FFCP PHASE1:Mm9::chr12:114664203..114664241,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=123 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114664203..114664241,- | |||
|description=CAGE_peak_at_chr12:114664203..114664241,- | |description=CAGE_peak_at_chr12:114664203..114664241,- | ||
|id=chr12:114664203..114664241,- | |id=chr12:114664203..114664241,- | ||
|ontology_enrichment_celltype=CL:0000988!4.63e-07!32;CL:0002032!4.63e-07!32;CL:0000037!4.63e-07!32;CL:0000566!4.63e-07!32;CL:0000837!4.63e-07!32 | |ontology_enrichment_celltype=CL:0000988!4.63e-07!32;CL:0002032!4.63e-07!32;CL:0000037!4.63e-07!32;CL:0000566!4.63e-07!32;CL:0000837!4.63e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.65e-19,32;CL:0002032,1.65e-19,32;CL:0000037,1.65e-19,32;CL:0000837,1.65e-19,32;CL:0002031,2.08e-12,25;CL:0000838,2.15e-12,12;CL:0002320,5.18e-12,46;CL:0000134,5.18e-12,46;CL:0000542,2.71e-11,13;CL:0000051,2.71e-11,13;CL:0000084,7.21e-11,11;CL:0000827,7.21e-11,11;CL:0000049,1.35e-09,19;CL:0000219,1.67e-09,54;CL:0000738,3.41e-08,17;CL:0002087,3.41e-08,17;CL:0000791,9.94e-08,9;CL:0000789,9.94e-08,9;CL:0002420,9.94e-08,9;CL:0002419,9.94e-08,9;CL:0000790,9.94e-08,9;CL:0000553,1.33e-07,6;CL:0000556,1.33e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.29e-13!48;UBERON:0004177!8.47e-12!29;UBERON:0002390!1.33e-11!45;UBERON:0003061!1.33e-11!45;UBERON:0003408!4.99e-09!24;UBERON:0002370!1.44e-08!23;UBERON:0000974!1.44e-08!23;UBERON:0004807!1.44e-08!23;UBERON:0005058!1.44e-08!23;UBERON:0003351!1.44e-08!23;UBERON:0009113!1.44e-08!23;UBERON:0003295!1.44e-08!23;UBERON:0009722!1.44e-08!23;UBERON:0005562!1.44e-08!23;UBERON:0007690!1.44e-08!23;UBERON:0001004!5.62e-08!42;UBERON:0006562!6.56e-08!24;UBERON:0001557!6.56e-08!24;UBERON:0001042!6.56e-08!24;UBERON:0008814!6.56e-08!24;UBERON:0009145!6.56e-08!24;UBERON:0000065!1.42e-07!41;UBERON:0002405!1.49e-07!70 | |ontology_enrichment_uberon=UBERON:0002193!4.29e-13!48;UBERON:0004177!8.47e-12!29;UBERON:0002390!1.33e-11!45;UBERON:0003061!1.33e-11!45;UBERON:0003408!4.99e-09!24;UBERON:0002370!1.44e-08!23;UBERON:0000974!1.44e-08!23;UBERON:0004807!1.44e-08!23;UBERON:0005058!1.44e-08!23;UBERON:0003351!1.44e-08!23;UBERON:0009113!1.44e-08!23;UBERON:0003295!1.44e-08!23;UBERON:0009722!1.44e-08!23;UBERON:0005562!1.44e-08!23;UBERON:0007690!1.44e-08!23;UBERON:0001004!5.62e-08!42;UBERON:0006562!6.56e-08!24;UBERON:0001557!6.56e-08!24;UBERON:0001042!6.56e-08!24;UBERON:0008814!6.56e-08!24;UBERON:0009145!6.56e-08!24;UBERON:0000065!1.42e-07!41;UBERON:0002405!1.49e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.13e-26,48;UBERON:0002405,1.13e-26,48;UBERON:0002390,2.09e-26,45;UBERON:0003061,2.09e-26,45;UBERON:0004177,1.40e-21,29;UBERON:0005057,1.40e-21,29;UBERON:0002370,8.08e-18,23;UBERON:0000974,8.08e-18,23;UBERON:0004807,8.08e-18,23;UBERON:0005058,8.08e-18,23;UBERON:0003351,8.08e-18,23;UBERON:0009113,8.08e-18,23;UBERON:0003295,8.08e-18,23;UBERON:0009722,8.08e-18,23;UBERON:0005562,8.08e-18,23;UBERON:0007690,8.08e-18,23;UBERON:0000077,5.39e-17,35;UBERON:0006562,6.60e-17,24;UBERON:0003408,6.60e-17,24;UBERON:0001557,6.60e-17,24;UBERON:0001042,6.60e-17,24;UBERON:0008814,6.60e-17,24;UBERON:0009145,6.60e-17,24;UBERON:0000072,1.40e-14,27;UBERON:0003081,2.94e-12,87;UBERON:0002384,5.18e-12,46;UBERON:0000065,1.07e-10,41;UBERON:0001004,2.45e-10,42;UBERON:0007811,5.89e-10,36;UBERON:0000153,1.00e-07,43;UBERON:0000926,1.28e-07,120;UBERON:0004120,1.28e-07,120;UBERON:0006603,1.28e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,4.36445038670167,0,0.171217968225505,0,36.1233540154844,1.83582845079895,2.33176833270964,1.21485160433896,0,6.94016763788123,5.75880621144103,2.97072756258621,0.510259740906419,7.24823943766463,6.79119451761232,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.36234775750115,15.2326049822382,15.1242209614109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,25.8937883647172,0.445326417194474,0.173485326766136,0,0,0,0.117588707135705,0,0,0.289198713839823,2.65383165584962,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,1.02182822083437,4.19352935770721,1.19980546198682,5.46401976414178,0,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0,0,1.11966273549084,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,3.86021860672073,4.26245249093389,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0.146199987425332,0.439100230582101,0.268412837520744,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0.444756087689741,0,0.474529061544512,0,0,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0.482354319504834,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0,0,0,1.47802552133284,0,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0.664394068946325,0.478364305972461,0.983179888294428,1.38147985492716,0.144649058581512,0,0,0.491764273019036,1.65562047782839,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0.820704498725306,0.291480836629851,0.18542530201051,5.12612642393558,0.619160603889667,0.370389054739423,1.31857919903284,3.55404992074665,2.74533807847827,2.37969801991397,3.91864066506242,3.73139929271944,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,16.4325782726653,0.202725215290164,0.102710957164827,6.10627867995637,9.84646826171148,11.5235185773134,8.53387691591779,12.1105412283153,11.1063094942962,9.83067805849498,12.8049255123787,12.9618981383871,14.9128354542511,16.8302739141459,0,0,0,0,0.386379188064381,1.12609485270709,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0.214871054048298,0.191288332068843,0,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,2.45334314538995,4.36445038670167,0,0.171217968225505,0,36.1233540154844,1.83582845079895,2.33176833270964,1.21485160433896,0,6.94016763788123,5.75880621144103,2.97072756258621,0.510259740906419,7.24823943766463,6.79119451761232,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.36234775750115,15.2326049822382,15.1242209614109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,25.8937883647172,0.445326417194474,0.173485326766136,0,0,0,0.117588707135705,0,0,0.289198713839823,2.65383165584962,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,1.02182822083437,4.19352935770721,1.19980546198682,5.46401976414178,0,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0,0,1.11966273549084,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,3.86021860672073,4.26245249093389,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0.146199987425332,0.439100230582101,0.268412837520744,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0.444756087689741,0,0.474529061544512,0,0,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0.482354319504834,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0,0,0,1.47802552133284,0,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0.664394068946325,0.478364305972461,0.983179888294428,1.38147985492716,0.144649058581512,0,0,0.491764273019036,1.65562047782839,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0.820704498725306,0.291480836629851,0.18542530201051,5.12612642393558,0.619160603889667,0.370389054739423,1.31857919903284,3.55404992074665,2.74533807847827,2.37969801991397,3.91864066506242,3.73139929271944,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,16.4325782726653,0.202725215290164,0.102710957164827,6.10627867995637,9.84646826171148,11.5235185773134,8.53387691591779,12.1105412283153,11.1063094942962,9.83067805849498,12.8049255123787,12.9618981383871,14.9128354542511,16.8302739141459,0,0,0,0,0.386379188064381,1.12609485270709,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0.214871054048298,0.191288332068843,0,0.927471342481686 | ||
|short_description=p@chr12:114664203..114664241,- | |short_description=p@chr12:114664203..114664241,- | ||
}} | }} |
Latest revision as of 19:53, 4 August 2015
Short description: | p@chr12:114664203..114664241, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114664203..114664241, - |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.65e-19 | 32 |
hematopoietic oligopotent progenitor cell | 1.65e-19 | 32 |
hematopoietic stem cell | 1.65e-19 | 32 |
hematopoietic multipotent progenitor cell | 1.65e-19 | 32 |
hematopoietic lineage restricted progenitor cell | 2.08e-12 | 25 |
lymphoid lineage restricted progenitor cell | 2.15e-12 | 12 |
connective tissue cell | 5.18e-12 | 46 |
mesenchymal cell | 5.18e-12 | 46 |
lymphocyte | 2.71e-11 | 13 |
common lymphoid progenitor | 2.71e-11 | 13 |
T cell | 7.21e-11 | 11 |
pro-T cell | 7.21e-11 | 11 |
common myeloid progenitor | 1.35e-09 | 19 |
motile cell | 1.67e-09 | 54 |
leukocyte | 3.41e-08 | 17 |
nongranular leukocyte | 3.41e-08 | 17 |
mature alpha-beta T cell | 9.94e-08 | 9 |
alpha-beta T cell | 9.94e-08 | 9 |
immature T cell | 9.94e-08 | 9 |
mature T cell | 9.94e-08 | 9 |
immature alpha-beta T cell | 9.94e-08 | 9 |
megakaryocyte progenitor cell | 1.33e-07 | 6 |
megakaryocyte | 1.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.13e-26 | 48 |
immune system | 1.13e-26 | 48 |
hematopoietic system | 2.09e-26 | 45 |
blood island | 2.09e-26 | 45 |
hemopoietic organ | 1.40e-21 | 29 |
immune organ | 1.40e-21 | 29 |
thymus | 8.08e-18 | 23 |
neck | 8.08e-18 | 23 |
respiratory system epithelium | 8.08e-18 | 23 |
hemolymphoid system gland | 8.08e-18 | 23 |
pharyngeal epithelium | 8.08e-18 | 23 |
thymic region | 8.08e-18 | 23 |
pharyngeal gland | 8.08e-18 | 23 |
entire pharyngeal arch endoderm | 8.08e-18 | 23 |
thymus primordium | 8.08e-18 | 23 |
early pharyngeal endoderm | 8.08e-18 | 23 |
mixed endoderm/mesoderm-derived structure | 5.39e-17 | 35 |
pharynx | 6.60e-17 | 24 |
gland of gut | 6.60e-17 | 24 |
upper respiratory tract | 6.60e-17 | 24 |
chordate pharynx | 6.60e-17 | 24 |
pharyngeal arch system | 6.60e-17 | 24 |
pharyngeal region of foregut | 6.60e-17 | 24 |
segment of respiratory tract | 1.40e-14 | 27 |
lateral plate mesoderm | 2.94e-12 | 87 |
connective tissue | 5.18e-12 | 46 |
respiratory tract | 1.07e-10 | 41 |
respiratory system | 2.45e-10 | 42 |
craniocervical region | 5.89e-10 | 36 |
anterior region of body | 1.00e-07 | 43 |
mesoderm | 1.28e-07 | 120 |
mesoderm-derived structure | 1.28e-07 | 120 |
presumptive mesoderm | 1.28e-07 | 120 |