FFCP PHASE1:Mm9::chr4:150371190..150371197,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=24111 | |EntrezGene=24111 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=353 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QZQ3,Q541G7 | |UniProt=Q9QZQ3,Q541G7 | ||
|association_with_transcript=-8bp_to_ENSMUST00000030803,NM_011910,uc008vyd.1_5end | |association_with_transcript=-8bp_to_ENSMUST00000030803,NM_011910,uc008vyd.1_5end | ||
|cluster_id=chr4:150371190..150371197,+ | |||
|description=CAGE_peak_1_at_Uts2_5end | |description=CAGE_peak_1_at_Uts2_5end | ||
|id=chr4:150371190..150371197,+ | |id=chr4:150371190..150371197,+ | ||
|ontology_enrichment_celltype=CL:0002612!6.66e-11!3;CL:0002611!4.72e-08!2;CL:0000117!5.46e-08!23;CL:0000337!5.46e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.40e-29,3;CL:0002611,5.12e-21,2;CL:0000117,7.49e-11,23;CL:0000337,7.49e-11,23;CL:0000540,1.36e-07,33;CL:0000047,1.36e-07,33;CL:0000031,1.36e-07,33;CL:0000404,1.36e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.60e-20!6;UBERON:0005174!1.60e-20!6;UBERON:0001137!1.60e-20!6;UBERON:0003076!2.38e-17!12;UBERON:0003057!2.38e-17!12;UBERON:0001948!2.61e-17!5;UBERON:0002315!2.61e-17!5;UBERON:0002257!6.66e-11!3;UBERON:0002298!7.19e-09!6;UBERON:0002256!4.72e-08!2;UBERON:0001896!9.31e-08!2;UBERON:0005290!9.31e-08!2;UBERON:0010096!9.31e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.09e-58,6;UBERON:0005174,1.09e-58,6;UBERON:0001137,1.09e-58,6;UBERON:0003076,1.15e-51,12;UBERON:0003057,1.15e-51,12;UBERON:0001948,6.02e-49,5;UBERON:0002315,6.02e-49,5;UBERON:0002257,1.40e-29,3;UBERON:0002256,5.12e-21,2;UBERON:0001896,3.91e-20,2;UBERON:0002298,3.91e-20,2;UBERON:0005290,3.91e-20,2;UBERON:0010096,3.91e-20,2;UBERON:0000489,6.83e-17,21;UBERON:0001049,7.67e-12,52;UBERON:0005068,7.67e-12,52;UBERON:0006241,7.67e-12,52;UBERON:0007135,7.67e-12,52;UBERON:0000996,1.12e-10,1;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0000073,1.05e-08,54;UBERON:0010371,2.39e-08,73;UBERON:0001017,2.39e-08,73;UBERON:0003103,3.12e-08,43;UBERON:0001016,4.08e-08,75;UBERON:0002020,2.26e-07,34;UBERON:0004733,2.36e-07,6;UBERON:0004732,2.36e-07,6;UBERON:0002028,2.36e-07,6;UBERON:0007277,2.36e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.5659846587271,15.4607978666129,0,0,0,0,0.127687338085188,0,0,0,0,0.837548997004143,0,0.15279824777681,11.490514833473,15.0913981647049,1.86399445825301,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,3.28192722458169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3635880533242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.549454872801795,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0.309873682371932,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.5659846587271,15.4607978666129,0,0,0,0,0.127687338085188,0,0,0,0,0.837548997004143,0,0.15279824777681,11.490514833473,15.0913981647049,1.86399445825301,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,3.28192722458169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3635880533242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.549454872801795,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0.309873682371932,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p1@Uts2 | |short_description=p1@Uts2 | ||
}} | }} |
Latest revision as of 18:33, 26 September 2015
Short description: | p1@Uts2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Uts2_5end |
Coexpression cluster: | MCL_coexpression_mm9:353 |
Association with transcript: | -8bp_to_ENSMUST00000030803, NM_011910, uc008vyd.1_5end |
EntrezGene: | Uts2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.40e-29 | 3 |
neuron of the dorsal spinal cord | 5.12e-21 | 2 |
CNS neuron (sensu Vertebrata) | 7.49e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.49e-11 | 23 |
neuron | 1.36e-07 | 33 |
neuronal stem cell | 1.36e-07 | 33 |
neuroblast | 1.36e-07 | 33 |
electrically signaling cell | 1.36e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.09e-58 | 6 |
dorsal region element | 1.09e-58 | 6 |
dorsum | 1.09e-58 | 6 |
posterior neural tube | 1.15e-51 | 12 |
chordal neural plate | 1.15e-51 | 12 |
regional part of spinal cord | 6.02e-49 | 5 |
gray matter of spinal cord | 6.02e-49 | 5 |
ventral horn of spinal cord | 1.40e-29 | 3 |
dorsal horn of spinal cord | 5.12e-21 | 2 |
medulla oblongata | 3.91e-20 | 2 |
brainstem | 3.91e-20 | 2 |
myelencephalon | 3.91e-20 | 2 |
future myelencephalon | 3.91e-20 | 2 |
cavitated compound organ | 6.83e-17 | 21 |
neural tube | 7.67e-12 | 52 |
neural rod | 7.67e-12 | 52 |
future spinal cord | 7.67e-12 | 52 |
neural keel | 7.67e-12 | 52 |
vagina | 1.12e-10 | 1 |
neurectoderm | 1.44e-09 | 64 |
neural plate | 1.44e-09 | 64 |
presumptive neural plate | 1.44e-09 | 64 |
regional part of nervous system | 1.05e-08 | 54 |
ecto-epithelium | 2.39e-08 | 73 |
central nervous system | 2.39e-08 | 73 |
compound organ | 3.12e-08 | 43 |
nervous system | 4.08e-08 | 75 |
gray matter | 2.26e-07 | 34 |
segmental subdivision of hindbrain | 2.36e-07 | 6 |
segmental subdivision of nervous system | 2.36e-07 | 6 |
hindbrain | 2.36e-07 | 6 |
presumptive hindbrain | 2.36e-07 | 6 |