FFCP PHASE1:Mm9::chr5:130363286..130363299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100045688,14004,433806,665367 | |EntrezGene=100045688,14004,433806,665367 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=118 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D1L0,Q8K3S8 | |UniProt=Q9D1L0,Q8K3S8 | ||
|association_with_transcript=40bp_to_ENSMUST00000094280,NM_024166,uc008ztn.1_5end | |association_with_transcript=40bp_to_ENSMUST00000094280,NM_024166,uc008ztn.1_5end | ||
|cluster_id=chr5:130363286..130363299,- | |||
|description=CAGE_peak_3_at_Chchd2_5end,CAGE_peak_3_at_Gm12350_5end,CAGE_peak_3_at_Gm13202_5end,CAGE_peak_3_at_LOC100045688_5end | |description=CAGE_peak_3_at_Chchd2_5end,CAGE_peak_3_at_Gm12350_5end,CAGE_peak_3_at_Gm13202_5end,CAGE_peak_3_at_LOC100045688_5end | ||
|id=chr5:130363286..130363299,- | |id=chr5:130363286..130363299,- | ||
|ontology_enrichment_celltype=CL:0000988!8.41e-11!32;CL:0002032!8.41e-11!32;CL:0000037!8.41e-11!32;CL:0000566!8.41e-11!32;CL:0000837!8.41e-11!32;CL:0000542!4.31e-09!13;CL:0000051!4.31e-09!13;CL:0000838!1.43e-08!12;CL:0000084!1.95e-08!11;CL:0000827!1.95e-08!11;CL:0000791!1.30e-07!9;CL:0000789!1.30e-07!9;CL:0002420!1.30e-07!9;CL:0002419!1.30e-07!9;CL:0000790!1.30e-07!9;CL:0000624!6.40e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.00e-17,32;CL:0002032,5.00e-17,32;CL:0000037,5.00e-17,32;CL:0000837,5.00e-17,32;CL:0000893,3.48e-14,6;CL:0002489,3.48e-14,6;CL:0000898,3.48e-14,6;CL:0000809,3.48e-14,6;CL:0000810,3.48e-14,6;CL:0000895,3.48e-14,6;CL:0000808,3.48e-14,6;CL:0000894,3.48e-14,6;CL:0000806,3.48e-14,6;CL:0000807,3.48e-14,6;CL:0000805,3.48e-14,6;CL:0002425,3.48e-14,6;CL:0002436,3.48e-14,6;CL:0002427,3.48e-14,6;CL:0002428,3.48e-14,6;CL:0002429,3.48e-14,6;CL:0002433,3.48e-14,6;CL:0002431,3.48e-14,6;CL:0002432,3.48e-14,6;CL:0000084,7.91e-14,11;CL:0000827,7.91e-14,11;CL:0000791,5.15e-13,9;CL:0000789,5.15e-13,9;CL:0002420,5.15e-13,9;CL:0002419,5.15e-13,9;CL:0000790,5.15e-13,9;CL:0002320,1.19e-12,46;CL:0000134,1.19e-12,46;CL:0000838,1.35e-12,12;CL:0000542,1.50e-11,13;CL:0000051,1.50e-11,13;CL:0000624,1.49e-10,8;CL:0000219,2.58e-10,54;CL:0000034,3.33e-09,97;CL:0000738,1.33e-08,17;CL:0002087,1.33e-08,17;CL:0000049,2.31e-07,19;CL:0002031,4.19e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.57e-10!23;UBERON:0000974!1.57e-10!23;UBERON:0004807!1.57e-10!23;UBERON:0005058!1.57e-10!23;UBERON:0003351!1.57e-10!23;UBERON:0009113!1.57e-10!23;UBERON:0003295!1.57e-10!23;UBERON:0009722!1.57e-10!23;UBERON:0005562!1.57e-10!23;UBERON:0007690!1.57e-10!23;UBERON:0002193!4.59e-10!48;UBERON:0006562!1.12e-09!24;UBERON:0003408!1.12e-09!24;UBERON:0001557!1.12e-09!24;UBERON:0001042!1.12e-09!24;UBERON:0008814!1.12e-09!24;UBERON:0009145!1.12e-09!24;UBERON:0002390!4.74e-09!45;UBERON:0003061!4.74e-09!45;UBERON:0004177!5.14e-09!29;UBERON:0000072!1.56e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.16e-17,23;UBERON:0000974,1.16e-17,23;UBERON:0004807,1.16e-17,23;UBERON:0005058,1.16e-17,23;UBERON:0003351,1.16e-17,23;UBERON:0009113,1.16e-17,23;UBERON:0003295,1.16e-17,23;UBERON:0009722,1.16e-17,23;UBERON:0005562,1.16e-17,23;UBERON:0007690,1.16e-17,23;UBERON:0006562,7.97e-17,24;UBERON:0003408,7.97e-17,24;UBERON:0001557,7.97e-17,24;UBERON:0001042,7.97e-17,24;UBERON:0008814,7.97e-17,24;UBERON:0009145,7.97e-17,24;UBERON:0000072,1.08e-14,27;UBERON:0002390,1.11e-14,45;UBERON:0003061,1.11e-14,45;UBERON:0002193,1.48e-13,48;UBERON:0002405,1.48e-13,48;UBERON:0004177,1.63e-13,29;UBERON:0005057,1.63e-13,29;UBERON:0002384,1.19e-12,46;UBERON:0000077,8.60e-11,35;UBERON:0007811,1.99e-10,36;UBERON:0000065,7.19e-09,41;UBERON:0001004,1.33e-08,42;UBERON:0000153,2.38e-08,43;UBERON:0000490,9.43e-08,66;UBERON:0003929,3.84e-07,55 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0.503637815735669,0.233612640595526,0.903863264091034,1.68946466582,5.14941957908386,2.39705155515707,3.82906363177615,0.856003649656029,2.36035086531293,0.333109761815663,0.404950534779652,1.39912375625629,0.630924330716475,0.959801035240171,0,0.17008658030214,0.397163804803541,1.30599894569468,0.47997726838022,0.91763712426868,0.57423196411502,0,0.430942465371778,0.570070258369122,1.26015064879965,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,1.67412652294763,2.3440060335714,0.523523743973798,0,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.335565212115473,0.725362142011344,1.68046899571232,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0.420649922702764,0.285650984403804,0,0.122490799214954,0.670918297127655,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0.0755715601067855,0,0,1.3599426674155,0,0,0,0.702222100658759,0,0,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,2.15667224110656,2.39961092397363,2.28726408731516,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0.260240885925407,0.229902104433473,0.540186389416048,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,0.431135985865684,0.189106080167819,0,0.657587197282725,0.278047249225598,0,0,0,1.40442637462647,2.31613116403244,1.42081749697796,0,0,0,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0.853153002140936,0,0.257734922644187,0,0,0,0,0.329397909448022,0,0,0,0.898819408654221,0.864552199498777,0,0.569003702859245,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0.0603129249281559,0.358117032009409,0.328281799490123,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.457556346413045,1.86976272993241,2.37917468950219,1.65839968565309,0.954670618015114,0.632671987162271,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0.209718688851422,0.241584120826006,0.576060012515731,1.89606672376907,0.202725215290164,0.821687657318618,0.649604114888975,0.895133478337407,0.993406773906324,1.32214994471966,0.886137163047463,1.9183625490148,1.37172251979,1.81487133246313,1.26695244961678,0.962118416403295,1.63627663054197,0,0.443971906748129,0.358855426437903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0.256100609619477,0,0,0,0,0,0,0.342869252385415,0.354951612318675,0,0,0,0.169229215783353,0,0,0,0.561142271657738,0.355905054372522,0,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0.57386499620653,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0.503637815735669,0.233612640595526,0.903863264091034,1.68946466582,5.14941957908386,2.39705155515707,3.82906363177615,0.856003649656029,2.36035086531293,0.333109761815663,0.404950534779652,1.39912375625629,0.630924330716475,0.959801035240171,0,0.17008658030214,0.397163804803541,1.30599894569468,0.47997726838022,0.91763712426868,0.57423196411502,0,0.430942465371778,0.570070258369122,1.26015064879965,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,1.67412652294763,2.3440060335714,0.523523743973798,0,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.335565212115473,0.725362142011344,1.68046899571232,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0.420649922702764,0.285650984403804,0,0.122490799214954,0.670918297127655,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0.0755715601067855,0,0,1.3599426674155,0,0,0,0.702222100658759,0,0,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,2.15667224110656,2.39961092397363,2.28726408731516,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0.260240885925407,0.229902104433473,0.540186389416048,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,0.431135985865684,0.189106080167819,0,0.657587197282725,0.278047249225598,0,0,0,1.40442637462647,2.31613116403244,1.42081749697796,0,0,0,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0.853153002140936,0,0.257734922644187,0,0,0,0,0.329397909448022,0,0,0,0.898819408654221,0.864552199498777,0,0.569003702859245,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0.0603129249281559,0.358117032009409,0.328281799490123,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.457556346413045,1.86976272993241,2.37917468950219,1.65839968565309,0.954670618015114,0.632671987162271,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0.209718688851422,0.241584120826006,0.576060012515731,1.89606672376907,0.202725215290164,0.821687657318618,0.649604114888975,0.895133478337407,0.993406773906324,1.32214994471966,0.886137163047463,1.9183625490148,1.37172251979,1.81487133246313,1.26695244961678,0.962118416403295,1.63627663054197,0,0.443971906748129,0.358855426437903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0.256100609619477,0,0,0,0,0,0,0.342869252385415,0.354951612318675,0,0,0,0.169229215783353,0,0,0,0.561142271657738,0.355905054372522,0,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0.57386499620653,0.220591419119515,0 | ||
|short_description=p3@Chchd2,p3@Gm12350,p3@Gm13202,p3@LOC100045688 | |short_description=p3@Chchd2,p3@Gm12350,p3@Gm13202,p3@LOC100045688 | ||
}} | }} |
Latest revision as of 22:51, 1 October 2015
Short description: | p3@Chchd2, p3@Gm12350, p3@Gm13202, p3@LOC100045688 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Chchd2_5end, CAGE_peak_3_at_Gm12350_5end, CAGE_peak_3_at_Gm13202_5end, CAGE_peak_3_at_LOC100045688_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 40bp_to_ENSMUST00000094280, NM_024166, uc008ztn.1_5end |
EntrezGene: | 100045688,14004,433806,665367 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.16e-17 | 23 |
neck | 1.16e-17 | 23 |
respiratory system epithelium | 1.16e-17 | 23 |
hemolymphoid system gland | 1.16e-17 | 23 |
pharyngeal epithelium | 1.16e-17 | 23 |
thymic region | 1.16e-17 | 23 |
pharyngeal gland | 1.16e-17 | 23 |
entire pharyngeal arch endoderm | 1.16e-17 | 23 |
thymus primordium | 1.16e-17 | 23 |
early pharyngeal endoderm | 1.16e-17 | 23 |
pharynx | 7.97e-17 | 24 |
gland of gut | 7.97e-17 | 24 |
upper respiratory tract | 7.97e-17 | 24 |
chordate pharynx | 7.97e-17 | 24 |
pharyngeal arch system | 7.97e-17 | 24 |
pharyngeal region of foregut | 7.97e-17 | 24 |
segment of respiratory tract | 1.08e-14 | 27 |
hematopoietic system | 1.11e-14 | 45 |
blood island | 1.11e-14 | 45 |
hemolymphoid system | 1.48e-13 | 48 |
immune system | 1.48e-13 | 48 |
hemopoietic organ | 1.63e-13 | 29 |
immune organ | 1.63e-13 | 29 |
connective tissue | 1.19e-12 | 46 |
mixed endoderm/mesoderm-derived structure | 8.60e-11 | 35 |
craniocervical region | 1.99e-10 | 36 |
respiratory tract | 7.19e-09 | 41 |
respiratory system | 1.33e-08 | 42 |
anterior region of body | 2.38e-08 | 43 |
unilaminar epithelium | 9.43e-08 | 66 |
gut epithelium | 3.84e-07 | 55 |