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FFCP PHASE1:Mm9::chr3:115956385..115956401,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=64378
|EntrezGene=64378
|HGNC=
|HGNC=
|MCL_coexpression_id=90
|TSSclassifier=NA
|UniProt=Q9EPB7,B2RXU4
|UniProt=Q9EPB7,B2RXU4
|association_with_transcript=0bp_to_ENSMUST00000090473,NM_022427,uc008rbz.2_5end
|association_with_transcript=0bp_to_ENSMUST00000090473,NM_022427,uc008rbz.2_5end
|cluster_id=chr3:115956385..115956401,-
|description=CAGE_peak_1_at_Gpr88_5end
|description=CAGE_peak_1_at_Gpr88_5end
|id=chr3:115956385..115956401,-
|id=chr3:115956385..115956401,-
|ontology_enrichment_celltype=CL:0000117!5.45e-10!23;CL:0000337!5.45e-10!23;CL:0000540!9.79e-09!33;CL:0000047!9.79e-09!33;CL:0000031!9.79e-09!33;CL:0000404!9.79e-09!33;CL:0000393!1.41e-08!39;CL:0000211!1.41e-08!39;CL:0000221!5.10e-08!44;CL:0000133!5.10e-08!44;CL:0002319!7.46e-08!43;CL:0000055!1.79e-07!50
|ontology_enrichment_celltype=CL:0000117!5.45e-10!23;CL:0000337!5.45e-10!23;CL:0000540!9.79e-09!33;CL:0000047!9.79e-09!33;CL:0000031!9.79e-09!33;CL:0000404!9.79e-09!33;CL:0000393!1.41e-08!39;CL:0000211!1.41e-08!39;CL:0000221!5.10e-08!44;CL:0000133!5.10e-08!44;CL:0002319!7.46e-08!43;CL:0000055!1.79e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,8.03e-14,23;CL:0000337,8.03e-14,23;CL:0000540,1.02e-11,33;CL:0000047,1.02e-11,33;CL:0000031,1.02e-11,33;CL:0000404,1.02e-11,33;CL:0000393,3.40e-10,39;CL:0000211,3.40e-10,39;CL:0002319,7.55e-10,43;CL:0000221,1.72e-09,44;CL:0000133,1.72e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!3.21e-17!34;UBERON:0001017!1.48e-16!73;UBERON:0005743!1.48e-16!73;UBERON:0001049!1.92e-15!52;UBERON:0005068!1.92e-15!52;UBERON:0006241!1.92e-15!52;UBERON:0007135!1.92e-15!52;UBERON:0000073!2.01e-15!75;UBERON:0001016!2.01e-15!75;UBERON:0000955!5.27e-15!50;UBERON:0006238!5.27e-15!50;UBERON:0002791!1.66e-14!29;UBERON:0003528!1.66e-14!29;UBERON:0001893!1.66e-14!29;UBERON:0002346!1.82e-14!71;UBERON:0003075!1.82e-14!71;UBERON:0007284!1.82e-14!71;UBERON:0002616!1.89e-14!49;UBERON:0003080!3.58e-12!40;UBERON:0000033!4.27e-12!63;UBERON:0002780!1.03e-11!39;UBERON:0001890!1.03e-11!39;UBERON:0006240!1.03e-11!39;UBERON:0004121!1.91e-11!102;UBERON:0000924!1.91e-11!102;UBERON:0006601!1.91e-11!102;UBERON:0000956!2.56e-11!21;UBERON:0001869!2.56e-11!21;UBERON:0000203!2.56e-11!21;UBERON:0002619!3.55e-10!17;UBERON:0003056!1.01e-09!49;UBERON:0002021!1.87e-08!10;UBERON:0000411!1.87e-08!10;UBERON:0001950!1.87e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.89e-26,54;UBERON:0001017,2.78e-24,73;UBERON:0002020,4.44e-24,34;UBERON:0001016,2.61e-23,75;UBERON:0001049,3.58e-22,52;UBERON:0005068,3.58e-22,52;UBERON:0006241,3.58e-22,52;UBERON:0007135,3.58e-22,52;UBERON:0003528,1.31e-20,29;UBERON:0002791,1.31e-20,29;UBERON:0001893,1.31e-20,29;UBERON:0000955,2.44e-20,47;UBERON:0006238,2.44e-20,47;UBERON:0002616,2.35e-19,46;UBERON:0002346,1.75e-18,64;UBERON:0003075,1.75e-18,64;UBERON:0007284,1.75e-18,64;UBERON:0003080,6.98e-18,40;UBERON:0002780,4.81e-17,39;UBERON:0001890,4.81e-17,39;UBERON:0006240,4.81e-17,39;UBERON:0010371,4.28e-16,73;UBERON:0004121,7.20e-16,95;UBERON:0000924,7.20e-16,95;UBERON:0006601,7.20e-16,95;UBERON:0002619,1.42e-15,17;UBERON:0002021,5.92e-15,10;UBERON:0000411,5.92e-15,10;UBERON:0001950,5.92e-15,10;UBERON:0000956,7.25e-14,21;UBERON:0001869,7.25e-14,21;UBERON:0000203,7.25e-14,21;UBERON:0003056,3.50e-13,49;UBERON:0010314,1.09e-10,92;UBERON:0002420,5.31e-08,8;UBERON:0007245,5.31e-08,8;UBERON:0010009,5.31e-08,8;UBERON:0010011,5.31e-08,8;UBERON:0000454,5.31e-08,8
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,5.95303031057488,0,0,0,0,1.14846392823004,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,0.405507724878058,0.550640256485045,17.2126095756569,0.218025156380447,0.439372365468944,1.1665793944457,0,0,0,0,0,0,0,0.515672092277442,1.21389876515759,2.64495489636016,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.945041568321835,0.420649922702764,0.856952953211411,1.98781686856452,17.5161842877384,16.2937300731002,18.3843757322004,7.70811166995721,4.21368215681119,3.22573719838111,1.71452174049252,1.00636407962651,0,1.67509799400829,3.37657566019008,1.98637722109853,2.35702868378934,1.85083185038834,2.05039390407831,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,1.29468941823586,0.742210695324124,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0,0.376999773989026,0.741584903203122,0,1.76922110389975,0.161766849947409,0,0,0,0,0,0,0,0,0,1.3481157546434,357.307970801347,101.654370859307,19.468323861535,28.3844157636667,20.778804455956,81.2828727969466,0,0.622034853050465,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0,0.351902248327898,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0.780534591431195,0,0,0.318909537314974,0.655453258862952,0.518054945597687,0.867894351489069,0,0,0,0,5.9403718295483,4.68846746368813,0.327869890753351,0,0.631016438832513,1.17131623288992,1.29254038639679,0,0,0,0,0.292255857911312,0.395287777946524,1.92792789853084,0.283880170416537,1.6025904330053,0.651547837414304,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0.238744688006273,0,0,0.556275906031529,0.683483523191411,1.03193433981611,0.370389054739423,0.188368457004691,0.136694227721025,0.915112692826091,0,0,0,0.954670618015114,0,0.203319467126849,0.540026704109006,0.418176592028937,0.655087691238533,0.404593039154462,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.629156066554265,0.483168241652012,0,0,0,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,1.50471631210609,22.5900737046827,20.2543104063158,24.0616115644547,14.4356673168698,5.48066015816514,9.06472676867641,12.8254275044043,7.65546045481175,7.25027854374727,5.69536342927002,0,0.399024873401031,0.170733605754134,0.972426868273176,0,0.367687016900028,1.77797382241292,0.824140228955577,1.28367683836726,0.758091635291392,1.01391719956096,0.754505365544305,0.936415074698824,0.640251524048693,1.26358031702349,2.38146845641537,1.27472758539341,1.54327376370964,0.412085900803307,0.294397840268795,1.37147700954166,1.06485483695602,1.66905332963125,1.59881058295561,0.658765662907314,0.676916863133412,1.09756783723664,1.05227884575137,1.62964936615034,0.561142271657738,0.949080144993393,1.28055827088233,0.409231043169689,0.464810523557898,1.35034627686799,2.24829520144151,2.33931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,5.95303031057488,0,0,0,0,1.14846392823004,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,0.405507724878058,0.550640256485045,17.2126095756569,0.218025156380447,0.439372365468944,1.1665793944457,0,0,0,0,0,0,0,0.515672092277442,1.21389876515759,2.64495489636016,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.945041568321835,0.420649922702764,0.856952953211411,1.98781686856452,17.5161842877384,16.2937300731002,18.3843757322004,7.70811166995721,4.21368215681119,3.22573719838111,1.71452174049252,1.00636407962651,0,1.67509799400829,3.37657566019008,1.98637722109853,2.35702868378934,1.85083185038834,2.05039390407831,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,1.29468941823586,0.742210695324124,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0,0.376999773989026,0.741584903203122,0,1.76922110389975,0.161766849947409,0,0,0,0,0,0,0,0,0,1.3481157546434,357.307970801347,101.654370859307,19.468323861535,28.3844157636667,20.778804455956,81.2828727969466,0,0.622034853050465,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0,0.351902248327898,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0.780534591431195,0,0,0.318909537314974,0.655453258862952,0.518054945597687,0.867894351489069,0,0,0,0,5.9403718295483,4.68846746368813,0.327869890753351,0,0.631016438832513,1.17131623288992,1.29254038639679,0,0,0,0,0.292255857911312,0.395287777946524,1.92792789853084,0.283880170416537,1.6025904330053,0.651547837414304,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0.238744688006273,0,0,0.556275906031529,0.683483523191411,1.03193433981611,0.370389054739423,0.188368457004691,0.136694227721025,0.915112692826091,0,0,0,0.954670618015114,0,0.203319467126849,0.540026704109006,0.418176592028937,0.655087691238533,0.404593039154462,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.629156066554265,0.483168241652012,0,0,0,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,1.50471631210609,22.5900737046827,20.2543104063158,24.0616115644547,14.4356673168698,5.48066015816514,9.06472676867641,12.8254275044043,7.65546045481175,7.25027854374727,5.69536342927002,0,0.399024873401031,0.170733605754134,0.972426868273176,0,0.367687016900028,1.77797382241292,0.824140228955577,1.28367683836726,0.758091635291392,1.01391719956096,0.754505365544305,0.936415074698824,0.640251524048693,1.26358031702349,2.38146845641537,1.27472758539341,1.54327376370964,0.412085900803307,0.294397840268795,1.37147700954166,1.06485483695602,1.66905332963125,1.59881058295561,0.658765662907314,0.676916863133412,1.09756783723664,1.05227884575137,1.62964936615034,0.561142271657738,0.949080144993393,1.28055827088233,0.409231043169689,0.464810523557898,1.35034627686799,2.24829520144151,2.33931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0
|short_description=p1@Gpr88
|short_description=p1@Gpr88
}}
}}

Latest revision as of 11:51, 1 October 2015

Short description:p1@Gpr88
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gpr88_5end
Coexpression cluster:MCL_coexpression_mm9:90
Association with transcript: 0bp_to_ENSMUST00000090473, NM_022427, uc008rbz.2_5end
EntrezGene:Gpr88
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gpr88

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.52
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D8357.31
corpus striatum, neonate N00.CNhs11226.630-43F1101.65
cortex, adult.CNhs10473.12-14D519.47
cortex, neonate N30.CNhs11107.1392-42F228.38
diencephalon, adult.CNhs10482.20-12F220.78
diencephalon, neonate N30.CNhs11201.1388-42B281.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.25
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.03e-1423
neuroblast (sensu Vertebrata)8.03e-1423
neuron1.02e-1133
neuronal stem cell1.02e-1133
neuroblast1.02e-1133
electrically signaling cell1.02e-1133
electrically responsive cell3.40e-1039
electrically active cell3.40e-1039
neural cell7.55e-1043
ectodermal cell1.72e-0944
neurectodermal cell1.72e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.89e-2654
central nervous system2.78e-2473
gray matter4.44e-2434
nervous system2.61e-2375
neural tube3.58e-2252
neural rod3.58e-2252
future spinal cord3.58e-2252
neural keel3.58e-2252
brain grey matter1.31e-2029
regional part of telencephalon1.31e-2029
telencephalon1.31e-2029
brain2.44e-2047
future brain2.44e-2047
regional part of brain2.35e-1946
neurectoderm1.75e-1864
neural plate1.75e-1864
presumptive neural plate1.75e-1864
anterior neural tube6.98e-1840
regional part of forebrain4.81e-1739
forebrain4.81e-1739
future forebrain4.81e-1739
ecto-epithelium4.28e-1673
ectoderm-derived structure7.20e-1695
ectoderm7.20e-1695
presumptive ectoderm7.20e-1695
regional part of cerebral cortex1.42e-1517
occipital lobe5.92e-1510
visual cortex5.92e-1510
neocortex5.92e-1510
cerebral cortex7.25e-1421
cerebral hemisphere7.25e-1421
pallium7.25e-1421
pre-chordal neural plate3.50e-1349
structure with developmental contribution from neural crest1.09e-1092
basal ganglion5.31e-088
nuclear complex of neuraxis5.31e-088
aggregate regional part of brain5.31e-088
collection of basal ganglia5.31e-088
cerebral subcortex5.31e-088
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