FF:11349-117G8: Difference between revisions

Revision as of 20:43, 9 July 2012

Name:	Keratinocyte - epidermal, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skin
dev stage	47 years old adult
sex	female
age	47
cell type	keratinocyte
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1331
catalog number	CA102-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.182
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.235
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.033
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.357
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.281
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.425
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.74
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.411
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	1.224
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.692
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.327
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.0969
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11381

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0821
MA0003.1	MA0003.1	0.309
MA0004.1	MA0004.1	0.649
MA0006.1	MA0006.1	0.399
MA0007.1	MA0007.1	0.199
MA0009.1	MA0009.1	0.0302
MA0014.1	MA0014.1	0.676
MA0017.1	MA0017.1	0.116
MA0018.2	MA0018.2	0.0536
MA0019.1	MA0019.1	0.595
MA0024.1	MA0024.1	0.0249
MA0025.1	MA0025.1	0.917
MA0027.1	MA0027.1	0.6
MA0028.1	MA0028.1	0.943
MA0029.1	MA0029.1	0.235
MA0030.1	MA0030.1	0.416
MA0031.1	MA0031.1	0.0929
MA0035.2	MA0035.2	0.117
MA0038.1	MA0038.1	0.816
MA0039.2	MA0039.2	0.0193
MA0040.1	MA0040.1	0.669
MA0041.1	MA0041.1	0.437
MA0042.1	MA0042.1	0.899
MA0043.1	MA0043.1	0.742
MA0046.1	MA0046.1	0.181
MA0047.2	MA0047.2	0.455
MA0048.1	MA0048.1	0.97
MA0050.1	MA0050.1	1.28438e-6
MA0051.1	MA0051.1	1.26033e-4
MA0052.1	MA0052.1	0.927
MA0055.1	MA0055.1	0.174
MA0057.1	MA0057.1	0.0468
MA0058.1	MA0058.1	0.74
MA0059.1	MA0059.1	0.0348
MA0060.1	MA0060.1	0.175
MA0061.1	MA0061.1	0.298
MA0062.2	MA0062.2	0.747
MA0065.2	MA0065.2	0.00458
MA0066.1	MA0066.1	0.00617
MA0067.1	MA0067.1	0.346
MA0068.1	MA0068.1	9.62886e-4
MA0069.1	MA0069.1	0.513
MA0070.1	MA0070.1	0.325
MA0071.1	MA0071.1	0.602
MA0072.1	MA0072.1	0.306
MA0073.1	MA0073.1	0.677
MA0074.1	MA0074.1	0.97
MA0076.1	MA0076.1	0.434
MA0077.1	MA0077.1	0.851
MA0078.1	MA0078.1	0.495
MA0079.2	MA0079.2	0.839
MA0080.2	MA0080.2	0.114
MA0081.1	MA0081.1	0.549
MA0083.1	MA0083.1	0.972
MA0084.1	MA0084.1	0.268
MA0087.1	MA0087.1	0.874
MA0088.1	MA0088.1	0.247
MA0090.1	MA0090.1	0.0428
MA0091.1	MA0091.1	0.689
MA0092.1	MA0092.1	0.303
MA0093.1	MA0093.1	0.699
MA0099.2	MA0099.2	2.90096e-14
MA0100.1	MA0100.1	0.197
MA0101.1	MA0101.1	0.586
MA0102.2	MA0102.2	0.265
MA0103.1	MA0103.1	4.76312e-5
MA0104.2	MA0104.2	0.292
MA0105.1	MA0105.1	0.157
MA0106.1	MA0106.1	5.50562e-7
MA0107.1	MA0107.1	0.478
MA0108.2	MA0108.2	0.00889
MA0111.1	MA0111.1	0.717
MA0112.2	MA0112.2	0.00563
MA0113.1	MA0113.1	0.209
MA0114.1	MA0114.1	0.0495
MA0115.1	MA0115.1	0.525
MA0116.1	MA0116.1	0.0194
MA0117.1	MA0117.1	0.534
MA0119.1	MA0119.1	0.0941
MA0122.1	MA0122.1	0.608
MA0124.1	MA0124.1	0.742
MA0125.1	MA0125.1	0.273
MA0131.1	MA0131.1	0.218
MA0135.1	MA0135.1	0.0931
MA0136.1	MA0136.1	0.701
MA0137.2	MA0137.2	0.0865
MA0138.2	MA0138.2	0.175
MA0139.1	MA0139.1	0.218
MA0140.1	MA0140.1	0.114
MA0141.1	MA0141.1	0.221
MA0142.1	MA0142.1	0.0144
MA0143.1	MA0143.1	0.731
MA0144.1	MA0144.1	0.999
MA0145.1	MA0145.1	0.0702
MA0146.1	MA0146.1	0.0767
MA0147.1	MA0147.1	0.168
MA0148.1	MA0148.1	0.121
MA0149.1	MA0149.1	0.00684
MA0150.1	MA0150.1	0.0884
MA0152.1	MA0152.1	0.238
MA0153.1	MA0153.1	0.178
MA0154.1	MA0154.1	0.0511
MA0155.1	MA0155.1	0.513
MA0156.1	MA0156.1	0.894
MA0157.1	MA0157.1	0.545
MA0159.1	MA0159.1	0.0789
MA0160.1	MA0160.1	0.183
MA0162.1	MA0162.1	0.125
MA0163.1	MA0163.1	0.0267
MA0164.1	MA0164.1	0.601
MA0258.1	MA0258.1	0.0338
MA0259.1	MA0259.1	0.675

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11381

Novel motif	Logo	P-value
1	1	0.26
10	10	0.706
100	100	0.528
101	101	0.584
102	102	0.466
103	103	0.0815
104	104	0.291
105	105	0.015
106	106	0.0225
107	107	0.0298
108	108	0.422
109	109	0.0103
11	11	0.0883
110	110	0.0931
111	111	0.492
112	112	0.34
113	113	0.649
114	114	0.149
115	115	0.925
116	116	0.385
117	117	0.251
118	118	0.714
119	119	0.164
12	12	0.457
120	120	0.233
121	121	0.642
122	122	0.156
123	123	0.471
124	124	0.758
125	125	0.29
126	126	0.596
127	127	0.0464
128	128	0.199
129	129	0.183
13	13	0.0574
130	130	0.977
131	131	0.334
132	132	0.76
133	133	0.0248
134	134	0.326
135	135	0.609
136	136	0.626
137	137	0.994
138	138	0.284
139	139	0.133
14	14	0.847
140	140	0.219
141	141	0.205
142	142	0.116
143	143	0.128
144	144	0.64
145	145	0.124
146	146	0.044
147	147	0.359
148	148	0.906
149	149	0.556
15	15	0.19
150	150	0.289
151	151	0.345
152	152	0.0439
153	153	0.612
154	154	0.996
155	155	0.677
156	156	0.299
157	157	0.665
158	158	0.568
159	159	0.74
16	16	0.0915
160	160	0.0723
161	161	0.315
162	162	0.134
163	163	0.541
164	164	0.466
165	165	0.985
166	166	0.815
167	167	0.243
168	168	0.397
169	169	0.0461
17	17	0.136
18	18	0.0316
19	19	0.38
2	2	0.239
20	20	0.93
21	21	0.673
22	22	0.223
23	23	0.244
24	24	0.0998
25	25	0.948
26	26	0.19
27	27	0.383
28	28	0.693
29	29	0.324
3	3	0.333
30	30	0.349
31	31	0.545
32	32	0.511
33	33	0.246
34	34	0.579
35	35	0.879
36	36	0.322
37	37	0.232
38	38	0.261
39	39	0.304
4	4	0.431
40	40	0.01
41	41	0.657
42	42	0.453
43	43	0.208
44	44	0.666
45	45	0.264
46	46	0.164
47	47	0.219
48	48	0.0965
49	49	0.273
5	5	0.478
50	50	0.573
51	51	0.611
52	52	0.34
53	53	1
54	54	0.62
55	55	0.462
56	56	0.26
57	57	0.121
58	58	0.456
59	59	0.0736
6	6	0.859
60	60	0.0751
61	61	0.501
62	62	0.451
63	63	0.115
64	64	0.209
65	65	0.148
66	66	0.327
67	67	0.671
68	68	0.828
69	69	0.102
7	7	0.2
70	70	0.00229
71	71	0.0795
72	72	0.625
73	73	0.0339
74	74	0.105
75	75	0.129
76	76	0.919
77	77	0.0539
78	78	0.197
79	79	0.928
8	8	0.0896
80	80	0.548
81	81	0.608
82	82	0.368
83	83	0.645
84	84	0.552
85	85	0.128
86	86	0.958
87	87	0.121
88	88	0.214
89	89	0.0125
9	9	0.656
90	90	0.882
91	91	0.477
92	92	0.417
93	93	0.886
94	94	0.532
95	95	0.0931
96	96	0.803
97	97	0.927
98	98	0.0753
99	99	0.07

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11381

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000082 human epidermal keratinocyte sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0000325 (stuff accumulating cell)
0000240 (stratified squamous epithelial cell)
0000311 (keratin accumulating cell)
0000079 (stratified epithelial cell)
0000312 (keratinocyte)
0000237 (keratinizing barrier epithelial cell)
0000362 (epidermal cell)
0002159 (general ecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001003 (skin epidermis)
0002097 (skin of body)
0002199 (integument)
0000483 (epithelium)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003102 (surface structure)
0007376 (outer epithelium)
0010371 (ecto-epithelium)
0010317 (germ layer / neural crest derived structure)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000082 (human epidermal keratinocyte sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000357 (stratified epithelial stem cell)
CL:0000114 (surface ectodermal cell)
CL:0000221 (ectodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr17:7493405..7493419,-!p1@SOX15!2.47!293.37!SOX15;;chr1:209979467..209979494,-!p1@IRF6!2.09!136.01!IRF6;;chr1:209979411..209979433,-!p2@IRF6!1.96!89.92!IRF6;;chr15:101069113..101069169,-!p1@CERS3!1.81!62.94!CERS3;;chr1:6479968..6479986,-!p1@HES2!1.77!57.32!HES2;;chr6:10415276..10415341,-!p2@TFAP2A!1.76!68.57!TFAP2A;;chr3:189507432..189507459,+!p1@TP63!1.68!47.21!TP63;;chr12:54785054..54785072,-!p4@ZNF385A!1.65!49.46!ZNF385A;;chr11:34642612..34642646,+!p1@EHF!1.65!43.84!EHF;;chr3:111314186..111314204,-!p1@ZBED2!1.61!39.34!ZBED2;;chr17:7492684..7492778,-!p2@SOX15!1.56!73.06!SOX15;;chr12:54785074..54785122,-!p2@ZNF385A!1.50!46.08!ZNF385A;;chr6:10415484..10415508,-!p3@TFAP2A!1.50!30.35!TFAP2A;;chr6:1312325..1312340,+!p1@FOXQ1!1.49!48.33!FOXQ1;;chr15:83953397..83953425,-!p1@BNC1!1.48!33.72!BNC1;;chr20:22565185..22565223,-!p3@FOXA2!1.43!25.85!FOXA2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.37!22.48!ZBED1;;chr17:80797886..80797906,-!p1@ZNF750!1.35!21.36!ZNF750;;chr6:10419768..10419819,-!p6@TFAP2A!1.30!19.11!TFAP2A;;chr20:22564895..22564910,-!p1@FOXA2!1.30!19.11!FOXA2;;chr19:45908292..45908374,-!p1@PPP1R13L!1.25!146.12!PPP1R13L;;chr6:10412600..10412637,-!p1@TFAP2A!1.25!28.10!TFAP2A;;chr2:46524897..46524911,+!p2@EPAS1!1.24!44.96!EPAS1;;chr1:24645832..24645853,+!p1@GRHL3!1.22!15.74!GRHL3;;chr8:128748308..128748324,+!p2@MYC!1.19!396.78!MYC;;chr17:46132044..46132080,+!p4@NFE2L1!1.19!14.61!NFE2L1;;chr8:10588010..10588030,-!p1@SOX7!1.16!13.49!SOX7;;chr13:73633131..73633149,+!p1@KLF5!1.14!137.13!KLF5;;chr5:2751762..2751784,-!p1@IRX2!1.13!12.36!IRX2;;chr8:102504651..102504683,+!p1@GRHL2!1.13!12.36!GRHL2;;chr20:22565370..22565388,-!p2@FOXA2!1.13!12.36!FOXA2;;chr4:57547454..57547469,-!p1@HOPX!1.13!12.36!HOPX;;chr17:41623692..41623715,-!p1@ETV4!1.10!49.46!ETV4;;chr14:90085820..90085840,-!p6@FOXN3!1.09!11.24!FOXN3;;chr2:122042770..122042785,-!p1@TFCP2L1!1.09!11.24!TFCP2L1;;chr5:2751785..2751808,-!p2@IRX2!1.09!11.24!IRX2;;chr11:65686802..65686818,+!p6@DRAP1!1.08!19.11!DRAP1;;chr14:21566731..21566836,-!p1@ZNF219!1.06!112.40!ZNF219;;chr20:55204351..55204377,+!p1@TFAP2C!1.06!13.49!TFAP2C;;chr11:65554528..65554546,+!p1@OVOL1!1.05!10.12!OVOL1;;chr3:111314230..111314241,-!p2@ZBED2!1.05!10.12!ZBED2;;chr12:48298765..48298783,-!p2@VDR!1.02!20.23!VDR;;chr17:41623009..41623053,-!p4@ETV4!1.00!14.61!ETV4;;chr11:65667846..65667868,-!p1@FOSL1!0.98!231.55!FOSL1;;chr8:128747757..128747800,+!p7@MYC!0.96!11.24!MYC;;chr15:101069102..101069112,-!p2@CERS3!0.95!7.87!CERS3;;chr17:45928443..45928473,-!p2@SP6!0.95!7.87!SP6;;chr1:209979449..209979460,-!p3@IRF6!0.95!7.87!IRF6;;chr12:66218255..66218304,+!p3@HMGA2!0.94!21.36!HMGA2;;chr20:50721803..50721857,-!p2@ZFP64!0.90!11.24!ZFP64;;chr16:54320101..54320125,-!p4@IRX3!0.90!10.12!IRX3;;chr15:101069186..101069200,-!p4@CERS3!0.89!6.74!CERS3;;chr6:10412576..10412599,-!p5@TFAP2A!0.89!6.74!TFAP2A;;chr1:24645921..24645973,+!p2@GRHL3!0.89!6.74!GRHL3;;chr10:8095593..8095625,+!p3@GATA3!0.88!7.87!GATA3;;chr12:66218212..66218244,+!p5@HMGA2!0.85!8.99!HMGA2;;chr6:106546808..106546833,+!p3@PRDM1!0.85!7.87!PRDM1;;chr11:65667884..65667895,-!p2@FOSL1!0.83!23.60!FOSL1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.82!432.75!TAX1BP3;;chr11:47236584..47236679,+!p1@DDB2!0.82!65.19!DDB2;;chr19:45579725..45579743,-!p1@ZNF296!0.82!26.98!ZNF296;;chr16:67881588..67881612,-!p2@CENPT!0.82!7.87!CENPT;;chr8:128747661..128747703,+!p6@MYC!0.82!7.87!MYC;;chr6:1312155..1312187,+!p2@FOXQ1!0.82!5.62!FOXQ1;;chr6:34524093..34524135,-!p1@SPDEF!0.82!5.62!SPDEF;;chr1:209979375..209979386,-!p4@IRF6!0.82!5.62!IRF6;;chr1:2461692..2461710,-!p1@HES5!0.82!5.62!HES5;;chr11:129245526..129245553,+!p1@BARX2!0.82!5.62!BARX2;;chr18:3447536..3447542,+!p23@TGIF1!0.82!5.62!TGIF1;;chr6:34204672..34204692,+!p1@HMGA1!0.80!654.18!HMGA1;;chr1:8938766..8938774,-!p2@ENO1!0.80!397.90!ENO1;;chr16:2059754..2059777,-!p2@ZNF598!0.80!20.23!ZNF598;;chr17:38256799..38256815,-!p3@NR1D1!0.80!10.12!NR1D1;;chr7:148892653..148892729,+!p1@ZNF282!0.78!79.81!ZNF282;;chr11:65687362..65687436,+!p3@DRAP1!0.78!24.73!DRAP1;;chr17:41622925..41622976,-!p3@ETV4!0.78!7.87!ETV4;;chr8:49833948..49833973,-!p2@SNAI2!0.77!33.72!SNAI2;;chr2:46524878..46524891,+!p3@EPAS1!0.77!8.99!EPAS1;;chr17:41623075..41623101,-!p9@ETV4!0.76!5.62!ETV4;;chr12:66218598..66218645,+!p2@HMGA2!0.75!23.60!HMGA2;;chr11:65686732..65686756,+!p2@DRAP1!0.75!21.36!DRAP1;;chr17:45928521..45928539,-!p1@SP6!0.74!4.50!SP6;;chr19:45908278..45908282,-!p5@PPP1R13L!0.74!4.50!PPP1R13L;;chr22:24093154..24093183,-!p2@ZNF70!0.74!4.50!ZNF70;;chr2:63277948..63277974,+!p1@OTX1!0.74!4.50!OTX1;;chr3:138665969..138665993,-!p2@FOXL2!0.74!4.50!FOXL2;;chr5:1887070..1887114,-!p1@IRX4!0.74!4.50!IRX4;;chr6:10419824..10419840,-!p9@TFAP2A!0.74!4.50!TFAP2A;;chr8:10588174..10588200,-!p3@SOX7!0.74!4.50!SOX7;;chr8:128748470..128748487,+!p1@MYC!0.73!539.53!MYC;;chr7:148892629..148892651,+!p2@ZNF282!0.73!29.22!ZNF282;;chr14:74353454..74353469,+!p4@ZNF410!0.73!8.99!ZNF410;;chr17:41622765..41622821,-!p2@ETV4!0.72!6.74!ETV4;;chr1:8938709..8938720,-!p3@ENO1!0.71!227.05!ENO1;;chr12:48298785..48298828,-!p1@VDR!0.71!24.73!VDR;;chr11:62369229..62369289,-!p2@MTA2!0.70!67.44!MTA2;;chr17:38256822..38256851,-!p1@NR1D1!0.70!35.97!NR1D1;;chr8:145159324..145159333,+!p5@MAF1!0.70!8.99!MAF1;;chr6:34204642..34204664,+!p2@HMGA1!0.69!600.23!HMGA1;;chr12:57914286..57914304,-!p1@DDIT3!0.69!161.86!DDIT3;;chr1:8938736..8938756,-!p1@ENO1!0.68!4805.17!ENO1;;chr2:239756671..239756732,+!p1@TWIST2!0.68!13.49!TWIST2;;chr7:27135591..27135658,-!p1@HOXA1!0.68!7.87!HOXA1;;chr17:41623259..41623278,-!p7@ETV4!0.68!4.50!ETV4;;chr12:53614115..53614154,-!p1@RARG!0.67!22.48!RARG;;chr2:239756739..239756755,+!p2@TWIST2!0.67!6.74!TWIST2;;chr9:110252035..110252057,-!p1@KLF4!0.66!66.32!KLF4;;chr17:41622834..41622883,-!p6@ETV4!0.66!4.50!ETV4;;chr10:8096631..8096660,+!p1@GATA3!0.66!4.50!GATA3;;chr12:66218003..66218018,+!p9@HMGA2!0.66!4.50!HMGA2;;chr16:4322832..4322907,-!p1@TFAP4!0.65!30.35!TFAP4;;chr10:104155480..104155534,+!p2@NFKB2!0.65!25.85!NFKB2;;chr2:70314240..70314256,+!p4@PCBP1!0.65!7.87!PCBP1;;chr20:48807548..48807572,+!p14@CEBPB!0.65!4.50!CEBPB;;chr17:3571887..3571918,-!p2@TAX1BP3!0.64!43.84!TAX1BP3;;chr17:70117153..70117174,+!p1@SOX9!0.64!40.46!SOX9;;chr12:53625966..53626012,-!p2@RARG!0.64!10.12!RARG;;chr11:47270436..47270464,+!p2@NR1H3!0.64!7.87!NR1H3;;chr18:3449720..3449749,+!p2@TGIF1!0.64!7.87!TGIF1;;chr17:47492203..47492214,-!p3@PHB!0.64!5.62!PHB;;chr17:46131916..46131952,+!p7@NFE2L1!0.64!3.37!NFE2L1;;chr5:1887052..1887065,-!p2@IRX4!0.64!3.37!IRX4;;chr6:10415263..10415274,-!p8@TFAP2A!0.64!3.37!TFAP2A;;chr6:106546786..106546802,+!p6@PRDM1!0.64!3.37!PRDM1;;chr6:34524025..34524045,-!p3@SPDEF!0.64!3.37!SPDEF;;chr9:100615499..100615519,+!p1@FOXE1!0.64!3.37!FOXE1;;chr1:24646263..24646277,+!p4@GRHL3!0.64!3.37!GRHL3;;chr20:18038486..18038520,-!p2@OVOL2!0.64!3.37!OVOL2;;chr20:18038521..18038571,-!p1@OVOL2!0.64!3.37!OVOL2;;chr2:63277978..63277995,+!p2@OTX1!0.64!3.37!OTX1;;chr4:299227..299272,-!p1@ZNF732!0.64!3.37!ZNF732;;chr8:48650715..48650735,-!p1@CEBPD!0.63!492.32!CEBPD;;chr11:62369291..62369351,-!p1@MTA2!0.63!71.94!MTA2;;chr18:47807845..47807918,-!p1@MBD1!0.63!68.57!MBD1;;chr11:62369204..62369217,-!p7@MTA2!0.63!7.87!MTA2;;chr5:72744594..72744609,-!p1@FOXD1!0.62!16.86!FOXD1;;chr7:148892581..148892604,+!p3@ZNF282!0.62!11.24!ZNF282;;chr17:61920116..61920131,-!p5@SMARCD2!0.62!6.74!SMARCD2;;chr11:65686952..65686975,+!p5@DRAP1!0.61!20.23!DRAP1;;chr16:8962544..8962584,-!p2@CARHSP1!0.61!7.87!CARHSP1;;chr1:10754477..10754517,-!p1@CASZ1!0.61!5.62!CASZ1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.60!44.96!ZC3H12A;;chr19:57946684..57946723,+!p1@ZNF749!0.60!39.34!ZNF749;;chr7:28448965..28448994,+!p2@CREB5!0.60!12.36!CREB5;;chr22:29196547..29196563,-!p2@XBP1!0.59!129.26!XBP1;;chr20:48807875..48807982,+!p2@CEBPB!0.59!77.56!CEBPB;;chr12:124827609..124827643,-!p9@NCOR2!0.59!4.50!NCOR2;;chr16:54964740..54964789,+!p1@IRX5!0.59!4.50!IRX5;;chr1:158979792..158979814,+!p2@IFI16!0.58!32.60!IFI16;;chr12:80084737..80084763,-!p3@PAWR!0.58!12.36!PAWR;;chr19:56652621..56652641,+!p2@ZNF444!0.58!6.74!ZNF444;;chr2:60778035..60778060,-!p4@BCL11A!0.57!3.37!BCL11A;;chr20:48807351..48807384,+!p1@CEBPB!0.56!338.33!CEBPB;;chr2:70142232..70142251,+!p1@MXD1!0.56!17.98!MXD1;;chr2:242576641..242576731,-!p2@THAP4!0.56!12.36!THAP4;;chrX:48900782..48900793,-!p3@TFE3!0.56!5.62!TFE3;;chr19:58341656..58341694,+!p5@ZNF587!0.56!3.37!ZNF587;;chr18:3450161..3450183,+!p1@TGIF1!0.55!111.28!TGIF1;;chr6:34204921..34204939,+!p3@HMGA1!0.55!96.67!HMGA1;;chr19:19303731..19303783,+!p1@RFXANK!0.55!76.43!RFXANK;;chr11:62369383..62369399,-!p6@MTA2!0.55!6.74!MTA2;;chr10:104155659..104155676,+!p4@NFKB2!0.55!3.37!NFKB2;;chr5:72744562..72744573,-!p3@FOXD1!0.55!3.37!FOXD1;;chr1:149858461..149858479,+!p1@BOLA1!0.54!1248.78!BOLA1;;chr8:49833978..49833996,-!p1@SNAI2!0.54!65.19!SNAI2;;chr12:66218836..66218888,+!p1@HMGA2!0.54!29.22!HMGA2;;chr16:2059797..2059837,-!p1@ZNF598!0.54!12.36!ZNF598;;chr1:154975258..154975330,+!p1@ZBTB7B!0.54!11.24!ZBTB7B;;chr14:74353576..74353589,+!p3@ZNF410!0.54!10.12!ZNF410;;chr11:65687222..65687240,+!p7@DRAP1!0.54!3.37!DRAP1;;chr8:145515263..145515299,+!p1@HSF1!0.53!222.56!HSF1;;chr12:132628963..132629027,+!p1@NOC4L!0.53!44.96!NOC4L;;chr12:3068544..3068597,+!p1@TEAD4!0.53!17.98!TEAD4;;chr11:46722560..46722595,+!p1@ZNF408!0.53!15.74!ZNF408;;chr12:7079780..7079791,-!p2@PHB2!0.53!15.74!PHB2;;chr11:62369108..62369183,-!p3@MTA2!0.52!38.22!MTA2;;chr2:28618532..28618610,+!p4@FOSL2!0.52!4.50!FOSL2;;chr14:21566540..21566580,-!p2@ZNF219!0.52!3.37!ZNF219;;chrX:129402754..129402766,-!p3@ZNF280C!0.52!3.37!ZNF280C;;chr19:33865009..33865090,+!p3@CEBPG!0.52!3.37!CEBPG;;chrX:48900871..48900890,-!p1@TFE3!0.51!151.74!TFE3;;chr2:27357479..27357524,-!p1@PREB!0.51!84.30!PREB;;chr11:64073022..64073056,+!p1@ESRRA!0.51!34.84!ESRRA;;chr16:88519669..88519726,+!p1@ZFPM1!0.51!25.85!ZFPM1;;chr4:4291837..4291859,-!p2@LYAR!0.51!8.99!LYAR;;chr1:154975110..154975149,+!p2@ZBTB7B!0.51!5.62!ZBTB7B;;chr19:45908286..45908291,-!p3@PPP1R13L!0.51!2.25!PPP1R13L;;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@RERE!0.14!1.12!RERE;;chr20:49547554..49547563,-!p6@ADNP!0.14!1.12!ADNP;;chr7:128577972..128578047,+!p1@IRF5!0.14!1.12!IRF5;;chr7:148823485..148823510,+!p4@ZNF398!0.14!1.12!ZNF398;;chr17:17740287..17740307,-!p1@SREBF1!0.13!31.47!SREBF1;;chr16:31085714..31085783,+!p1@ZNF646!0.13!19.11!ZNF646;;chr6:35464817..35464894,-!p1@TEAD3!0.13!17.98!TEAD3;;chr22:41601296..41601355,+!p1@L3MBTL2!0.13!13.49!L3MBTL2;;chr19:44100728..44100804,+!p1@SRRM5,p1@ZNF576!0.13!11.24!ZNF576;;chr15:85291544..85291598,+!p2@ZNF592!0.13!6.74!ZNF592;;chr16:3450963..3451019,-!p1@ZNF434!0.13!6.74!ZNF434;;chr10:104154246..104154347,+!p3@NFKB2!0.13!6.74!NFKB2;;chr19:58400372..58400411,-!p1@ZNF814!0.13!5.62!ZNF814;;chr2:28616358..28616380,+!p3@FOSL2!0.13!5.62!FOSL2;;chr19:19496577..19496619,+!p5@GATAD2A!0.13!3.37!GATAD2A;;chr19:6110555..6110617,-!p2@RFX2!0.13!3.37!RFX2;;chr1:23694794..23694863,-!p1@ZNF436!0.13!3.37!ZNF436;;chr14:35872962..35873025,-!p3@NFKBIA!0.13!2.25!NFKBIA;;chr11:130184644..130184662,-!p5@ZBTB44!0.13!1.12!ZBTB44;;chr12:50479101..50479108,+!p3@SMARCD1!0.13!1.12!SMARCD1;;chr12:6798692..6798723,-!p5@ZNF384!0.13!1.12!ZNF384;;chr1:27022578..27022589,+!p5@ARID1A!0.13!1.12!ARID1A;;chr1:8763510..8763538,-!p15@RERE!0.13!1.12!RERE;;chr21:36260343..36260402,-!p6@RUNX1!0.13!1.12!RUNX1;;chr2:217277271..217277290,+!p3@SMARCAL1!0.13!1.12!SMARCAL1;;chr3:150126101..150126118,+!p6@TSC22D2!0.13!1.12!TSC22D2;;chr3:71114279..71114308,-!p13@FOXP1!0.13!1.12!FOXP1;;chr4:103422457..103422469,+!p3@NFKB1!0.13!1.12!NFKB1;;chr16:3185051..3185068,+!p3@ZNF213!0.13!1.12!ZNF213;;chr19:12551785..12551823,-!p1@ZNF443!0.13!1.12!ZNF443;;chr6:27356745..27356777,+!p1@ZNF391!0.13!1.12!ZNF391;;chr6:28303901..28303944,-!p2@ZNF323!0.13!1.12!ZNF323;;chr12:53845879..53845894,+!p1@PCBP2!0.12!834.02!PCBP2;;chr19:1652575..1652621,-!p1@TCF3!0.12!44.96!TCF3;;chr19:3572925..3573014,+!p1@HMG20B!0.12!34.84!HMG20B;;chr19:56152361..56152434,+!p1@ZNF580!0.12!31.47!ZNF580;;chr1:16302565..16302605,-!p1@ZBTB17!0.12!20.23!ZBTB17;;chr6:155635583..155635644,-!p1@TFB1M!0.12!14.61!TFB1M;;chr1:151319710..151319774,-!p1@RFX5!0.12!11.24!RFX5;;chr19:9546177..9546224,-!p1@ZNF266!0.12!7.87!ZNF266;;chr8:144329092..144329140,+!p1@ZFP41!0.12!7.87!ZFP41;;chrX:129244454..129244488,-!p1@ELF4!0.12!7.87!ELF4;;chr12:96588219..96588263,+!p2@ELK3!0.12!7.87!ELK3;;chr9:139294614..139294633,-!p@chr9:139294614..139294633,-!0.12!6.74!SNAPC4;;chr1:935467..935484,-!p1@HES4!0.12!4.50!HES4;;chr16:30569678..30569720,-!p1@ZNF764!0.12!3.37!ZNF764;;chr17:46125685..46125699,+!p3@NFE2L1!0.12!3.37!NFE2L1;;chr16:89787937..89787971,+!p1@ZNF276!0.12!2.25!ZNF276;;chr19:20150301..20150321,-!p1@ZNF682!0.12!2.25!ZNF682;;chr19:31840313..31840380,-!p1@TSHZ3!0.12!2.25!TSHZ3;;chr19:46271505..46271575,-!p2@SIX5!0.12!2.25!SIX5;;chr1:33938236..33938267,+!p1@ZSCAN20!0.12!2.25!ZSCAN20;;chr6:126240380..126240430,+!p2@NCOA7!0.12!2.25!NCOA7;;chr1:151431811..151431832,-!p3@POGZ!0.12!1.12!POGZ;;chr1:204042723..204042784,+!p3@SOX13!0.12!1.12!SOX13;;chr1:205649614..205649663,-!p1@SLC45A3,p5@ELK4!0.12!1.12!ELK4;;chr20:48807615..48807644,+!p6@CEBPB!0.12!1.12!CEBPB;;chr15:96875657..96875760,+!p14@NR2F2!0.12!1.12!NR2F2;;chr19:11877805..11877832,+!p2@ZNF441!0.12!1.12!ZNF441;;chr9:94186085..94186096,-!p3@NFIL3!0.12!1.12!NFIL3;;chr9:137218262..137218273,+!p5@RXRA!0.12!1.12!RXRA;;chr14:64970401..64970423,-!p7@ZBTB25!0.12!1.12!ZBTB25;;chr8:102217817..102217936,-!p1@ZNF706!0.11!53.95!ZNF706;;chr2:74374995..74375055,-!p1@BOLA3!0.11!51.70!BOLA3;;chr2:220094514..220094599,+!p1@ANKZF1!0.11!33.72!ANKZF1;;chr3:179040767..179040866,+!p1@ZNF639!0.11!11.24!ZNF639;;
+|ffid_belonging_in_development=CL:0000357,CL:0000114,CL:0000221
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11349-117G8: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:43, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0