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FFCP PHASE1:Mm9::chr4:126430616..126430684,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=26562
|EntrezGene=26562
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9Z0E0
|UniProt=Q9Z0E0
|association_with_transcript=0bp_to_ENSMUST00000030637,ENSMUST00000106116,ENSMUST00000127079,NM_011986,uc008utt.2,uc008utu.2_5end
|association_with_transcript=0bp_to_ENSMUST00000030637,ENSMUST00000106116,ENSMUST00000127079,NM_011986,uc008utt.2,uc008utu.2_5end
|cluster_id=chr4:126430616..126430684,-
|description=CAGE_peak_1_at_Ncdn_5end
|description=CAGE_peak_1_at_Ncdn_5end
|id=chr4:126430616..126430684,-
|id=chr4:126430616..126430684,-
|ontology_enrichment_celltype=CL:0000221!3.23e-16!44;CL:0000133!3.23e-16!44;CL:0002319!3.28e-16!43;CL:0000540!7.98e-14!33;CL:0000047!7.98e-14!33;CL:0000031!7.98e-14!33;CL:0000404!7.98e-14!33;CL:0000117!1.97e-12!23;CL:0000337!1.97e-12!23;CL:0000055!7.49e-12!50;CL:0000393!2.54e-10!39;CL:0000211!2.54e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.23e-16,44;CL:0000133,3.23e-16,44;CL:0002319,3.28e-16,43;CL:0000540,7.98e-14,33;CL:0000047,7.98e-14,33;CL:0000031,7.98e-14,33;CL:0000404,7.98e-14,33;CL:0000117,1.97e-12,23;CL:0000337,1.97e-12,23;CL:0000393,2.54e-10,39;CL:0000211,2.54e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.29e-32!73;UBERON:0005743!4.29e-32!73;UBERON:0000073!6.76e-32!75;UBERON:0001016!6.76e-32!75;UBERON:0004121!5.51e-25!102;UBERON:0000924!5.51e-25!102;UBERON:0006601!5.51e-25!102;UBERON:0001049!3.75e-24!52;UBERON:0005068!3.75e-24!52;UBERON:0006241!3.75e-24!52;UBERON:0007135!3.75e-24!52;UBERON:0000955!2.33e-23!50;UBERON:0006238!2.33e-23!50;UBERON:0002346!3.60e-23!71;UBERON:0003075!3.60e-23!71;UBERON:0007284!3.60e-23!71;UBERON:0002616!1.16e-22!49;UBERON:0000033!7.32e-21!63;UBERON:0002020!1.24e-19!34;UBERON:0000153!2.07e-19!94;UBERON:0007811!1.22e-18!86;UBERON:0003080!1.95e-17!40;UBERON:0002791!7.17e-17!29;UBERON:0003528!7.17e-17!29;UBERON:0001893!7.17e-17!29;UBERON:0002780!9.03e-17!39;UBERON:0001890!9.03e-17!39;UBERON:0006240!9.03e-17!39;UBERON:0003056!2.90e-16!49;UBERON:0000956!1.53e-12!21;UBERON:0001869!1.53e-12!21;UBERON:0000203!1.53e-12!21;UBERON:0002619!8.72e-11!17;UBERON:0002021!7.61e-08!10;UBERON:0000411!7.61e-08!10;UBERON:0001950!7.61e-08!10;UBERON:0003076!2.39e-07!12;UBERON:0003057!2.39e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.29e-32,73;UBERON:0001016,6.76e-32,75;UBERON:0000073,1.22e-25,54;UBERON:0004121,5.43e-25,95;UBERON:0000924,5.43e-25,95;UBERON:0006601,5.43e-25,95;UBERON:0001049,3.75e-24,52;UBERON:0005068,3.75e-24,52;UBERON:0006241,3.75e-24,52;UBERON:0007135,3.75e-24,52;UBERON:0002346,9.67e-24,64;UBERON:0003075,9.67e-24,64;UBERON:0007284,9.67e-24,64;UBERON:0000955,2.79e-21,47;UBERON:0006238,2.79e-21,47;UBERON:0002616,1.34e-20,46;UBERON:0002020,1.24e-19,34;UBERON:0010371,8.94e-19,73;UBERON:0003080,1.95e-17,40;UBERON:0003528,7.17e-17,29;UBERON:0002791,7.17e-17,29;UBERON:0001893,7.17e-17,29;UBERON:0002780,9.03e-17,39;UBERON:0001890,9.03e-17,39;UBERON:0006240,9.03e-17,39;UBERON:0003056,2.90e-16,49;UBERON:0010314,2.13e-15,92;UBERON:0000956,1.53e-12,21;UBERON:0001869,1.53e-12,21;UBERON:0000203,1.53e-12,21;UBERON:0002619,8.72e-11,17;UBERON:0002021,7.61e-08,10;UBERON:0000411,7.61e-08,10;UBERON:0001950,7.61e-08,10;UBERON:0003076,2.39e-07,12;UBERON:0003057,2.39e-07,12
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233003438,32.3277952731689,31.537559519966,25.9269487057941,29.6973086694802,30.8839353221239,31.8215804542543,23.2962788365786,29.9410588304042,39.1443767244763,20.856638731315,25.2682962814324,23.4951056449079,32.8622508301441,24.1528869903357,28.0467168314692,27.4615938431064,35.1551839078665,35.8618957935931,25.6079168075566,17.5698303817298,33.4971787865869,35.8823631063591,31.6349748067668,27.9329769402259,26.3169242631198,28.0140710241584,27.4045624905529,28.3563892175188,28.6744717852739,30.2541022420349,29.6428984302311,32.9407636900363,24.245384093363,36.1149627741048,25.6205333485189,23.7524970110249,18.7501960313804,16.1169231709515,41.1493835288566,37.161130139334,30.7694728769005,26.152942247646,168.528226955882,957.254373235928,922.95209919689,1000.27556646519,1117.561244781,928.971896808991,1005.42927742569,853.903462793234,820.034911071305,812.937481717663,814.954730697365,41.099789643334,49.0800594283268,36.1955244198764,44.9747426576344,52.8225169822515,48.3508427223537,49.7832670275618,39.5587309898677,56.1608616785677,45.7381953292473,51.9632564774992,42.2523004704811,45.8843386602424,43.601128787716,41.4109731169972,43.3427259067597,46.7013833557768,33.373295140221,50.6865657988067,41.5100954779,43.8872643053332,46.6761370199058,37.1960456317821,43.1678857398016,45.266611979774,43.2380646326467,39.5124421405189,44.7218509444333,41.6918629506796,40.4022435593572,47.9285473221664,38.7122615735964,52.3815735257202,40.903326073095,50.9273452990213,102.17252637662,42.8094843455097,50.7095687553984,46.8656413568666,36.6181755738396,37.3307215348879
|phase1_expression=31.869620573854,23.0323769041978,29.1199513209303,11.1911758183527,12.0214975187123,26.1891664182548,28.2671295120586,44.4184232639022,78.8416844049334,78.1775517915458,62.3233404340838,64.9345374222038,52.0450218990865,58.8339308279852,28.3143297543313,21.4623783433216,10.4934281719222,28.3915948822414,31.3992052957142,24.6145998042858,162.772857349148,37.5319795539346,31.8663742749501,35.3583254373429,33.9525735979412,19.5238867799107,21.5380998079537,30.1659725760245,15.9619672343354,13.6096270070363,28.6032358745343,59.6928833052053,76.8830984480713,63.3926724061755,14.4425809875637,16.4572298904907,13.4751775133164,17.1597968602132,15.626706890476,17.2762835511353,16.4704816648684,16.3930916390027,19.4204141212461,25.1793635951155,21.2891555560981,22.7597972680485,92.3221786330686,74.1285531693518,84.3594941700372,85.743585491759,37.3763745739718,63.2511283205875,34.2276516357782,58.0289713609076,58.1442272516463,31.6429106324215,28.3668105539369,45.3791441204149,131.708016019598,149.175456154713,136.273751753829,51.1655243424389,42.6861502133347,58.0435317646502,85.0425071807598,65.3641705750412,79.6936293978957,98.7441044676395,70.5089363697648,92.8840855722032,86.2332341540666,389.342291742384,367.525252143485,86.7234858441875,68.0502844229478,139.721255564723,883.129365615097,943.098679097197,816.418724256934,117.642568655333,112.529801630964,102.619933999682,690.140373531414,547.005256950793,564.74232378309,270.469041464827,254.987680311193,172.233087942578,34.3039655799324,43.000217700761,35.073603132903,12.9063581547208,96.5559293865006,23.746940432064,31.1892680374881,28.2256938871321,50.5599912474307,43.1188716122486,26.4981724694926,39.9273719196684,42.1121825132275,44.9142670950112,99.3740434855918,85.3280043783997,29.2262905365139,18.4952701796822,26.2872711407687,35.7395543520658,51.26970096214,52.1031908117535,36.2584332941224,44.7564253118848,32.9780161076164,35.5705431704189,41.3912249117681,30.0343153277924,26.6970565153124,29.2090700978222,16.8076004870476,33.9710384889559,16.7839554029899,22.3042616442202,33.550517019262,301.564220921894,319.615674597332,19.9256503062701,25.0413610217373,15.5974710058286,26.9388881394897,884.513725685478,1152.90151910294,207.832298394678,950.123734170983,728.277622476781,852.346558783315,820.129584807515,30.3481304273943,23.2641035040874,41.95197789999,35.3542317889276,32.5301107406759,25.0593293832485,35.6523017014591,33.6071743773645,46.5369654195083,48.9394411488126,43.8524070939531,80.9741550413119,41.8201906289714,42.5488680377593,42.2282697993477,32.8793598641362,45.8777961222236,38.3077383174383,41.1564272815887,24.0831462850377,29.4929538671559,25.9921386185862,26.1430419443945,33.5543751507513,40.8075344367107,28.4498057108403,37.6424129580484,33.4499193970587,28.3851487712776,31.3920825413051,28.4369805483596,23.8201298429026,27.9751744852917,23.4759473633106,24.9691933401236,24.1229979251798,26.5655639502171,23.8887425393462,1520.81690801577,149.829115624238,17.8426142811251,24.5939026997096,32.2065258308203,35.5322107946471,37.1138288607629,34.0845156613449,34.24621875211,29.2947464213341,22.7773949541366,34.9161784014903,28.4008785944305,27.8539060857611,27.2949721966768,28.7622210769351,25.7204279350886,24.0960940637784,25.9845024305722,29.0191222028711,34.9393980586549,32.7878637830956,28.7049681008086,35.2081815849399,29.7844089855252,29.0791991519816,26.8467824608751,29.6153193412321,27.2736416920177,26.1946815974268,24.5698743891504,22.0364870137157,19.6774317746848,13.9882752656402,15.0229252551038,13.5217184601881,25.4552306036806,17.0228076176611,5.75072826109418,14.8856379067401,16.8500343481863,14.6495749209325,16.5045620440159,13.5084185981743,32.5165614693224,22.9284608242287,34.3856100292675,31.572585954185,27.2240688014662,28.141051250225,24.9945822930314,36.0997248536928,32.9457451181939,33.2197034473162,34.2827752613597,26.5458569839496,23.8305274974936,28.4958645405578,25.6345182696763,48.9515115436839,19.6705709207614,22.3508764506833,590.183968795123,482.794937073285,50.491963176016,16.4106102682842,44.8021671571084,55.4423016901227,65.9195597062365,48.7496347823206,45.0053321646436,61.1445306503878,53.0302019194112,58.1589157243511,57.7120155801924,882.02701357786,42.5820255624806,31.3395462454369,32.0887309926545,42.3973216039416,22.5666735177937,25.977528068583,26.9067965698628,28.2907619633847,36.9127366100966,36.5847826053274,28.6855405416725,26.1744285223804,27.8067955140083,32.2357493094532,28.4630243152497,19.5957532171555,49.3637428342993,28.449652856947,41.2654201266987,32.1505552547388,30.8572006537556,40.8464592308742,49.5292552012384,85.859115650317,22.5284839741162,23.9370240076117,115.777408978855,29.0199805177005,37.2982825667542,25.5123672446099,27.4556391207214,23.8004304630339,24.7758711135373,577.599815762738,21.7006018613273,35.9113150256007,34.075793036027,19.0252141574738,24.1948783066215,18.3022538565218,22.9470880491705,26.3108730368477,29.98939431556,28.6401185404534,34.4806233003438,32.3277952731689,31.537559519966,25.9269487057941,29.6973086694802,30.8839353221239,31.8215804542543,23.2962788365786,29.9410588304042,39.1443767244763,20.856638731315,25.2682962814324,23.4951056449079,32.8622508301441,24.1528869903357,28.0467168314692,27.4615938431064,35.1551839078665,35.8618957935931,25.6079168075566,17.5698303817298,33.4971787865869,35.8823631063591,31.6349748067668,27.9329769402259,26.3169242631198,28.0140710241584,27.4045624905529,28.3563892175188,28.6744717852739,30.2541022420349,29.6428984302311,32.9407636900363,24.245384093363,36.1149627741048,25.6205333485189,23.7524970110249,18.7501960313804,16.1169231709515,41.1493835288566,37.161130139334,30.7694728769005,26.152942247646,168.528226955882,957.254373235928,922.95209919689,1000.27556646519,1117.561244781,928.971896808991,1005.42927742569,853.903462793234,820.034911071305,812.937481717663,814.954730697365,41.099789643334,49.0800594283268,36.1955244198764,44.9747426576344,52.8225169822515,48.3508427223537,49.7832670275618,39.5587309898677,56.1608616785677,45.7381953292473,51.9632564774992,42.2523004704811,45.8843386602424,43.601128787716,41.4109731169972,43.3427259067597,46.7013833557768,33.373295140221,50.6865657988067,41.5100954779,43.8872643053332,46.6761370199058,37.1960456317821,43.1678857398016,45.266611979774,43.2380646326467,39.5124421405189,44.7218509444333,41.6918629506796,40.4022435593572,47.9285473221664,38.7122615735964,52.3815735257202,40.903326073095,50.9273452990213,102.17252637662,42.8094843455097,50.7095687553984,46.8656413568666,36.6181755738396,37.3307215348879
|short_description=p1@Ncdn
|short_description=p1@Ncdn
}}
}}

Latest revision as of 08:36, 26 September 2015

Short description:p1@Ncdn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ncdn_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000030637, ENSMUST00000106116, ENSMUST00000127079, NM_011986, uc008utt.2, uc008utu.2_5end
EntrezGene:Ncdn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ncdn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G731.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I523.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I629.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E944.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E778.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F278.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E662.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F164.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E452.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E858.83
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.46
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.39
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A431.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3162.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H237.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D135.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D233.95
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I121.54
GP2+ M cell, pool3.CNhs13240.11847-124I230.17
Ileum epithelium, pool1.CNhs13199.10252-104B915.96
Ileum epithelium, pool2.CNhs13232.10253-104C113.61
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I359.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G676.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.76
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B792.32
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C274.13
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B884.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C385.74
Mouse Astrocytes, donor2.CNhs12078.11552-120C437.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C463.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I958.03
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A158.14
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C131.64
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.37
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C545.38
Mouse Granule cells, donor1.CNhs12131.11713-123C3131.71
Mouse Granule cells, donor2.CNhs12357.11731-123E3149.18
Mouse Granule cells, donor3.CNhs12108.11636-122C7136.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C651.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D142.69
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C758.04
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E785.04
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D265.36
Mouse Microglia, donor1.CNhs12629.11718-123C879.69
Mouse Microglia, donor2.CNhs12634.11736-123E898.74
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D570.51
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F592.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D986.23
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1389.34
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5367.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D286.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F268.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6139.72
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3883.13
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3943.10
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7816.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4117.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4112.53
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8102.62
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4690.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5547.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6564.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6270.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6254.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1172.23
Mouse Schwann, donor1.CNhs12507.11728-123D934.30
Mouse Schwann, donor2.CNhs12573.11746-123F943.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G335.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C496.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.75
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F628.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A750.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I743.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E326.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I839.93
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G642.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H144.91
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I899.37
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G129.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.29
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.74
accessory axillary lymph node, adult.CNhs10475.1063-29H951.27
adrenal gland, adult.CNhs10508.49-24D752.10
adrenal gland, embryo E14.CNhs11038.406-44C536.26
adrenal gland, embryo E16.CNhs11004.1254-43D644.76
adrenal gland, embryo E17.CNhs11043.1263-45I132.98
adrenal gland, embryo E18.CNhs11026.1262-18F535.57
adrenal gland, neonate N00.CNhs11191.1311-23C141.39
adrenal gland, neonate N25.CNhs11223.1377-27I330.03
amnion, adult pregnant day17.5.CNhs10488.583-22A826.70
aorta, adult.CNhs10498.46-23H129.21
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F533.97
bone (os femoris), neonate N16.CNhs11225.1525-43A616.78
bone (os femoris), neonate N20.CNhs11195.1350-25C322.30
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B2301.56
cerebellum, neonate N30.CNhs11135.1395-42I2319.62
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D426.94
corpora quadrigemina, adult.CNhs10501.16-22A4884.51
corpus striatum, adult.CNhs10487.19-21D81152.90
corpus striatum, neonate N00.CNhs11226.630-43F1207.83
cortex, adult.CNhs10473.12-14D5950.12
cortex, neonate N30.CNhs11107.1392-42F2728.28
diencephalon, adult.CNhs10482.20-12F2852.35
diencephalon, neonate N30.CNhs11201.1388-42B2820.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A223.26
epididymis, adult.CNhs10490.58-23B241.95
eyeball, adult.CNhs10484.31-12G435.35
eyeball, embryo E12.CNhs11016.345-16C632.53
eyeball, embryo E14.CNhs10521.399-16E225.06
eyeball, embryo E15.CNhs10593.426-16C935.65
eyeball, embryo E17.CNhs11023.1261-18D433.61
eyeball, neonate N00.CNhs11207.633-15C646.54
eyeball, neonate N01.CNhs11140.1532-43E748.94
eyeball, neonate N02.CNhs11205.1551-44G843.85
eyeball, neonate N16.CNhs11188.777-19A280.97
forelimb, embryo E11.CNhs10596.335-25E241.82
forelimb, embryo E12.CNhs10600.359-14H242.55
forelimb, embryo E13.CNhs10589.384-1E242.23
forelimb, embryo E14.CNhs10577.413-26A832.88
forelimb, embryo E15.CNhs11007.437-20E745.88
forelimb, embryo E17.CNhs10598.1517-43C438.31
forelimb, embryo E18.CNhs11008.1520-43B541.16
gonad, embryo E13.CNhs11044.1564-45I624.08
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C829.49
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.99
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.14
heart, embryo E11.CNhs10586.331-24E933.55
heart, embryo E12.CNhs11015.353-12F540.81
heart, embryo E13.CNhs11013.376-3I928.45
heart, embryo E14.CNhs10597.403-26D437.64
heart, embryo E15.CNhs11017.431-16C833.45
heart, embryo E16.CNhs11021.457-17C628.39
heart, embryo E17.CNhs11025.479-18E531.39
heart, embryo E18.CNhs11030.1283-20G328.44
heart, neonate N00.CNhs11213.639-21E323.82
heart, neonate N03.CNhs11221.1349-25I227.98
heart, neonate N10.CNhs11118.749-24G123.48
heart, neonate N16.CNhs11209.782-15G124.97
heart, neonate N20.CNhs11127.821-26I624.12
heart, neonate N25.CNhs11196.1351-25D326.57
heart, neonate N30.CNhs11202.1390-42D223.89
hippocampus, adult.CNhs10478.13-16E81520.82
hippocampus, neonate N00.CNhs11228.627-43G1149.83
intestinal mucosa, adult.CNhs10506.860-29I317.84
intestine, adult.CNhs10496.178-9A324.59
intestine, embryo E12.CNhs11019.1251-16I532.21
intestine, embryo E13.CNhs11010.381-16D535.53
intestine, embryo E15.CNhs10602.976-16D837.11
intestine, embryo E16.CNhs10585.463-22H434.08
intestine, embryo E17.CNhs10582.482-18D334.25
intestine, embryo E18.CNhs10526.1289-20F729.29
intestine, neonate N00.CNhs11126.644-26D122.78
intestine, neonate N01.CNhs11192.1322-23E934.92
intestine, neonate N06.CNhs11102.688-20B828.40
intestine, neonate N07.CNhs11095.720-20F227.85
intestine, neonate N10.CNhs11098.755-23A527.29
intestine, neonate N20.CNhs11187.827-18D128.76
intestine, neonate N25.CNhs11121.1352-25E325.72
intestine, neonate N30.CNhs11131.1384-42G124.10
kidney, embryo E14.CNhs10606.411-4I925.98
kidney, embryo E15.CNhs10997.434-16F829.02
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I232.79
kidney, embryo E18.CNhs11001.1288-20C728.70
kidney, neonate N00.CNhs11214.646-21G735.21
kidney, neonate N10.CNhs11206.758-6D529.78
kidney, neonate N20.CNhs11113.832-19I129.08
kidney, neonate N25.CNhs11122.1353-25F326.85
kidney, neonate N30.CNhs11203.1385-42H129.62
liver, adult pregnant day01.CNhs10466.508-5B227.27
liver, embryo E12.CNhs10601.355-15F826.19
liver, embryo E13.CNhs10524.378-3H624.57
liver, embryo E14.CNhs10594.409-16E122.04
liver, embryo E15.CNhs10520.433-16D719.68
liver, embryo E16.CNhs10523.462-17F513.99
liver, embryo E17.CNhs10510.481-18A315.02
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F425.46
liver, neonate N03.CNhs11123.1345-25G217.02
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B916.85
liver, neonate N20.CNhs11220.823-25A314.65
liver, neonate N25.CNhs11198.1368-26H116.50
liver, neonate N30.CNhs11106.1382-42D113.51
lung, adult.CNhs10474.28-22B132.52
lung, embryo E12.CNhs10522.354-16G222.93
lung, embryo E14.CNhs10604.404-26F834.39
lung, embryo E15.CNhs11020.432-17C531.57
lung, embryo E16.CNhs10998.458-17B627.22
lung, embryo E17.CNhs10605.480-44A628.14
lung, embryo E18.CNhs10583.1287-20I624.99
lung, neonate N00.CNhs11224.640-42C636.10
lung, neonate N06.CNhs11212.683-20E532.95
lung, neonate N07.CNhs11111.715-19A333.22
lung, neonate N10.CNhs11219.750-23E634.28
lung, neonate N20.CNhs11109.822-18A426.55
lung, neonate N25.CNhs11119.1359-25C723.83
lung, neonate N30.CNhs11133.1394-42H228.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A148.95
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H222.35
medulla oblongata, adult.CNhs10477.17-12C2590.18
medulla oblongata, neonate N30.CNhs11200.1396-42A3482.79
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C750.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.41
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E144.80
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E255.44
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E365.92
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D748.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D845.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D961.14
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D453.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D558.16
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D657.71
olfactory brain, adult.CNhs10489.18-22I9882.03
ovary, adult.CNhs10507.91-2I742.58
ovary, embryo E18.CNhs11040.505-44H731.34
ovary, neonate N00.CNhs11217.1299-22I432.09
oviduct, adult pregnant day01.CNhs10500.988-6G642.40
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F425.98
pancreas, embryo E15.CNhs11042.1556-45F226.91
pancreas, embryo E16.CNhs11003.460-26E528.29
pancreas, embryo E17.CNhs10599.1558-45G336.91
pancreas, embryo E18.CNhs10580.1535-43I736.58
pancreas, neonate N00.CNhs11105.645-26G928.69
pancreas, neonate N01.CNhs11138.1531-43D726.17
pancreas, neonate N02.CNhs11139.1539-43D827.81
pancreas, neonate N16.CNhs11136.787-43B632.24
pancreas, neonate N25.CNhs11094.1555-45E228.46
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G849.36
pituitary gland, embryo E12.CNhs11018.346-16E628.45
pituitary gland, embryo E13.CNhs11009.370-44C741.27
pituitary gland, embryo E14.CNhs11037.398-44A532.15
pituitary gland, embryo E15.CNhs10592.427-16B930.86
pituitary gland, embryo E16.CNhs11036.449-43F640.85
pituitary gland, embryo E17.CNhs11039.1265-44F549.53
pituitary gland, neonate N00.CNhs11190.1308-22E985.86
placenta, adult pregnant day10.CNhs10472.539-13I722.53
placenta, adult pregnant day17.CNhs10464.577-18G323.94
prostate, adult.CNhs10470.859-1F8115.78
skin, adult.CNhs10492.30-1C329.02
skin, neonate N00.CNhs11124.650-25G437.30
skin, neonate N03.CNhs11215.662-22H325.51
skin, neonate N06.CNhs11097.693-20I527.46
skin, neonate N10.CNhs11108.762-6C423.80
small intestine, neonate N16.CNhs11114.790-21I124.78
spinal cord, adult.CNhs10505.24-13C9577.60
spleen, adult.CNhs10465.25-2G221.70
spleen, embryo E16.CNhs11035.461-43C135.91
spleen, embryo E18.CNhs11011.1271-21F234.08
spleen, neonate N10.CNhs11116.752-24D119.03
spleen, neonate N20.CNhs11112.824-19H124.19
spleen, neonate N25.CNhs11099.1354-25G318.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.99
stomach, adult.CNhs10503.33-1H628.64
stomach, embryo E12.CNhs10588.356-43E334.48
stomach, embryo E15.CNhs10603.1252-16G832.33
stomach, embryo E16.CNhs11022.459-17D431.54
stomach, embryo E17.CNhs11006.1035-18D525.93
stomach, embryo E18.CNhs10999.1286-20C629.70
stomach, neonate N03.CNhs11193.1340-24B830.88
stomach, neonate N07.CNhs11210.718-18A931.82
stomach, neonate N25.CNhs11104.1355-25E423.30
stomach, neonate N30.CNhs11134.1386-42I129.94
submandibular gland, adult.CNhs10469.59-29C139.14
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F525.27
testis, embryo E15.CNhs11034.443-27C523.50
testis, embryo E16.CNhs11033.470-26G532.86
testis, embryo E17.CNhs11029.486-18I524.15
testis, embryo E18.CNhs11027.503-18G528.05
testis, neonate N00.CNhs11189.1300-22B727.46
testis, neonate N07.CNhs11222.726-26I435.16
testis, neonate N10.CNhs11204.763-44D935.86
testis, neonate N20.CNhs11110.839-18H325.61
testis, neonate N30.CNhs11130.1391-42E217.57
thymus, adult.CNhs10471.38-12B533.50
thymus, embryo E14.CNhs11041.402-44I435.88
thymus, embryo E15.CNhs11005.430-45I231.63
thymus, embryo E16.CNhs11002.456-26C527.93
thymus, embryo E17.CNhs10581.478-18C126.32
thymus, embryo E18.CNhs10595.1273-19G428.01
thymus, neonate N02.CNhs11181.1541-43F827.40
thymus, neonate N03.CNhs11137.2104-43C728.36
thymus, neonate N06.CNhs11197.681-26C428.67
thymus, neonate N07.CNhs11211.713-19D330.25
thymus, neonate N10.CNhs11194.748-24E429.64
thymus, neonate N20.CNhs11186.820-7A232.94
thymus, neonate N25.CNhs11125.1362-25G724.25
thymus, neonate N30.CNhs11132.1393-42G236.11
tongue, adult.CNhs10499.32-1B425.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.75
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F718.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.12
urinary bladder, adult.CNhs10481.879-12E441.15
uterus, adult pregnant day19.CNhs10497.590-15F537.16
uterus, adult.CNhs10509.92-27E530.77
vagina, adult.CNhs10502.89-27D526.15
vesicular gland, adult.CNhs10491.51-27F8168.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1957.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2922.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31000.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71117.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4928.97
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51005.43
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6853.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7820.03
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8812.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9814.95
whole body, embryo E11.CNhs11014.324-5I841.10
whole body, embryo E12.CNhs10587.857-27C949.08
whole body, embryo E13.CNhs10512.372-23H236.20
whole body, embryo E14.5.CNhs10578.420-27D244.97
whole body, embryo E14.CNhs10519.395-14B152.82
whole body, embryo E16.CNhs10514.453-14F248.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G549.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G539.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G556.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G545.74
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G551.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G542.25
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G545.88
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G543.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G541.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G543.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G546.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G533.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G550.69
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G541.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G543.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G546.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G537.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G543.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G545.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G543.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G539.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G544.72
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G541.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G540.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G547.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G538.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G552.38
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G540.90
whole body, embryo E17.5.CNhs10513.490-9F950.93
whole body, embryo E17.CNhs10517.475-3I5102.17
whole body, embryo E18.CNhs10516.493-3B342.81
whole body, neonate N00.CNhs10525.657-19C250.71
whole body, neonate N01.CNhs10576.659-23C646.87
whole body, neonate N06.CNhs10515.692-21D136.62
whole body, neonate N10.CNhs10518.761-6B437.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.23e-1644
neurectodermal cell3.23e-1644
neural cell3.28e-1643
neuron7.98e-1433
neuronal stem cell7.98e-1433
neuroblast7.98e-1433
electrically signaling cell7.98e-1433
CNS neuron (sensu Vertebrata)1.97e-1223
neuroblast (sensu Vertebrata)1.97e-1223
electrically responsive cell2.54e-1039
electrically active cell2.54e-1039

Uber anatomy
Ontology termp-valuen
central nervous system4.29e-3273
nervous system6.76e-3275
regional part of nervous system1.22e-2554
ectoderm-derived structure5.43e-2595
ectoderm5.43e-2595
presumptive ectoderm5.43e-2595
neural tube3.75e-2452
neural rod3.75e-2452
future spinal cord3.75e-2452
neural keel3.75e-2452
neurectoderm9.67e-2464
neural plate9.67e-2464
presumptive neural plate9.67e-2464
brain2.79e-2147
future brain2.79e-2147
regional part of brain1.34e-2046
gray matter1.24e-1934
ecto-epithelium8.94e-1973
anterior neural tube1.95e-1740
brain grey matter7.17e-1729
regional part of telencephalon7.17e-1729
telencephalon7.17e-1729
regional part of forebrain9.03e-1739
forebrain9.03e-1739
future forebrain9.03e-1739
pre-chordal neural plate2.90e-1649
structure with developmental contribution from neural crest2.13e-1592
cerebral cortex1.53e-1221
cerebral hemisphere1.53e-1221
pallium1.53e-1221
regional part of cerebral cortex8.72e-1117
occipital lobe7.61e-0810
visual cortex7.61e-0810
neocortex7.61e-0810
posterior neural tube2.39e-0712
chordal neural plate2.39e-0712
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