Personal tools

FFCP PHASE1:Mm9::chr2:11093788..11093799,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18761
|EntrezGene=18761
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=B1AYX8
|UniProt=B1AYX8
|association_with_transcript=48bp_to_ENSMUST00000114853_5end
|association_with_transcript=48bp_to_ENSMUST00000114853_5end
|cluster_id=chr2:11093788..11093799,+
|description=CAGE_peak_11_at_Prkcq_5end
|description=CAGE_peak_11_at_Prkcq_5end
|id=chr2:11093788..11093799,+
|id=chr2:11093788..11093799,+
|ontology_enrichment_celltype=CL:0000791!7.55e-08!9;CL:0000789!7.55e-08!9;CL:0002420!7.55e-08!9;CL:0002419!7.55e-08!9;CL:0000790!7.55e-08!9;CL:0000624!3.19e-07!8
|ontology_enrichment_celltype=CL:0000791!7.55e-08!9;CL:0000789!7.55e-08!9;CL:0002420!7.55e-08!9;CL:0002419!7.55e-08!9;CL:0000790!7.55e-08!9;CL:0000624!3.19e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000624,1.05e-17,8;CL:0000893,1.08e-16,6;CL:0002489,1.08e-16,6;CL:0000898,1.08e-16,6;CL:0000809,1.08e-16,6;CL:0000810,1.08e-16,6;CL:0000895,1.08e-16,6;CL:0000808,1.08e-16,6;CL:0000894,1.08e-16,6;CL:0000806,1.08e-16,6;CL:0000807,1.08e-16,6;CL:0000805,1.08e-16,6;CL:0002425,1.08e-16,6;CL:0002436,1.08e-16,6;CL:0002427,1.08e-16,6;CL:0002428,1.08e-16,6;CL:0002429,1.08e-16,6;CL:0002433,1.08e-16,6;CL:0002431,1.08e-16,6;CL:0002432,1.08e-16,6;CL:0000791,1.09e-15,9;CL:0000789,1.09e-15,9;CL:0002420,1.09e-15,9;CL:0002419,1.09e-15,9;CL:0000790,1.09e-15,9;CL:0000084,9.38e-13,11;CL:0000827,9.38e-13,11;CL:0000838,1.19e-11,12;CL:0000542,1.02e-10,13;CL:0000051,1.02e-10,13;CL:0000738,4.46e-08,17;CL:0002087,4.46e-08,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003408!1.33e-14!24;UBERON:0006562!3.63e-14!24;UBERON:0001557!3.63e-14!24;UBERON:0001042!3.63e-14!24;UBERON:0008814!3.63e-14!24;UBERON:0009145!3.63e-14!24;UBERON:0002370!5.64e-14!23;UBERON:0000974!5.64e-14!23;UBERON:0004807!5.64e-14!23;UBERON:0005058!5.64e-14!23;UBERON:0003351!5.64e-14!23;UBERON:0009113!5.64e-14!23;UBERON:0003295!5.64e-14!23;UBERON:0009722!5.64e-14!23;UBERON:0005562!5.64e-14!23;UBERON:0007690!5.64e-14!23;UBERON:0000153!1.11e-12!94;UBERON:0007811!2.67e-12!86;UBERON:0004177!9.89e-12!29;UBERON:0000072!1.62e-11!27;UBERON:0000063!1.77e-10!35;UBERON:0001004!5.15e-09!42;UBERON:0000065!1.66e-08!41
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.59e-61,23;UBERON:0000974,2.59e-61,23;UBERON:0004807,2.59e-61,23;UBERON:0005058,2.59e-61,23;UBERON:0003351,2.59e-61,23;UBERON:0009113,2.59e-61,23;UBERON:0003295,2.59e-61,23;UBERON:0009722,2.59e-61,23;UBERON:0005562,2.59e-61,23;UBERON:0007690,2.59e-61,23;UBERON:0006562,1.22e-58,24;UBERON:0003408,1.22e-58,24;UBERON:0001557,1.22e-58,24;UBERON:0001042,1.22e-58,24;UBERON:0008814,1.22e-58,24;UBERON:0009145,1.22e-58,24;UBERON:0000072,8.30e-52,27;UBERON:0004177,4.91e-48,29;UBERON:0005057,4.91e-48,29;UBERON:0000077,2.66e-39,35;UBERON:0007811,3.96e-38,36;UBERON:0000065,4.06e-33,41;UBERON:0001004,2.94e-32,42;UBERON:0000153,1.94e-31,43;UBERON:0002390,6.57e-30,45;UBERON:0003061,6.57e-30,45;UBERON:0002193,7.50e-28,48;UBERON:0002405,7.50e-28,48;UBERON:0003929,6.39e-24,55;UBERON:0002368,1.13e-21,60;UBERON:0002530,9.10e-20,65;UBERON:0000490,2.02e-19,66;UBERON:0005911,1.93e-18,69;UBERON:0000949,1.53e-17,72;UBERON:0003081,1.09e-15,87;UBERON:0001041,1.79e-15,80;UBERON:0000926,1.82e-10,120;UBERON:0004120,1.82e-10,120;UBERON:0006603,1.82e-10,120;UBERON:0004921,6.72e-10,114;UBERON:0001007,1.13e-09,116;UBERON:0001555,1.13e-09,116;UBERON:0007026,1.13e-09,116;UBERON:0004119,1.88e-09,118;UBERON:0000925,1.88e-09,118;UBERON:0006595,1.88e-09,118;UBERON:0001048,5.07e-09,134
|phase1_expression=0.320297694209588,0,0,0,0,0,0,2.06597317506522,0.281577444303333,2.10658073689794,1.02730780935303,1.03703806693937,2.73921167889929,2.36035086531293,0.666219523631325,0,0,0,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0.883474163806454,0,0.287536413054709,0,2.20231761998777,0.255374676170375,0.614426133024974,0.263772575460388,0.182975287204819,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0.711858403995515,0.745597783301202,0.075726193333184,0.302286240427142,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0,0.599162557619291,0.457500602818626,0,0,0,0.62336413367868,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.384341160854549,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0.407302655690628,0,0.140271639780637,0.442655759869801,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,0.481651769963376,0.703270119553219,0,1.26235463602186,0,0,0,0,0,0,0,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,0.322928853391811,0,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.849892149969277,0,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.821500670520278,0.13020438484395,0,0,0,2.52808896502543,1.01362607645082,1.95150818613172,1.81889152168913,1.43221356533985,2.58285761215644,2.28371354087941,1.9199638532695,1.9183625490148,3.50551310612999,2.21817607301049,3.31356794515158,2.50150788264857,3.74006086981021,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0,0,0.468207537349412,0,0.287177344778066,0,0.463537303779422,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.338458431566706,0.365855945745545,0,0,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0,0.382576664137687,0.441182838239031,0.927471342481686
|phase1_expression=0.320297694209588,0,0,0,0,0,0,2.06597317506522,0.281577444303333,2.10658073689794,1.02730780935303,1.03703806693937,2.73921167889929,2.36035086531293,0.666219523631325,0,0,0,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0.883474163806454,0,0.287536413054709,0,2.20231761998777,0.255374676170375,0.614426133024974,0.263772575460388,0.182975287204819,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0.711858403995515,0.745597783301202,0.075726193333184,0.302286240427142,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0,0.599162557619291,0.457500602818626,0,0,0,0.62336413367868,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.384341160854549,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0.407302655690628,0,0.140271639780637,0.442655759869801,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,0.481651769963376,0.703270119553219,0,1.26235463602186,0,0,0,0,0,0,0,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,0.322928853391811,0,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.849892149969277,0,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.821500670520278,0.13020438484395,0,0,0,2.52808896502543,1.01362607645082,1.95150818613172,1.81889152168913,1.43221356533985,2.58285761215644,2.28371354087941,1.9199638532695,1.9183625490148,3.50551310612999,2.21817607301049,3.31356794515158,2.50150788264857,3.74006086981021,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0,0,0.468207537349412,0,0.287177344778066,0,0.463537303779422,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.338458431566706,0.365855945745545,0,0,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0,0.382576664137687,0.441182838239031,0.927471342481686
|short_description=p11@Prkcq
|short_description=p11@Prkcq
}}
}}

Latest revision as of 23:01, 1 October 2015

Short description:p11@Prkcq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_11_at_Prkcq_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 48bp_to_ENSMUST00000114853_5end
EntrezGene:Prkcq
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p11@Prkcq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D33.51
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A23.31
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell1.05e-178
thymocyte1.08e-166
double negative thymocyte1.08e-166
naive T cell1.08e-166
double-positive, alpha-beta thymocyte1.08e-166
CD4-positive, alpha-beta thymocyte1.08e-166
naive thymus-derived CD4-positive, alpha-beta T cell1.08e-166
DN4 thymocyte1.08e-166
DN1 thymic pro-T cell1.08e-166
DN2 thymocyte1.08e-166
DN3 thymocyte1.08e-166
immature single positive thymocyte1.08e-166
early T lineage precursor1.08e-166
mature CD4 single-positive thymocyte1.08e-166
resting double-positive thymocyte1.08e-166
double-positive blast1.08e-166
CD69-positive double-positive thymocyte1.08e-166
CD69-positive, CD4-positive single-positive thymocyte1.08e-166
CD4-positive, CD8-intermediate double-positive thymocyte1.08e-166
CD24-positive, CD4 single-positive thymocyte1.08e-166
mature alpha-beta T cell1.09e-159
alpha-beta T cell1.09e-159
immature T cell1.09e-159
mature T cell1.09e-159
immature alpha-beta T cell1.09e-159
T cell9.38e-1311
pro-T cell9.38e-1311
lymphoid lineage restricted progenitor cell1.19e-1112
lymphocyte1.02e-1013
common lymphoid progenitor1.02e-1013
leukocyte4.46e-0817
nongranular leukocyte4.46e-0817

Uber anatomy
Ontology termp-valuen
thymus2.59e-6123
neck2.59e-6123
respiratory system epithelium2.59e-6123
hemolymphoid system gland2.59e-6123
pharyngeal epithelium2.59e-6123
thymic region2.59e-6123
pharyngeal gland2.59e-6123
entire pharyngeal arch endoderm2.59e-6123
thymus primordium2.59e-6123
early pharyngeal endoderm2.59e-6123
pharynx1.22e-5824
gland of gut1.22e-5824
upper respiratory tract1.22e-5824
chordate pharynx1.22e-5824
pharyngeal arch system1.22e-5824
pharyngeal region of foregut1.22e-5824
segment of respiratory tract8.30e-5227
hemopoietic organ4.91e-4829
immune organ4.91e-4829
mixed endoderm/mesoderm-derived structure2.66e-3935
craniocervical region3.96e-3836
respiratory tract4.06e-3341
respiratory system2.94e-3242
anterior region of body1.94e-3143
hematopoietic system6.57e-3045
blood island6.57e-3045
hemolymphoid system7.50e-2848
immune system7.50e-2848
gut epithelium6.39e-2455
endocrine gland1.13e-2160
gland9.10e-2065
unilaminar epithelium2.02e-1966
endo-epithelium1.93e-1869
endocrine system1.53e-1772
lateral plate mesoderm1.09e-1587
foregut1.79e-1580
mesoderm1.82e-10120
mesoderm-derived structure1.82e-10120
presumptive mesoderm1.82e-10120
subdivision of digestive tract6.72e-10114
digestive system1.13e-09116
digestive tract1.13e-09116
primitive gut1.13e-09116
endoderm-derived structure1.88e-09118
endoderm1.88e-09118
presumptive endoderm1.88e-09118
primordium5.07e-09134
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:11093788..11093799,%2B&oldid=4326918"