FFCP PHASE1:Mm9::chr14:70920463..70920489,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12153 | |EntrezGene=12153 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NZM2,Q570Z4 | |UniProt=Q6NZM2,Q570Z4 | ||
|association_with_transcript=-396bp_to_ENSMUST00000022693,ENSMUST00000111001,NM_009755,NR_033241,uc007uoc.2,uc007uod.2_5end | |association_with_transcript=-396bp_to_ENSMUST00000022693,ENSMUST00000111001,NM_009755,NR_033241,uc007uoc.2,uc007uod.2_5end | ||
|cluster_id=chr14:70920463..70920489,- | |||
|description=CAGE_peak_5_at_Bmp1_5end | |description=CAGE_peak_5_at_Bmp1_5end | ||
|id=chr14:70920463..70920489,- | |id=chr14:70920463..70920489,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.92e-12!52;UBERON:0005068!4.92e-12!52;UBERON:0006241!4.92e-12!52;UBERON:0007135!4.92e-12!52;UBERON:0000073!6.40e-12!75;UBERON:0001016!6.40e-12!75;UBERON:0001017!2.25e-11!73;UBERON:0005743!2.25e-11!73;UBERON:0000955!4.78e-11!50;UBERON:0006238!4.78e-11!50;UBERON:0002616!1.41e-10!49;UBERON:0002020!1.69e-10!34;UBERON:0004121!4.27e-10!102;UBERON:0000924!4.27e-10!102;UBERON:0006601!4.27e-10!102;UBERON:0002791!7.87e-10!29;UBERON:0003528!7.87e-10!29;UBERON:0001893!7.87e-10!29;UBERON:0002346!2.08e-09!71;UBERON:0003075!2.08e-09!71;UBERON:0007284!2.08e-09!71;UBERON:0003080!1.04e-08!40;UBERON:0000033!1.29e-08!63;UBERON:0002780!2.31e-08!39;UBERON:0001890!2.31e-08!39;UBERON:0006240!2.31e-08!39;UBERON:0002619!3.23e-07!17;UBERON:0000956!4.06e-07!21;UBERON:0001869!4.06e-07!21;UBERON:0000203!4.06e-07!21;UBERON:0003056!4.49e-07!49 | |ontology_enrichment_uberon=UBERON:0001049!4.92e-12!52;UBERON:0005068!4.92e-12!52;UBERON:0006241!4.92e-12!52;UBERON:0007135!4.92e-12!52;UBERON:0000073!6.40e-12!75;UBERON:0001016!6.40e-12!75;UBERON:0001017!2.25e-11!73;UBERON:0005743!2.25e-11!73;UBERON:0000955!4.78e-11!50;UBERON:0006238!4.78e-11!50;UBERON:0002616!1.41e-10!49;UBERON:0002020!1.69e-10!34;UBERON:0004121!4.27e-10!102;UBERON:0000924!4.27e-10!102;UBERON:0006601!4.27e-10!102;UBERON:0002791!7.87e-10!29;UBERON:0003528!7.87e-10!29;UBERON:0001893!7.87e-10!29;UBERON:0002346!2.08e-09!71;UBERON:0003075!2.08e-09!71;UBERON:0007284!2.08e-09!71;UBERON:0003080!1.04e-08!40;UBERON:0000033!1.29e-08!63;UBERON:0002780!2.31e-08!39;UBERON:0001890!2.31e-08!39;UBERON:0006240!2.31e-08!39;UBERON:0002619!3.23e-07!17;UBERON:0000956!4.06e-07!21;UBERON:0001869!4.06e-07!21;UBERON:0000203!4.06e-07!21;UBERON:0003056!4.49e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.39e-14,52;UBERON:0005068,7.39e-14,52;UBERON:0006241,7.39e-14,52;UBERON:0007135,7.39e-14,52;UBERON:0002020,1.20e-13,34;UBERON:0001016,2.78e-13,75;UBERON:0000073,4.74e-13,54;UBERON:0000955,5.08e-13,47;UBERON:0006238,5.08e-13,47;UBERON:0001017,5.50e-13,73;UBERON:0003528,9.34e-13,29;UBERON:0002791,9.34e-13,29;UBERON:0001893,9.34e-13,29;UBERON:0002616,2.93e-12,46;UBERON:0002346,2.10e-10,64;UBERON:0003075,2.10e-10,64;UBERON:0007284,2.10e-10,64;UBERON:0011216,2.56e-10,194;UBERON:0002619,7.03e-10,17;UBERON:0003080,1.11e-09,40;UBERON:0004121,1.41e-09,95;UBERON:0000924,1.41e-09,95;UBERON:0006601,1.41e-09,95;UBERON:0010371,1.61e-09,73;UBERON:0002780,3.98e-09,39;UBERON:0001890,3.98e-09,39;UBERON:0006240,3.98e-09,39;UBERON:0002021,8.13e-09,10;UBERON:0000411,8.13e-09,10;UBERON:0001950,8.13e-09,10;UBERON:0000956,8.23e-09,21;UBERON:0001869,8.23e-09,21;UBERON:0000203,8.23e-09,21;UBERON:0003056,9.39e-07,49 | |||
|phase1_expression=0.640595388419176,6.97950815278722,5.0049916332849,3.62957053568196,3.00537437967808,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,1.75991665072747,2.2940928106717,1.72269589234506,1.29228598847722,0.861884930743556,1.33016393619462,1.26015064879965,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,1.28482726513177,0.782391344348039,0.436050312760893,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0.771778308107841,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0.7104801149461,0.599200221036809,1.92109152660777,0.414758449233911,0.540023753326763,0.420649922702764,1.71390590642282,1.10434270475807,0.857435594504678,1.62937300731002,2.75765635983006,0,1.14918604276669,0.614426133024974,1.05509030184155,1.37231465403614,1.04182674111352,1.95428099300967,1.12552522006336,0.763991238884051,0.294628585473668,0.427115042397309,1.4911955666024,0.757261933331841,1.36028808192214,0,0,0.679971333707751,0.539703191637817,0,1.79210754838934,0.421333260395256,0.852151612890289,0.519572009205738,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0,0,0.5709193985953,0,0.593768556259299,0.346970653532272,0,0.922461989024234,0.60289056221049,0.823120949949934,0.125666591329675,0.988779870937496,0.144599356919912,0,1.13236794963186,0.662524555381181,0.969750506270444,0,16.3957246326466,22.4107976290397,0.766371165625774,0,0,0,1.19832511523858,1.83000241127451,1.13088916901578,2.9550134432687,4.60287823194595,0.62336413367868,3.0825839982874,0.509196819251581,0.746441823660558,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.95251098811859,0.512454881139399,0.374806898238915,0.258703370739016,0.431135985865684,1.13463648100692,0.703804496655795,0.43839146485515,0.278047249225598,0,1.02891068203972,0.59710280045548,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.771335564436891,0.465067889500816,0.268273401399619,0.233530684734339,0.658239399653922,0.32833492815819,0.405344047729279,0.438599962275997,0,0.268412837520744,2.52347938276953,1.3377599609307,1.98251269790279,1.58670339998127,0,0.928946687441754,0.128867461322093,0.403367049246685,0.22237804384487,1.14135375667535,3.32170343081158,0.823494773620054,1.50801125280162,0.795825888164603,1.16978452271472,1.79763881730844,2.37751854862164,2.19055400579804,0,0.114248512609729,0,0.407302655690628,0,0.210407459670956,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.810676133875177,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,1.51547326768267,1.97337154874103,2.41221760681684,0.184753190166605,0.189491411770485,1.14075483509418,0.509235257325564,1.17345124144251,0.837531287209079,0.238043640886014,0.195133647857799,0.788175720530955,1.32878813789265,0.637819074629948,0.163863314715738,0,0,0,0,0,0,1.60550589987792,2.69586879162067,0,0.504941854408746,0.315508219416257,0,1.29254038639679,0.238968797952552,1.11399337041197,1.41538265394416,0,0.584511715822624,0,1.60660658210904,0.425820255624806,1.24645922567079,0.488660878060728,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.388076051348264,0.857348140126369,0.532020700926821,0.178368817602071,0.329098041204242,0.913394847343798,0.938686832254841,0.847328283455281,0,0.49465875882444,0.645857706783622,0.904693873922338,1.19372344003136,1.47726809770555,1.1659233465194,1.11255181206306,0.170870880797853,0.619160603889667,0.555583582109135,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0.432021363287205,0.418176592028937,0,0.539457385539283,0.661227645802687,0.523511883968059,1.29614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0,0,0.453460767230423,0.221985953374065,0.538283139656854,0.839423081820392,0,0.750729901804728,0.36630324853453,0.643105137237198,0,1.12950368523413,1.38097570952153,0.572895513439397,1.71853182343688,2.74033007908257,1.5107877947794,2.02506750069542,2.2516060161211,1.81256963593682,2.07104124700728,0.103787347584177,0.798049746802062,1.53660245178721,0.243106717068294,0.209613162627982,0.551530525350042,1.55572709461131,0.618105171716683,0.320919209591815,0.758091635291392,0,0.943131706930381,0.0936415074698824,0.512201219238954,0.631790158511746,0.476293691283074,0.927074607558844,0.77163688185482,1.23625770240992,0.588795680537589,0,0.887379030796687,1.1921809497366,1.16277133305863,0.752875043322645,0.846146078916765,0.73171189149109,0.526139422875686,0.679020569229309,0,0.830445126869219,0.985044823755635,0.818462086339379,0.619747364743864,0.578719832943424,0.749431733813838,0.701794825336225,0.429742108096597,0.765153328275374,1.10295709559758,0.927471342481686 | |phase1_expression=0.640595388419176,6.97950815278722,5.0049916332849,3.62957053568196,3.00537437967808,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,1.75991665072747,2.2940928106717,1.72269589234506,1.29228598847722,0.861884930743556,1.33016393619462,1.26015064879965,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,1.28482726513177,0.782391344348039,0.436050312760893,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0.771778308107841,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0.7104801149461,0.599200221036809,1.92109152660777,0.414758449233911,0.540023753326763,0.420649922702764,1.71390590642282,1.10434270475807,0.857435594504678,1.62937300731002,2.75765635983006,0,1.14918604276669,0.614426133024974,1.05509030184155,1.37231465403614,1.04182674111352,1.95428099300967,1.12552522006336,0.763991238884051,0.294628585473668,0.427115042397309,1.4911955666024,0.757261933331841,1.36028808192214,0,0,0.679971333707751,0.539703191637817,0,1.79210754838934,0.421333260395256,0.852151612890289,0.519572009205738,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0,0,0.5709193985953,0,0.593768556259299,0.346970653532272,0,0.922461989024234,0.60289056221049,0.823120949949934,0.125666591329675,0.988779870937496,0.144599356919912,0,1.13236794963186,0.662524555381181,0.969750506270444,0,16.3957246326466,22.4107976290397,0.766371165625774,0,0,0,1.19832511523858,1.83000241127451,1.13088916901578,2.9550134432687,4.60287823194595,0.62336413367868,3.0825839982874,0.509196819251581,0.746441823660558,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.95251098811859,0.512454881139399,0.374806898238915,0.258703370739016,0.431135985865684,1.13463648100692,0.703804496655795,0.43839146485515,0.278047249225598,0,1.02891068203972,0.59710280045548,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.771335564436891,0.465067889500816,0.268273401399619,0.233530684734339,0.658239399653922,0.32833492815819,0.405344047729279,0.438599962275997,0,0.268412837520744,2.52347938276953,1.3377599609307,1.98251269790279,1.58670339998127,0,0.928946687441754,0.128867461322093,0.403367049246685,0.22237804384487,1.14135375667535,3.32170343081158,0.823494773620054,1.50801125280162,0.795825888164603,1.16978452271472,1.79763881730844,2.37751854862164,2.19055400579804,0,0.114248512609729,0,0.407302655690628,0,0.210407459670956,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.810676133875177,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,1.51547326768267,1.97337154874103,2.41221760681684,0.184753190166605,0.189491411770485,1.14075483509418,0.509235257325564,1.17345124144251,0.837531287209079,0.238043640886014,0.195133647857799,0.788175720530955,1.32878813789265,0.637819074629948,0.163863314715738,0,0,0,0,0,0,1.60550589987792,2.69586879162067,0,0.504941854408746,0.315508219416257,0,1.29254038639679,0.238968797952552,1.11399337041197,1.41538265394416,0,0.584511715822624,0,1.60660658210904,0.425820255624806,1.24645922567079,0.488660878060728,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.388076051348264,0.857348140126369,0.532020700926821,0.178368817602071,0.329098041204242,0.913394847343798,0.938686832254841,0.847328283455281,0,0.49465875882444,0.645857706783622,0.904693873922338,1.19372344003136,1.47726809770555,1.1659233465194,1.11255181206306,0.170870880797853,0.619160603889667,0.555583582109135,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0.432021363287205,0.418176592028937,0,0.539457385539283,0.661227645802687,0.523511883968059,1.29614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0,0,0.453460767230423,0.221985953374065,0.538283139656854,0.839423081820392,0,0.750729901804728,0.36630324853453,0.643105137237198,0,1.12950368523413,1.38097570952153,0.572895513439397,1.71853182343688,2.74033007908257,1.5107877947794,2.02506750069542,2.2516060161211,1.81256963593682,2.07104124700728,0.103787347584177,0.798049746802062,1.53660245178721,0.243106717068294,0.209613162627982,0.551530525350042,1.55572709461131,0.618105171716683,0.320919209591815,0.758091635291392,0,0.943131706930381,0.0936415074698824,0.512201219238954,0.631790158511746,0.476293691283074,0.927074607558844,0.77163688185482,1.23625770240992,0.588795680537589,0,0.887379030796687,1.1921809497366,1.16277133305863,0.752875043322645,0.846146078916765,0.73171189149109,0.526139422875686,0.679020569229309,0,0.830445126869219,0.985044823755635,0.818462086339379,0.619747364743864,0.578719832943424,0.749431733813838,0.701794825336225,0.429742108096597,0.765153328275374,1.10295709559758,0.927471342481686 | ||
|short_description=p5@Bmp1 | |short_description=p5@Bmp1 | ||
}} | }} |
Latest revision as of 08:33, 26 September 2015
Short description: | p5@Bmp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bmp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -396bp_to_ENSMUST00000022693, ENSMUST00000111001, NM_009755, NR_033241, uc007uoc.2, uc007uod.2_5end |
EntrezGene: | Bmp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.39e-14 | 52 |
neural rod | 7.39e-14 | 52 |
future spinal cord | 7.39e-14 | 52 |
neural keel | 7.39e-14 | 52 |
gray matter | 1.20e-13 | 34 |
nervous system | 2.78e-13 | 75 |
regional part of nervous system | 4.74e-13 | 54 |
brain | 5.08e-13 | 47 |
future brain | 5.08e-13 | 47 |
central nervous system | 5.50e-13 | 73 |
brain grey matter | 9.34e-13 | 29 |
regional part of telencephalon | 9.34e-13 | 29 |
telencephalon | 9.34e-13 | 29 |
regional part of brain | 2.93e-12 | 46 |
neurectoderm | 2.10e-10 | 64 |
neural plate | 2.10e-10 | 64 |
presumptive neural plate | 2.10e-10 | 64 |
organ system subdivision | 2.56e-10 | 194 |
regional part of cerebral cortex | 7.03e-10 | 17 |
anterior neural tube | 1.11e-09 | 40 |
ectoderm-derived structure | 1.41e-09 | 95 |
ectoderm | 1.41e-09 | 95 |
presumptive ectoderm | 1.41e-09 | 95 |
ecto-epithelium | 1.61e-09 | 73 |
regional part of forebrain | 3.98e-09 | 39 |
forebrain | 3.98e-09 | 39 |
future forebrain | 3.98e-09 | 39 |
occipital lobe | 8.13e-09 | 10 |
visual cortex | 8.13e-09 | 10 |
neocortex | 8.13e-09 | 10 |
cerebral cortex | 8.23e-09 | 21 |
cerebral hemisphere | 8.23e-09 | 21 |
pallium | 8.23e-09 | 21 |
pre-chordal neural plate | 9.39e-07 | 49 |