6.00e-11,43;CL:0000221,8.19e-11,44;CL:0000133,8.19e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.29e-27!73;UBERON:0005743!3.29e-27!73;UBERON:0000073!1.38e-25!75;UBERON:0001016!1.38e-25!75;UBERON:0001049!6.70e-22!52;UBERON:0005068!6.70e-22!52;UBERON:0006241!6.70e-22!52;UBERON:0007135!6.70e-22!52;UBERON:0000955!2.88e-21!50;UBERON:0006238!2.88e-21!50;UBERON:0002346!8.37e-21!71;UBERON:0003075!8.37e-21!71;UBERON:0007284!8.37e-21!71;UBERON:0002616!1.43e-20!49;UBERON:0004121!2.34e-20!102;UBERON:0000924!2.34e-20!102;UBERON:0006601!2.34e-20!102;UBERON:0000033!1.28e-19!63;UBERON:0002020!3.47e-17!34;UBERON:0003056!2.22e-16!49;UBERON:0003080!2.76e-16!40;UBERON:0002780!1.29e-15!39;UBERON:0001890!1.29e-15!39;UBERON:0006240!1.29e-15!39;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000025!1.44e-12!114;UBERON:0004111!9.70e-12!122;UBERON:0000153!2.21e-11!94;UBERON:0007811!2.53e-11!86;UBERON:0000956!2.61e-10!21;UBERON:0001869!2.61e-10!21;UBERON:0000203!2.61e-10!21;UBERON:0002619!1.99e-08!17;UBERON:0000477!1.15e-07!154;UBERON:0000468!1.58e-07!333;UBERON:0000475!2.99e-07!200;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!3.29e-27!73;UBERON:0005743!3.29e-27!73;UBERON:0000073!1.38e-25!75;UBERON:0001016!1.38e-25!75;UBERON:0001049!6.70e-22!52;UBERON:0005068!6.70e-22!52;UBERON:0006241!6.70e-22!52;UBERON:0007135!6.70e-22!52;UBERON:0000955!2.88e-21!50;UBERON:0006238!2.88e-21!50;UBERON:0002346!8.37e-21!71;UBERON:0003075!8.37e-21!71;UBERON:0007284!8.37e-21!71;UBERON:0002616!1.43e-20!49;UBERON:0004121!2.34e-20!102;UBERON:0000924!2.34e-20!102;UBERON:0006601!2.34e-20!102;UBERON:0000033!1.28e-19!63;UBERON:0002020!3.47e-17!34;UBERON:0003056!2.22e-16!49;UBERON:0003080!2.76e-16!40;UBERON:0002780!1.29e-15!39;UBERON:0001890!1.29e-15!39;UBERON:0006240!1.29e-15!39;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000025!1.44e-12!114;UBERON:0004111!9.70e-12!122;UBERON:0000153!2.21e-11!94;UBERON:0007811!2.53e-11!86;UBERON:0000956!2.61e-10!21;UBERON:0001869!2.61e-10!21;UBERON:0000203!2.61e-10!21;UBERON:0002619!1.99e-08!17;UBERON:0000477!1.15e-07!154;UBERON:0000468!1.58e-07!333;UBERON:0000475!2.99e-07!200;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.28e-27,73;UBERON:0001016,1.37e-25,75;UBERON:0000073,2.20e-23,54;UBERON:0002346,1.55e-22,64;UBERON:0003075,1.55e-22,64;UBERON:0007284,1.55e-22,64;UBERON:0001049,6.68e-22,52;UBERON:0005068,6.68e-22,52;UBERON:0006241,6.68e-22,52;UBERON:0007135,6.68e-22,52;UBERON:0004121,2.42e-21,95;UBERON:0000924,2.42e-21,95;UBERON:0006601,2.42e-21,95;UBERON:0000955,3.16e-19,47;UBERON:0006238,3.16e-19,47;UBERON:0002616,1.51e-18,46;UBERON:0010371,2.32e-18,73;UBERON:0010314,1.55e-17,92;UBERON:0002020,3.46e-17,34;UBERON:0003056,2.21e-16,49;UBERON:0003080,2.76e-16,40;UBERON:0002780,1.28e-15,39;UBERON:0001890,1.28e-15,39;UBERON:0006240,1.28e-15,39;UBERON:0003528,1.43e-14,29;UBERON:0002791,1.43e-14,29;UBERON:0001893,1.43e-14,29;UBERON:0000025,1.43e-12,114;UBERON:0004111,9.68e-12,122;UBERON:0000956,2.60e-10,21;UBERON:0001869,2.60e-10,21;UBERON:0000203,2.60e-10,21;UBERON:0002619,1.99e-08,17;UBERON:0000922,2.77e-07,320;UBERON:0002021,3.05e-07,10;UBERON:0000411,3.05e-07,10;UBERON:0001950,3.05e-07,10 | |||
|phase1_expression=5.12476310735341,2.44282785347553,1.81999695755814,2.72217790176147,0.500895729946347,1.6787927191189,2.56973904655078,3.61545305636414,3.66050677594334,3.97909694747389,5.99262888789267,7.73789942254763,3.0816131387617,3.4968160967599,10.9926221399169,9.31386229993199,8.39474253753776,3.3123527362615,2.60517423850904,3.39511721438424,8.75945888556019,4.17021995043718,4.4403964153619,1.43993180514066,2.2940928106717,0.57423196411502,1.29228598847722,1.50829862880122,0.570070258369122,0.504060259519861,1.55211357458713,8.25539875497521,8.61090702618398,0,2.02196133825892,1.82858109894342,1.63335485009895,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,6.42073771675444,6.38674666682942,3.85448179539531,10.9534788208725,5.01457859675027,6.37089929929968,5.24960727500565,4.89952475688769,4.31257693094915,1.67782606057736,2.90144856804538,2.35265659399725,5.91696702882678,5.44413535883638,6.70373719960675,11.7343547298567,11.6378015439847,15.2119536841483,8.13226876965917,7.11435836888911,1.7997994345628,5.93319817540185,4.2628806896766,9.28760342607055,9.98967593836042,11.6132365785495,12.9605700798423,12.1988477583802,16.5677570954206,11.2642955885323,12.0040983230655,8.81778333367775,16.5459381589804,17.6185409599022,22.6006588410782,18.279177457493,16.2220133908138,16.1018252740241,10.4182674111352,18.4260779340911,13.5063026407603,20.0165704587621,14.4368006882097,14.8066548031067,16.7759501242771,4.24066682665831,2.41828992341714,1.15945795480671,2.58127163094416,4.0798280022465,3.2382191498269,2.59910566979068,5.82434953226536,3.37066608316204,3.91989741929533,2.59786004602869,2.47337702157238,5.63373679106722,1.28326477414318,5.09610479413291,14.2213340630666,2.81438353314578,1.26679932737549,2.02209778005913,4.22480354960522,0.776813650941515,6.82833839698194,5.55153045651635,3.34912026143355,6.6878494204257,2.86373017049983,5.76184664964954,7.03732911446183,4.6967043869531,3.7595832799177,4.42305275974937,7.44127509758082,9.05450225687614,5.33362778448744,0,11.7112318804619,13.1951425292477,1.53274233125155,1.43778149407104,0.599902730993408,1.27070227073065,20.2217363196511,14.640019290196,17.0889918873496,20.3374454624963,18.6672283851141,15.3763152974074,18.1710214635889,6.21220119486929,5.349499736234,3.28539585963777,3.78795340595653,6.76626303406059,6.43725892413724,6.66229880279792,7.08312643827861,8.16437989815934,8.07116437794554,9.65127762965207,7.76110112217047,9.91612767491074,7.75334928688059,8.44565395986955,6.1374805079721,5.83899223373756,7.3132954969655,4.52720700097476,8.55847347319521,0.702213187313235,0.51469581422943,1.42081749697796,6.62802472113606,4.22146907965973,5.76198596675248,7.10234206755631,3.54175617145327,6.63348585415727,4.41814495025775,4.56064782379353,3.50296027101508,5.10135534731789,5.74586124276833,7.53939928776458,7.30999937126662,6.80605357402257,5.36825675041487,11.565947171027,12.657267322652,2.31293148088659,1.85115396664481,6.82522401712749,5.10920678092965,4.89696353023955,3.22693639397348,2.89091456998331,4.37518940058886,3.79623249235609,3.45867804920423,3.2673577144035,3.58121649674071,1.9496408711912,2.69645822596266,2.59365659849633,2.19055400579804,5.50036912763937,5.48392860526698,1.1270773567308,5.7022371796688,6.0125271021964,6.17195215034803,4.36332106157375,2.65698266363284,2.04098346193787,2.83813477020141,2.66807364378434,6.84064933435986,11.596980711679,8.54476027062444,8.92584534109413,12.3000351473733,10.4396599230382,9.20627639842594,5.35046248357617,3.84385978463314,24.4405951096503,4.09355042435354,3.12037673114561,3.03094653536534,1.97337154874103,4.82443521363367,4.43407656399851,6.63219941196697,6.35563408123901,4.92260748748046,4.22442446919304,4.69017520837084,4.76087281772027,7.80534591431195,5.2019597555043,8.41565820665345,6.85655505227195,6.55453258862952,7.9435091658312,6.36455857758651,0,2.17562273527484,2.95058563811422,3.31124095565679,21.0321272884007,22.1530087659264,2.62295912602681,5.30188947129183,8.83423014365519,5.46614242015294,10.9865932843727,7.40803273652911,8.24355094104858,9.6246020468203,8.09621403349789,6.42962887404886,9.09161889277004,19.6006003017302,6.24536374916382,6.05423052468668,7.4928001302645,5.27904393512113,3.98235415019888,5.82673526771955,5.74414758233027,4.14931175462976,7.08724542913855,4.30409207121498,5.16856586336442,6.18007340111759,5.34746067577082,4.42451461110142,2.10837217149998,3.09406629744561,6.46835250932197,6.12207719706455,6.07985813778946,8.3591443662321,7.27094957933322,8.56170324489939,4.93647061806363,10.9607381681256,10.7948985709307,14.8282449604674,5.07215315526412,3.95727007059552,3.55221738730992,4.88534691918062,5.13301079213487,5.41664969158702,3.78925087618806,16.1320012749143,9.22702756308404,4.95328483111734,5.55583582109135,10.360265135258,9.15851325730869,15.0993594316305,1.18984900995699,2.37917468950219,2.3493995546752,4.77335309007557,6.64305586520384,5.48962561242491,4.21220829205025,2.71814784818809,3.05707589244649,2.56242258131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| ||
|short_description=p2@Ube2o | |short_description=p2@Ube2o | ||
}} | }} |
Latest revision as of 00:24, 27 September 2015
Short description: | p2@Ube2o |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ube2o_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -28bp_to_ENSMUST00000082152, NM_173755, uc007mln.1_5end |
EntrezGene: | Ube2o |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.96e-13 | 33 |
neuronal stem cell | 4.96e-13 | 33 |
neuroblast | 4.96e-13 | 33 |
electrically signaling cell | 4.96e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.72e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-12 | 23 |
electrically responsive cell | 7.72e-12 | 39 |
electrically active cell | 7.72e-12 | 39 |
neural cell | 6.00e-11 | 43 |
ectodermal cell | 8.19e-11 | 44 |
neurectodermal cell | 8.19e-11 | 44 |