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FFCP PHASE1:Mm9::chr11:74537807..74537831,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18472
|EntrezGene=18472
|HGNC=
|HGNC=
|MCL_coexpression_id=240
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000156794_5end
|association_with_transcript=0bp_to_ENSMUST00000156794_5end
|cluster_id=chr11:74537807..74537831,-
|description=CAGE_peak_2_at_Pafah1b1_5end
|description=CAGE_peak_2_at_Pafah1b1_5end
|id=chr11:74537807..74537831,-
|id=chr11:74537807..74537831,-
|ontology_enrichment_celltype=CL:0000117!2.12e-07!23;CL:0000337!2.12e-07!23
|ontology_enrichment_celltype=CL:0000117!2.12e-07!23;CL:0000337!2.12e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.12e-07,23;CL:0000337,2.12e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!6.78e-11!34;UBERON:0000073!1.09e-10!75;UBERON:0001016!1.09e-10!75;UBERON:0001049!2.56e-10!52;UBERON:0005068!2.56e-10!52;UBERON:0006241!2.56e-10!52;UBERON:0007135!2.56e-10!52;UBERON:0001017!3.36e-10!73;UBERON:0005743!3.36e-10!73;UBERON:0000955!1.22e-09!50;UBERON:0006238!1.22e-09!50;UBERON:0000033!2.22e-09!63;UBERON:0002616!3.12e-09!49;UBERON:0002791!1.27e-08!29;UBERON:0003528!1.27e-08!29;UBERON:0001893!1.27e-08!29;UBERON:0004121!5.89e-08!102;UBERON:0000924!5.89e-08!102;UBERON:0006601!5.89e-08!102;UBERON:0002346!1.12e-07!71;UBERON:0003075!1.12e-07!71;UBERON:0007284!1.12e-07!71;UBERON:0003080!1.13e-07!40;UBERON:0000025!2.01e-07!114;UBERON:0002021!2.05e-07!10;UBERON:0000411!2.05e-07!10;UBERON:0001950!2.05e-07!10;UBERON:0002780!2.39e-07!39;UBERON:0001890!2.39e-07!39;UBERON:0006240!2.39e-07!39;UBERON:0003056!2.40e-07!49;UBERON:0004111!9.59e-07!122
|ontology_enrichment_uberon=UBERON:0002020!6.78e-11!34;UBERON:0000073!1.09e-10!75;UBERON:0001016!1.09e-10!75;UBERON:0001049!2.56e-10!52;UBERON:0005068!2.56e-10!52;UBERON:0006241!2.56e-10!52;UBERON:0007135!2.56e-10!52;UBERON:0001017!3.36e-10!73;UBERON:0005743!3.36e-10!73;UBERON:0000955!1.22e-09!50;UBERON:0006238!1.22e-09!50;UBERON:0000033!2.22e-09!63;UBERON:0002616!3.12e-09!49;UBERON:0002791!1.27e-08!29;UBERON:0003528!1.27e-08!29;UBERON:0001893!1.27e-08!29;UBERON:0004121!5.89e-08!102;UBERON:0000924!5.89e-08!102;UBERON:0006601!5.89e-08!102;UBERON:0002346!1.12e-07!71;UBERON:0003075!1.12e-07!71;UBERON:0007284!1.12e-07!71;UBERON:0003080!1.13e-07!40;UBERON:0000025!2.01e-07!114;UBERON:0002021!2.05e-07!10;UBERON:0000411!2.05e-07!10;UBERON:0001950!2.05e-07!10;UBERON:0002780!2.39e-07!39;UBERON:0001890!2.39e-07!39;UBERON:0006240!2.39e-07!39;UBERON:0003056!2.40e-07!49;UBERON:0004111!9.59e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.77e-11,92;UBERON:0000073,2.21e-11,54;UBERON:0002020,6.78e-11,34;UBERON:0001016,1.09e-10,75;UBERON:0001049,2.56e-10,52;UBERON:0005068,2.56e-10,52;UBERON:0006241,2.56e-10,52;UBERON:0007135,2.56e-10,52;UBERON:0001017,3.36e-10,73;UBERON:0002346,1.22e-09,64;UBERON:0003075,1.22e-09,64;UBERON:0007284,1.22e-09,64;UBERON:0004121,1.66e-09,95;UBERON:0000924,1.66e-09,95;UBERON:0006601,1.66e-09,95;UBERON:0010371,3.84e-09,73;UBERON:0003528,1.27e-08,29;UBERON:0002791,1.27e-08,29;UBERON:0001893,1.27e-08,29;UBERON:0000955,3.29e-08,47;UBERON:0006238,3.29e-08,47;UBERON:0002616,8.02e-08,46;UBERON:0003080,1.13e-07,40;UBERON:0000025,2.01e-07,114;UBERON:0002021,2.05e-07,10;UBERON:0000411,2.05e-07,10;UBERON:0001950,2.05e-07,10;UBERON:0002780,2.39e-07,39;UBERON:0001890,2.39e-07,39;UBERON:0006240,2.39e-07,39;UBERON:0003056,2.40e-07,49;UBERON:0004111,9.59e-07,122
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3,7.86105229486239,10.6542833644008,9.33984049696296,13.6113089831695,9.72112299688447,3.72803587852155,2.25477175473676,9.71857549285862,6.45288112782681,10.3059129822345,8.26622870257479,7.94093789806657,11.1489376713466,11.7183946359555,10.2762157537197,5.07326653734613,4.32045009386798,3.16011120628178,7.09538253515575,6.88163413004343,6.88580361782314,4.11761400035207,5.16571522431289,6.37035882455835,8.12292399460175,6.15895344683701,6.55378537232999,4.63800451629466,4.77543615624787,5.8689223400601,6.19447581562315,12.0167103316062,4.43971906748129,2.87084341150322,6.37961542183498,7.92077335531981,5.63047426353546,5.86085197655248,7.93163002592544,4.51414893631827,37.2736216127264,53.8580526713397,41.821372481076,26.2935368985842,33.5690434687615,40.0358765616541,41.851395014372,24.3173449741079,26.2822597210839,28.9945774581019,11.5203955818436,11.5717213286299,6.65861062441123,9.48116196566347,11.738337107167,11.2144540154509,7.55638874525492,9.06554251851134,7.38114182061175,6.57012750585873,7.85785829659743,9.61994341068989,9.92599979180754,11.5885525852813,11.5445292600783,9.0495801343784,12.1678542242098,12.9249177710682,13.5988347265091,9.86232764900462,7.20025430009372,9.22874192028555,9.0605752179982,9.59286349773368,11.4813444106703,9.81529451543447,13.3537420197124,9.73357932320019,11.0001332215148,7.2948495315506,12.2194068667899,12.411564779321,15.9600106836179,10.2258315182738,10.0311437710194,10.4920442733937,8.4215379040347,11.1732948105115,7.07766828654721,7.50010825006353,7.88350641109433
|phase1_expression=17.9366708757369,56.1850406299371,50.959914811628,41.4375969490357,57.1021132138836,11.0800319461847,9.57811826441655,5.29405626110463,13.3749286044083,11.2350972634557,2.39705155515707,3.03134204182278,4.45121897821135,4.80812213304486,11.9919514253639,27.7391116324062,27.9824751251259,3.47008381894061,4.2505474417779,6.36584477697045,12.161190491603,5.26242041364692,4.70159620450084,14.5593104742,17.6645146421721,45.9385571292016,31.8763877157715,26.2874903876785,14.8218267175972,22.6827116783938,11.3082560434205,3.17515336729816,2.46025915033828,15.8481681015439,4.33277429626912,4.82080471539628,4.69589519403449,15.4856703372656,12.5013655123808,6.80580867165938,19.4116391050235,10.9287277593351,18.934903768215,10.1976422560218,11.3542162965856,12.114085642671,2.34717403304412,3.05235218932625,2.85592037554813,4.08302788055995,2.51975558925653,0,9.56360854529097,15.2326049822382,13.779845764841,9.26133969729409,12.0344044774278,12.3761302146586,15.578367486189,12.6957835025288,12.6766280701236,2.37191172448392,3.55717918444456,1.3498495759221,1.97773272513395,2.8419204597844,5.09320187881288,8.4528027170742,17.3161652555158,9.45041568321835,12.4091727197315,21.4238238302853,20.5407743085001,12.4940615199253,11.9806838772795,2.75765635983006,23.1243350098716,36.7739533685341,38.4016333140609,16.7495585417346,19.1209175129036,16.6692278578163,24.5681039121215,27.0126052815206,28.1148775909331,21.8025153250514,33.0302299453919,22.927131836512,15.4481434399695,13.754023939435,15.6526823898906,5.16254326188832,6.79971333707751,3.77792234146472,5.19821133958135,3.13618820968135,5.61777680527007,6.64678258054425,7.01422212427746,4.94675404314476,15.0702459161048,11.5493829672886,15.2883143823987,0,3.030874574157,6.08063677140237,3.53867111510348,12.2176751299394,3.10725460376606,6.08612770165782,8.84775166507293,4.56698217468212,5.99600292865752,8.44046787094686,8.70156432804216,8.16832843642891,9.64060374164058,4.62717942143717,12.3845477272982,11.0001457964238,16.5631138845295,12.6067565815158,3.72783522436244,14.6390398505774,34.5587066242201,14.5610521468897,7.30872259486114,7.19883277192089,5.59108999121485,16.926342252745,15.0975198930147,22.6177833803156,22.0756886644191,34.2658712822643,19.5320761885986,29.2034273521964,11.915205570487,8.8328949133166,3.79084137650512,5.05060454127538,8.58794923553845,10.1156925950728,9.90341713929421,12.2070902446929,13.8794458268709,14.6049641124729,14.8985742049969,8.79591460512653,4.74249584452253,7.37513712654495,5.98233822157426,6.35667624039967,9.17555922444473,9.4028084960985,12.5527103208846,8.55847347319521,6.31991868581911,2.31613116403244,4.54661599032948,10.3562886267751,8.91199027928165,11.704033994966,8.52281048106757,11.8058539048442,12.4956361438776,16.2773761325285,16.0964040839772,28.4907435375894,26.3295759861569,23.8042822914688,16.294830718717,16.5205985790626,15.1489579550825,14.6284996448805,24.1833440848746,24.2854885215111,44.2761169198289,20.0982430664294,7.89166526980366,6.0381534683714,6.57224052742676,5.84882221407693,6.22658522765637,7.03834816616469,18.506633400236,11.5289268306808,8.79673230800943,11.937388322469,11.307917052909,17.9763881730844,13.8328351919804,19.515844778928,4.55202962287396,7.88314737007129,10.1436962105772,7.53509913027663,5.43066964069352,9.88915060453492,8.91635173452028,6.7900668070617,5.96595165797224,6.29325536001183,1.48226313543574,10.5112416601139,15.7247196090562,16.864658428864,19.0688514105193,15.9176925436595,14.0044218479781,12.083237772934,10.7009249671523,7.96228098245436,35.9420516318386,7.81495990103857,4.36852742360385,4.04126204715379,3.22915344339442,7.23665282045051,6.65111484599777,7.20067364727842,5.86673915191293,6.45031325945715,6.57132695207806,5.86271901046355,7.37935286746643,14.4398899414771,9.30047350226527,9.30151696524855,15.3076577911188,10.3233888270915,9.32498902075836,9.69148692496127,0,1.08781136763742,1.96705709207614,2.75936746304733,22.9587343682543,33.1709073055935,9.50822683184717,6.81671503451807,10.0962630213202,7.41833614163613,11.2020166821055,8.84184552424442,10.9171350300373,11.3230612315533,10.9298889452221,12.8592577480977,7.11518000303742,22.4924921495265,6.10342366395555,7.12262414669021,13.1938437076397,5.77395430403874,5.30980553359851,6.06951590387454,6.65111825322452,5.65815239267694,3.83892460745005,4.61152721915891,11.3708448994017,7.27067458955011,5.34746067577082,5.05658812697306,2.10837217149998,3.09406629744561,4.76615448055303,8.46287141947158,5.43306471887569,10.502514716548,7.27094957933322,11.2372355089304,13.3284706687718,9.13394847343798,4.69343416127421,4.87213762986786,4.85162475720916,8.244312647074,10.0107944551461,12.7260271598409,11.5791173683042,14.6085400773105,14.2825609948627,24.2907145633768,11.619219894254,9.49379592630823,12.4080333337707,19.2135826144785,14.4895881384287,21.2763701082066,16.3179292794101,14.2750481370131,12.5761976162026,9.54670618015114,6.48488786841327,7.72613975082025,8.6404272657441,6.690825472463,7.86105229486239,10.6542833644008,9.33984049696296,13.6113089831695,9.72112299688447,3.72803587852155,2.25477175473676,9.71857549285862,6.45288112782681,10.3059129822345,8.26622870257479,7.94093789806657,11.1489376713466,11.7183946359555,10.2762157537197,5.07326653734613,4.32045009386798,3.16011120628178,7.09538253515575,6.88163413004343,6.88580361782314,4.11761400035207,5.16571522431289,6.37035882455835,8.12292399460175,6.15895344683701,6.55378537232999,4.63800451629466,4.77543615624787,5.8689223400601,6.19447581562315,12.0167103316062,4.43971906748129,2.87084341150322,6.37961542183498,7.92077335531981,5.63047426353546,5.86085197655248,7.93163002592544,4.51414893631827,37.2736216127264,53.8580526713397,41.821372481076,26.2935368985842,33.5690434687615,40.0358765616541,41.851395014372,24.3173449741079,26.2822597210839,28.9945774581019,11.5203955818436,11.5717213286299,6.65861062441123,9.48116196566347,11.738337107167,11.2144540154509,7.55638874525492,9.06554251851134,7.38114182061175,6.57012750585873,7.85785829659743,9.61994341068989,9.92599979180754,11.5885525852813,11.5445292600783,9.0495801343784,12.1678542242098,12.9249177710682,13.5988347265091,9.86232764900462,7.20025430009372,9.22874192028555,9.0605752179982,9.59286349773368,11.4813444106703,9.81529451543447,13.3537420197124,9.73357932320019,11.0001332215148,7.2948495315506,12.2194068667899,12.411564779321,15.9600106836179,10.2258315182738,10.0311437710194,10.4920442733937,8.4215379040347,11.1732948105115,7.07766828654721,7.50010825006353,7.88350641109433
|short_description=p2@Pafah1b1
|short_description=p2@Pafah1b1
}}
}}

Latest revision as of 15:53, 25 September 2015

Short description:p2@Pafah1b1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pafah1b1_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: 0bp_to_ENSMUST00000156794_5end
EntrezGene:Pafah1b1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pafah1b1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I556.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I650.96
CD326+ enterocyte, pool1.CNhs13542.11848-124I341.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I457.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.98
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.66
GP2+ M cell, pool1.CNhs13228.11845-124H945.94
GP2+ M cell, pool2.CNhs13231.11846-124I131.88
GP2+ M cell, pool3.CNhs13240.11847-124I226.29
Ileum epithelium, pool1.CNhs13199.10252-104B914.82
Ileum epithelium, pool2.CNhs13232.10253-104C122.68
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G919.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.11
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C315.58
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.40
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.80
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.03
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.93
Mouse Schwann, donor1.CNhs12507.11728-123D915.45
Mouse Schwann, donor2.CNhs12573.11746-123F913.75
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.65
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.22
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D76.09
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F58.44
adrenal gland, neonate N00.CNhs11191.1311-23C18.70
adrenal gland, neonate N25.CNhs11223.1377-27I38.17
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F511.00
bone (os femoris), neonate N16.CNhs11225.1525-43A616.56
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I234.56
colon, adult.CNhs10468.36-18H714.56
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.59
corpora quadrigemina, adult.CNhs10501.16-22A416.93
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F122.62
cortex, adult.CNhs10473.12-14D522.08
cortex, neonate N30.CNhs11107.1392-42F234.27
diencephalon, adult.CNhs10482.20-12F219.53
diencephalon, neonate N30.CNhs11201.1388-42B229.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.83
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C68.59
eyeball, embryo E14.CNhs10521.399-16E210.12
eyeball, embryo E15.CNhs10593.426-16C99.90
eyeball, embryo E17.CNhs11023.1261-18D412.21
eyeball, neonate N00.CNhs11207.633-15C613.88
eyeball, neonate N01.CNhs11140.1532-43E714.60
eyeball, neonate N02.CNhs11205.1551-44G814.90
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H27.38
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B512.55
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F58.91
heart, embryo E13.CNhs11013.376-3I911.70
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C811.81
heart, embryo E16.CNhs11021.457-17C612.50
heart, embryo E17.CNhs11025.479-18E516.28
heart, embryo E18.CNhs11030.1283-20G316.10
heart, neonate N00.CNhs11213.639-21E328.49
heart, neonate N03.CNhs11221.1349-25I226.33
heart, neonate N10.CNhs11118.749-24G123.80
heart, neonate N16.CNhs11209.782-15G116.29
heart, neonate N20.CNhs11127.821-26I616.52
heart, neonate N25.CNhs11196.1351-25D315.15
heart, neonate N30.CNhs11202.1390-42D214.63
hippocampus, adult.CNhs10478.13-16E824.18
hippocampus, neonate N00.CNhs11228.627-43G124.29
intestinal mucosa, adult.CNhs10506.860-29I344.28
intestine, adult.CNhs10496.178-9A320.10
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D86.57
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D118.51
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F211.94
intestine, neonate N10.CNhs11098.755-23A511.31
intestine, neonate N20.CNhs11187.827-18D117.98
intestine, neonate N25.CNhs11121.1352-25E313.83
intestine, neonate N30.CNhs11131.1384-42G119.52
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F87.88
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I27.54
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G79.89
kidney, neonate N10.CNhs11206.758-6D58.92
kidney, neonate N20.CNhs11113.832-19I16.79
kidney, neonate N25.CNhs11122.1353-25F35.97
kidney, neonate N30.CNhs11203.1385-42H16.29
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F810.51
liver, embryo E13.CNhs10524.378-3H615.72
liver, embryo E14.CNhs10594.409-16E116.86
liver, embryo E15.CNhs10520.433-16D719.07
liver, embryo E16.CNhs10523.462-17F515.92
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F410.70
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C614.44
lung, neonate N06.CNhs11212.683-20E59.30
lung, neonate N07.CNhs11111.715-19A39.30
lung, neonate N10.CNhs11219.750-23E615.31
lung, neonate N20.CNhs11109.822-18A410.32
lung, neonate N25.CNhs11119.1359-25C79.32
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C222.96
medulla oblongata, neonate N30.CNhs11200.1396-42A333.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.51
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.86
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I922.49
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H77.12
ovary, neonate N00.CNhs11217.1299-22I413.19
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E68.46
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A510.50
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F611.24
pituitary gland, embryo E17.CNhs11039.1265-44F513.33
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C38.24
skin, neonate N00.CNhs11124.650-25G410.01
skin, neonate N03.CNhs11215.662-22H312.73
skin, neonate N06.CNhs11097.693-20I511.58
skin, neonate N10.CNhs11108.762-6C414.61
small intestine, neonate N16.CNhs11114.790-21I114.28
spinal cord, adult.CNhs10505.24-13C924.29
spleen, adult.CNhs10465.25-2G211.62
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F212.41
spleen, neonate N10.CNhs11116.752-24D119.21
spleen, neonate N20.CNhs11112.824-19H114.49
spleen, neonate N25.CNhs11099.1354-25G321.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.58
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E36.48
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D48.64
stomach, embryo E17.CNhs11006.1035-18D56.69
stomach, embryo E18.CNhs10999.1286-20C67.86
stomach, neonate N03.CNhs11193.1340-24B810.65
stomach, neonate N07.CNhs11210.718-18A99.34
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I19.72
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G510.31
testis, embryo E17.CNhs11029.486-18I58.27
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B711.15
testis, neonate N07.CNhs11222.726-26I411.72
testis, neonate N10.CNhs11204.763-44D910.28
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I47.10
thymus, embryo E15.CNhs11005.430-45I26.88
thymus, embryo E16.CNhs11002.456-26C56.89
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C78.12
thymus, neonate N06.CNhs11197.681-26C46.16
thymus, neonate N07.CNhs11211.713-19D36.55
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A24.78
thymus, neonate N25.CNhs11125.1362-25G75.87
thymus, neonate N30.CNhs11132.1393-42G26.19
tongue, adult.CNhs10499.32-1B412.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.38
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F55.63
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A253.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.82
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.99
whole body, embryo E11.CNhs11014.324-5I811.52
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.35
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.12e-0723
neuroblast (sensu Vertebrata)2.12e-0723

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.77e-1192
regional part of nervous system2.21e-1154
gray matter6.78e-1134
nervous system1.09e-1075
neural tube2.56e-1052
neural rod2.56e-1052
future spinal cord2.56e-1052
neural keel2.56e-1052
central nervous system3.36e-1073
neurectoderm1.22e-0964
neural plate1.22e-0964
presumptive neural plate1.22e-0964
ectoderm-derived structure1.66e-0995
ectoderm1.66e-0995
presumptive ectoderm1.66e-0995
ecto-epithelium3.84e-0973
brain grey matter1.27e-0829
regional part of telencephalon1.27e-0829
telencephalon1.27e-0829
brain3.29e-0847
future brain3.29e-0847
regional part of brain8.02e-0846
anterior neural tube1.13e-0740
tube2.01e-07114
occipital lobe2.05e-0710
visual cortex2.05e-0710
neocortex2.05e-0710
regional part of forebrain2.39e-0739
forebrain2.39e-0739
future forebrain2.39e-0739
pre-chordal neural plate2.40e-0749
anatomical conduit9.59e-07122
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