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FFCP PHASE1:Mm9::chr9:107569706..107569721,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76257
|EntrezGene=76257
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=Q9DCP2
|UniProt=Q9DCP2
|association_with_transcript=-1bp_to_ENSMUST00000010208_5end
|association_with_transcript=-1bp_to_ENSMUST00000010208_5end
|cluster_id=chr9:107569706..107569721,-
|description=CAGE_peak_1_at_Slc38a3_5end
|description=CAGE_peak_1_at_Slc38a3_5end
|id=chr9:107569706..107569721,-
|id=chr9:107569706..107569721,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.65e-12!63;UBERON:0002346!1.27e-11!71;UBERON:0003075!1.27e-11!71;UBERON:0007284!1.27e-11!71;UBERON:0004121!1.78e-11!102;UBERON:0000924!1.78e-11!102;UBERON:0006601!1.78e-11!102;UBERON:0001049!5.93e-11!52;UBERON:0005068!5.93e-11!52;UBERON:0006241!5.93e-11!52;UBERON:0007135!5.93e-11!52;UBERON:0002107!1.26e-10!22;UBERON:0007499!1.26e-10!22;UBERON:0006925!1.26e-10!22;UBERON:0009497!1.26e-10!22;UBERON:0000015!1.26e-10!22;UBERON:0002423!1.26e-10!22;UBERON:0006235!1.26e-10!22;UBERON:0008835!1.26e-10!22;UBERON:0003894!1.26e-10!22;UBERON:0004161!1.26e-10!22;UBERON:0008836!1.26e-10!22;UBERON:0000955!3.12e-10!50;UBERON:0006238!3.12e-10!50;UBERON:0009854!3.51e-10!23;UBERON:0009856!3.51e-10!23;UBERON:0003056!6.23e-10!49;UBERON:0001017!6.28e-10!73;UBERON:0005743!6.28e-10!73;UBERON:0000025!8.16e-10!114;UBERON:0002616!9.27e-10!49;UBERON:0002365!1.11e-09!25;UBERON:0002330!1.11e-09!25;UBERON:0000468!3.63e-09!333;UBERON:0000073!4.37e-09!75;UBERON:0001016!4.37e-09!75;UBERON:0004111!2.07e-08!122;UBERON:0000475!2.40e-08!200;UBERON:0002020!5.50e-08!34;UBERON:0001264!2.12e-07!12;UBERON:0003922!2.12e-07!12;UBERON:0002114!2.12e-07!12;UBERON:0003923!2.12e-07!12;UBERON:0003924!2.12e-07!12;UBERON:0003921!2.12e-07!12;UBERON:0003080!3.70e-07!40;UBERON:0001045!6.89e-07!13;UBERON:0002780!9.02e-07!39;UBERON:0001890!9.02e-07!39;UBERON:0006240!9.02e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.52e-12,64;UBERON:0003075,2.52e-12,64;UBERON:0007284,2.52e-12,64;UBERON:0010371,3.29e-12,73;UBERON:0000073,1.40e-11,54;UBERON:0004121,1.40e-11,95;UBERON:0000924,1.40e-11,95;UBERON:0006601,1.40e-11,95;UBERON:0001049,4.35e-11,52;UBERON:0005068,4.35e-11,52;UBERON:0006241,4.35e-11,52;UBERON:0007135,4.35e-11,52;UBERON:0002107,9.39e-11,22;UBERON:0007499,9.39e-11,22;UBERON:0006925,9.39e-11,22;UBERON:0009497,9.39e-11,22;UBERON:0000015,9.39e-11,22;UBERON:0002423,9.39e-11,22;UBERON:0006235,9.39e-11,22;UBERON:0008835,9.39e-11,22;UBERON:0003894,9.39e-11,22;UBERON:0004161,9.39e-11,22;UBERON:0008836,9.39e-11,22;UBERON:0009854,2.64e-10,23;UBERON:0009856,2.64e-10,23;UBERON:0003056,4.73e-10,49;UBERON:0002365,7.06e-10,25;UBERON:0002330,7.06e-10,25;UBERON:0001017,1.20e-09,73;UBERON:0000025,1.23e-09,114;UBERON:0000955,1.94e-09,47;UBERON:0006238,1.94e-09,47;UBERON:0010314,2.48e-09,92;UBERON:0002616,5.71e-09,46;UBERON:0001016,1.19e-08,75;UBERON:0004111,3.31e-08,122;UBERON:0002020,4.45e-08,34;UBERON:0001264,1.75e-07,12;UBERON:0003080,3.08e-07,40;UBERON:0002780,7.59e-07,39;UBERON:0001890,7.59e-07,39;UBERON:0006240,7.59e-07,39
|phase1_expression=18.4171174170513,0,0,0,0,0,0,0,0.563154888606667,1.87251621057595,0,0,0,0.0874204024189974,0,0,0,0,0,0,30.445497874083,0.198581902401771,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2126095756569,73.4744777002105,87.2154145455853,44.1355870898623,23.7976916763116,31.6255641602937,0,0,0,0,0,0,16.9945827122062,19.0436752537932,17.1134478946668,2.37191172448392,6.22506357277798,0,1.97773272513395,0,234.886486646429,564.416690517364,18.0419925416751,20.1158848114219,20.4015212510841,102.548703400965,99.6117119691777,15.6788222995141,14.9518934788449,15.6267193723704,39.6417171597799,74.1863434274941,52.8406474401478,19.9148294472593,20.6762074541446,14.0646610050325,81.5214357084032,73.1591393041184,59.4385183851791,68.6484604153646,68.7655218259667,27.5871179821445,0.075726193333184,0.377857800533928,5.79728977403356,738.243686450029,1620.37168822557,1798.83073772884,1781.03716022406,2426.51362051917,695.340324072303,0,0,0,4.3661460130771,0,0,0,0,0.506719730950197,0,677.909693892059,0.258937883647172,12.4691396814453,3.12273588179045,7.91610243611567,17.9880087859726,10.7013074792362,14.1106448562846,9.55066094105534,38.5624149665623,3.18118585223806,13.2691582792481,16.985519244478,37.9847411751877,20.8496358848145,7.45567044872489,70.2673912827713,59.4828647350212,19.9256503062701,0,0,0,99.9103564830167,55.3575729410538,25.6334878310243,77.1779981653708,62.650287045931,87.4787667595748,63.1118513333577,2.03678727700633,19.2830804445644,3.28539585963777,123.52936940536,45.672275479909,25.0593293832485,28.9900028986612,44.4579212615359,78.7182295180863,92.8824472065161,83.7693417563976,264.912251636752,2.80238390812695,3.78212160335639,3.87092473160687,5.04150184583422,3.05851974148158,9.05455632957633,8.43706759272568,3.58261680273288,0,0,0,3.10688658803253,5.15957331958412,2.34080679899319,3.55117103377815,2.75469924446365,2.62254091908543,2.79040733700489,2.14618721119695,5.25444040652263,6.08871444679878,26.4309617167343,62.2608457312172,74.1233936246435,75.9643398907035,113.807043108795,84.1159794256509,49.8058323915737,15.5296828002385,0.264450566663544,3.62590025909898,2.55460339046482,6.95884291139304,12.3026950020239,6.0042071838115,10.2721838100782,8.0669940462567,3.12928013975621,14.3261069016154,13.5290400987983,17.1568396664826,9.88701349519644,0,4.77939055810481,3.41402221715547,6.62641373136427,5.63538678365402,11.4044743593376,22.4984885114446,34.576959205927,16.947391949301,76.3144465054543,105.660143837245,79.4677735656395,2766.79236860436,3.00321190288969,8.64859578498093,22.0364870137157,67.75528054376,163.035759992634,322.610954207059,337.17987309235,441.818492961971,490.366683953914,451.432168495893,858.901307218906,825.651683061127,1255.0644445192,1528.46596320669,1891.1786037444,0.739012760666419,2.27389694124582,3.58522948172457,2.37643120085263,2.34690248288502,3.68513766371995,13.0924002487308,1.36593553500459,0.945810864637146,1.99318220683897,0.956728611944923,1.14704320301017,1.38147985492716,0.144649058581512,0,0,39.3411418415229,26.4899276452543,111.743210631503,70.9130703882829,0,131.284882146274,1.57754109708128,0.390438744296638,0.646270193198397,1.19484398976276,1.33679204449436,2.83076530788832,1.61924280669958,0.584511715822624,1.18586333383957,167.729727172183,25.5492153374884,12.1084610493734,2.28041743095006,0.164970122972535,343.809908300504,53.6545205902509,111.859716076958,147.677777448868,136.134172618036,145.109389829534,63.5733601193824,170.49731912495,203.203505679291,237.343605209798,373.181874355496,324.876961231789,4.76615448055303,16.9257428389432,20.568030721458,21.4337035031592,17.9113635978696,20.155676389034,17.2776471632227,16.4411072521884,10.0908834467395,3.60114520468494,1.32317038832977,17.1481703059139,2.42196640043858,7.84068024066026,21.9645112965771,33.3206026482474,6.70405924248657,106.248698052022,0,15.4790150972417,3.70389054739423,0.565105371014073,0.820165366326151,0.457556346413045,0,0,0,33.413471630529,3.16335993581135,20.3319467126849,7.56037385752609,2.09088296014469,8.29777742235475,18.4764154547204,83.893257561216,12.3025292732494,0.129614973291793,0,0,3.88743019714345,3.47462829959905,3.11121901350476,5.42471258606471,10.3063236549375,8.56707842114004,15.8849349509619,0.629156066554265,0,12.0972602628303,0.632022241256357,5.6763060281246,6.16265742988964,4.28738715826724,1.9692936523423,0.79472541912506,0,0.738447635872886,0.100966449948148,0.381034033274999,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,53.7351009168051,5.32766288097755,25.3890214204816,34.4163463546361,0.772758376128762,0,0.549454872801795,1.71494703263253,0,52.5219213633872,44.191222704689,54.9979692901821,34.7143428334249,47.2706938641743,55.1437545094481,41.851395014372,45.9327627288705,39.4233895816258,71.4509230217512,1.45302286617847,10.7736715818278,7.85374586469017,20.664070950805,9.4325923182592,27.2088392506021,37.1152035428697,36.4682051312843,36.9057091030588,33.3560319528213,33.459267585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|phase1_expression=18.4171174170513,0,0,0,0,0,0,0,0.563154888606667,1.87251621057595,0,0,0,0.0874204024189974,0,0,0,0,0,0,30.445497874083,0.198581902401771,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2126095756569,73.4744777002105,87.2154145455853,44.1355870898623,23.7976916763116,31.6255641602937,0,0,0,0,0,0,16.9945827122062,19.0436752537932,17.1134478946668,2.37191172448392,6.22506357277798,0,1.97773272513395,0,234.886486646429,564.416690517364,18.0419925416751,20.1158848114219,20.4015212510841,102.548703400965,99.6117119691777,15.6788222995141,14.9518934788449,15.6267193723704,39.6417171597799,74.1863434274941,52.8406474401478,19.9148294472593,20.6762074541446,14.0646610050325,81.5214357084032,73.1591393041184,59.4385183851791,68.6484604153646,68.7655218259667,27.5871179821445,0.075726193333184,0.377857800533928,5.79728977403356,738.243686450029,1620.37168822557,1798.83073772884,1781.03716022406,2426.51362051917,695.340324072303,0,0,0,4.3661460130771,0,0,0,0,0.506719730950197,0,677.909693892059,0.258937883647172,12.4691396814453,3.12273588179045,7.91610243611567,17.9880087859726,10.7013074792362,14.1106448562846,9.55066094105534,38.5624149665623,3.18118585223806,13.2691582792481,16.985519244478,37.9847411751877,20.8496358848145,7.45567044872489,70.2673912827713,59.4828647350212,19.9256503062701,0,0,0,99.9103564830167,55.3575729410538,25.6334878310243,77.1779981653708,62.650287045931,87.4787667595748,63.1118513333577,2.03678727700633,19.2830804445644,3.28539585963777,123.52936940536,45.672275479909,25.0593293832485,28.9900028986612,44.4579212615359,78.7182295180863,92.8824472065161,83.7693417563976,264.912251636752,2.80238390812695,3.78212160335639,3.87092473160687,5.04150184583422,3.05851974148158,9.05455632957633,8.43706759272568,3.58261680273288,0,0,0,3.10688658803253,5.15957331958412,2.34080679899319,3.55117103377815,2.75469924446365,2.62254091908543,2.79040733700489,2.14618721119695,5.25444040652263,6.08871444679878,26.4309617167343,62.2608457312172,74.1233936246435,75.9643398907035,113.807043108795,84.1159794256509,49.8058323915737,15.5296828002385,0.264450566663544,3.62590025909898,2.55460339046482,6.95884291139304,12.3026950020239,6.0042071838115,10.2721838100782,8.0669940462567,3.12928013975621,14.3261069016154,13.5290400987983,17.1568396664826,9.88701349519644,0,4.77939055810481,3.41402221715547,6.62641373136427,5.63538678365402,11.4044743593376,22.4984885114446,34.576959205927,16.947391949301,76.3144465054543,105.660143837245,79.4677735656395,2766.79236860436,3.00321190288969,8.64859578498093,22.0364870137157,67.75528054376,163.035759992634,322.610954207059,337.17987309235,441.818492961971,490.366683953914,451.432168495893,858.901307218906,825.651683061127,1255.0644445192,1528.46596320669,1891.1786037444,0.739012760666419,2.27389694124582,3.58522948172457,2.37643120085263,2.34690248288502,3.68513766371995,13.0924002487308,1.36593553500459,0.945810864637146,1.99318220683897,0.956728611944923,1.14704320301017,1.38147985492716,0.144649058581512,0,0,39.3411418415229,26.4899276452543,111.743210631503,70.9130703882829,0,131.284882146274,1.57754109708128,0.390438744296638,0.646270193198397,1.19484398976276,1.33679204449436,2.83076530788832,1.61924280669958,0.584511715822624,1.18586333383957,167.729727172183,25.5492153374884,12.1084610493734,2.28041743095006,0.164970122972535,343.809908300504,53.6545205902509,111.859716076958,147.677777448868,136.134172618036,145.109389829534,63.5733601193824,170.49731912495,203.203505679291,237.343605209798,373.181874355496,324.876961231789,4.76615448055303,16.9257428389432,20.568030721458,21.4337035031592,17.9113635978696,20.155676389034,17.2776471632227,16.4411072521884,10.0908834467395,3.60114520468494,1.32317038832977,17.1481703059139,2.42196640043858,7.84068024066026,21.9645112965771,33.3206026482474,6.70405924248657,106.248698052022,0,15.4790150972417,3.70389054739423,0.565105371014073,0.820165366326151,0.457556346413045,0,0,0,33.413471630529,3.16335993581135,20.3319467126849,7.56037385752609,2.09088296014469,8.29777742235475,18.4764154547204,83.893257561216,12.3025292732494,0.129614973291793,0,0,3.88743019714345,3.47462829959905,3.11121901350476,5.42471258606471,10.3063236549375,8.56707842114004,15.8849349509619,0.629156066554265,0,12.0972602628303,0.632022241256357,5.6763060281246,6.16265742988964,4.28738715826724,1.9692936523423,0.79472541912506,0,0.738447635872886,0.100966449948148,0.381034033274999,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,53.7351009168051,5.32766288097755,25.3890214204816,34.4163463546361,0.772758376128762,0,0.549454872801795,1.71494703263253,0,52.5219213633872,44.191222704689,54.9979692901821,34.7143428334249,47.2706938641743,55.1437545094481,41.851395014372,45.9327627288705,39.4233895816258,71.4509230217512,1.45302286617847,10.7736715818278,7.85374586469017,20.664070950805,9.4325923182592,27.2088392506021,37.1152035428697,36.4682051312843,36.9057091030588,33.3560319528213,33.459267585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|short_description=p1@Slc38a3
|short_description=p1@Slc38a3
}}
}}

Latest revision as of 03:41, 26 September 2015

Short description:p1@Slc38a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc38a3_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -1bp_to_ENSMUST00000010208_5end
EntrezGene:Slc38a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc38a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A330.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C273.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B887.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C344.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C316.99
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C8234.89
Mouse Microglia, donor2.CNhs12634.11736-123E8564.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.12
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.40
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1102.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D599.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.95
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F374.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D752.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E481.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E573.16
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I659.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D668.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F668.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7738.24
Mouse hepatocyte, donor1.CNhs13078.11714-123C41620.37
Mouse hepatocyte, donor3.CNhs12615.11637-122C81798.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F41781.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F62426.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7695.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6677.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D712.47
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I117.99
adrenal gland, embryo E18.CNhs11026.1262-18F510.70
adrenal gland, neonate N00.CNhs11191.1311-23C114.11
adrenal gland, neonate N25.CNhs11223.1377-27I39.55
amnion, adult pregnant day17.5.CNhs10488.583-22A838.56
aorta, adult.CNhs10498.46-23H13.18
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F516.99
bone (os femoris), neonate N16.CNhs11225.1525-43A637.98
bone (os femoris), neonate N20.CNhs11195.1350-25C320.85
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B270.27
cerebellum, neonate N30.CNhs11135.1395-42I259.48
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A499.91
corpus striatum, adult.CNhs10487.19-21D855.36
corpus striatum, neonate N00.CNhs11226.630-43F125.63
cortex, adult.CNhs10473.12-14D577.18
cortex, neonate N30.CNhs11107.1392-42F262.65
diencephalon, adult.CNhs10482.20-12F287.48
diencephalon, neonate N30.CNhs11201.1388-42B263.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.28
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G4123.53
eyeball, embryo E12.CNhs11016.345-16C645.67
eyeball, embryo E14.CNhs10521.399-16E225.06
eyeball, embryo E15.CNhs10593.426-16C928.99
eyeball, embryo E17.CNhs11023.1261-18D444.46
eyeball, neonate N00.CNhs11207.633-15C678.72
eyeball, neonate N01.CNhs11140.1532-43E792.88
eyeball, neonate N02.CNhs11205.1551-44G883.77
eyeball, neonate N16.CNhs11188.777-19A2264.91
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E35.25
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G126.43
heart, neonate N16.CNhs11209.782-15G162.26
heart, neonate N20.CNhs11127.821-26I674.12
heart, neonate N25.CNhs11196.1351-25D375.96
heart, neonate N30.CNhs11202.1390-42D2113.81
hippocampus, adult.CNhs10478.13-16E884.12
hippocampus, neonate N00.CNhs11228.627-43G149.81
intestinal mucosa, adult.CNhs10506.860-29I315.53
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D86.96
intestine, embryo E16.CNhs10585.463-22H412.30
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B814.33
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A517.16
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I211.40
kidney, embryo E18.CNhs11001.1288-20C722.50
kidney, neonate N00.CNhs11214.646-21G734.58
kidney, neonate N10.CNhs11206.758-6D516.95
kidney, neonate N20.CNhs11113.832-19I176.31
kidney, neonate N25.CNhs11122.1353-25F3105.66
kidney, neonate N30.CNhs11203.1385-42H179.47
liver, adult pregnant day01.CNhs10466.508-5B22766.79
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E122.04
liver, embryo E15.CNhs10520.433-16D767.76
liver, embryo E16.CNhs10523.462-17F5163.04
liver, embryo E17.CNhs10510.481-18A3322.61
liver, embryo E18.CNhs10579.499-43G4337.18
liver, neonate N00.CNhs11117.641-24F4441.82
liver, neonate N03.CNhs11123.1345-25G2490.37
liver, neonate N06.CNhs11101.684-20A8451.43
liver, neonate N07.CNhs11103.716-20H2858.90
liver, neonate N10.CNhs11115.751-24B9825.65
liver, neonate N20.CNhs11220.823-25A31255.06
liver, neonate N25.CNhs11198.1368-26H11528.47
liver, neonate N30.CNhs11106.1382-42D11891.18
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I613.09
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B639.34
mammary gland, adult pregnant day19.CNhs10476.588-5H226.49
medulla oblongata, adult.CNhs10477.17-12C2111.74
medulla oblongata, neonate N30.CNhs11200.1396-42A370.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2131.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I9167.73
ovary, adult.CNhs10507.91-2I725.55
ovary, embryo E18.CNhs11040.505-44H712.11
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E4343.81
pancreas, embryo E14.CNhs11012.405-44F453.65
pancreas, embryo E15.CNhs11042.1556-45F2111.86
pancreas, embryo E16.CNhs11003.460-26E5147.68
pancreas, embryo E17.CNhs10599.1558-45G3136.13
pancreas, embryo E18.CNhs10580.1535-43I7145.11
pancreas, neonate N00.CNhs11105.645-26G963.57
pancreas, neonate N01.CNhs11138.1531-43D7170.50
pancreas, neonate N02.CNhs11139.1539-43D8203.20
pancreas, neonate N16.CNhs11136.787-43B6237.34
pancreas, neonate N25.CNhs11094.1555-45E2373.18
pancreas, neonate N30.CNhs11182.1548-44H5324.88
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E616.93
pituitary gland, embryo E13.CNhs11009.370-44C720.57
pituitary gland, embryo E14.CNhs11037.398-44A521.43
pituitary gland, embryo E15.CNhs10592.427-16B917.91
pituitary gland, embryo E16.CNhs11036.449-43F620.16
pituitary gland, embryo E17.CNhs11039.1265-44F517.28
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C317.15
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H37.84
skin, neonate N06.CNhs11097.693-20I521.96
skin, neonate N10.CNhs11108.762-6C433.32
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C9106.25
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C115.48
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H633.41
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G820.33
stomach, embryo E16.CNhs11022.459-17D47.56
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C68.30
stomach, neonate N03.CNhs11193.1340-24B818.48
stomach, neonate N07.CNhs11210.718-18A983.89
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G510.31
testis, neonate N00.CNhs11189.1300-22B78.57
testis, neonate N07.CNhs11222.726-26I415.88
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I26.16
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B453.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.39
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G534.42
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A152.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A355.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A447.27
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A555.14
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A745.93
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A839.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A971.45
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H27.85
whole body, embryo E14.5.CNhs10578.420-27D220.66
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F227.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G537.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G536.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G536.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G533.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G533.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.80
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G530.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G529.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G528.61
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G526.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G537.60
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.34
whole body, embryo E17.5.CNhs10513.490-9F940.70
whole body, embryo E17.CNhs10517.475-3I526.48
whole body, embryo E18.CNhs10516.493-3B356.14
whole body, neonate N00.CNhs10525.657-19C264.03
whole body, neonate N01.CNhs10576.659-23C616.07
whole body, neonate N06.CNhs10515.692-21D133.97
whole body, neonate N10.CNhs10518.761-6B428.06





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.52e-1264
neural plate2.52e-1264
presumptive neural plate2.52e-1264
ecto-epithelium3.29e-1273
regional part of nervous system1.40e-1154
ectoderm-derived structure1.40e-1195
ectoderm1.40e-1195
presumptive ectoderm1.40e-1195
neural tube4.35e-1152
neural rod4.35e-1152
future spinal cord4.35e-1152
neural keel4.35e-1152
liver9.39e-1122
epithelial sac9.39e-1122
digestive gland9.39e-1122
epithelium of foregut-midgut junction9.39e-1122
anatomical boundary9.39e-1122
hepatobiliary system9.39e-1122
foregut-midgut junction9.39e-1122
hepatic diverticulum9.39e-1122
liver primordium9.39e-1122
septum transversum9.39e-1122
liver bud9.39e-1122
digestive tract diverticulum2.64e-1023
sac2.64e-1023
pre-chordal neural plate4.73e-1049
exocrine gland7.06e-1025
exocrine system7.06e-1025
central nervous system1.20e-0973
tube1.23e-09114
brain1.94e-0947
future brain1.94e-0947
structure with developmental contribution from neural crest2.48e-0992
regional part of brain5.71e-0946
nervous system1.19e-0875
anatomical conduit3.31e-08122
gray matter4.45e-0834
pancreas1.75e-0712
anterior neural tube3.08e-0740
regional part of forebrain7.59e-0739
forebrain7.59e-0739
future forebrain7.59e-0739
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