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FFCP PHASE1:Mm9::chr19:60937293..60937365,-: Difference between revisions

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|id=chr19:60937293..60937365,-
|id=chr19:60937293..60937365,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0000033!1.67e-19!63;UBERON:0002346!2.17e-19!71;UBERON:0003075!2.17e-19!71;UBERON:0007284!2.17e-19!71;UBERON:0001049!8.90e-17!52;UBERON:0005068!8.90e-17!52;UBERON:0006241!8.90e-17!52;UBERON:0007135!8.90e-17!52;UBERON:0000955!1.66e-16!50;UBERON:0006238!1.66e-16!50;UBERON:0002616!6.59e-16!49;UBERON:0003056!1.42e-15!49;UBERON:0000153!4.47e-15!94;UBERON:0001017!5.21e-15!73;UBERON:0005743!5.21e-15!73;UBERON:0000073!6.11e-14!75;UBERON:0001016!6.11e-14!75;UBERON:0004121!1.12e-13!102;UBERON:0000924!1.12e-13!102;UBERON:0006601!1.12e-13!102;UBERON:0007811!2.34e-13!86;UBERON:0003080!1.18e-12!40;UBERON:0002780!4.66e-12!39;UBERON:0001890!4.66e-12!39;UBERON:0006240!4.66e-12!39;UBERON:0002020!6.31e-10!34;UBERON:0000025!2.42e-08!114;UBERON:0004111!2.49e-08!122;UBERON:0002791!6.68e-08!29;UBERON:0003528!6.68e-08!29;UBERON:0001893!6.68e-08!29;UBERON:0002021!7.27e-07!10;UBERON:0000411!7.27e-07!10;UBERON:0001950!7.27e-07!10;UBERON:0000956!8.91e-07!21;UBERON:0001869!8.91e-07!21;UBERON:0000203!8.91e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.70e-22,92;UBERON:0002346,6.27e-20,64;UBERON:0003075,6.27e-20,64;UBERON:0007284,6.27e-20,64;UBERON:0000073,2.81e-18,54;UBERON:0001049,7.83e-17,52;UBERON:0005068,7.83e-17,52;UBERON:0006241,7.83e-17,52;UBERON:0007135,7.83e-17,52;UBERON:0010371,5.98e-16,73;UBERON:0003056,1.26e-15,49;UBERON:0001017,5.97e-15,73;UBERON:0000955,1.38e-14,47;UBERON:0006238,1.38e-14,47;UBERON:0002616,5.28e-14,46;UBERON:0001016,8.47e-14,75;UBERON:0004121,2.62e-13,95;UBERON:0000924,2.62e-13,95;UBERON:0006601,2.62e-13,95;UBERON:0003080,1.08e-12,40;UBERON:0002780,4.26e-12,39;UBERON:0001890,4.26e-12,39;UBERON:0006240,4.26e-12,39;UBERON:0002020,5.88e-10,34;UBERON:0000025,2.67e-08,114;UBERON:0004111,2.74e-08,122;UBERON:0003528,6.33e-08,29;UBERON:0002791,6.33e-08,29;UBERON:0001893,6.33e-08,29;UBERON:0002021,6.95e-07,10;UBERON:0000411,6.95e-07,10;UBERON:0001950,6.95e-07,10;UBERON:0000956,8.52e-07,21;UBERON:0001869,8.52e-07,21;UBERON:0000203,8.52e-07,21
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|phase1_expression=5.2849119544582,0,0,0,0,0,0,1.42035655785734,0.563154888606667,0.70219357896598,0.34243593645101,0,2.9104124088305,1.57356724354195,3.33109761815663,1.21485160433896,0,5.36285681109004,6.03303507865251,5.94145512517242,7.39876624314307,0.695036658406197,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,1.27006134691926,3.07532393792285,0,0,0,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,2.42755176515577,5.28766635497425,4.66333883609767,3.12029478674859,2.34717403304412,2.61630187656536,1.97717564461025,4.08302788055995,2.2397827460058,1.43752564364972,5.03347818173209,2.17608642603403,4.03312558970957,3.08711323243136,2.86533439938757,2.57836046138721,2.83243045203437,6.34789175126439,4.43681982454325,1.35537812827653,1.77858959222228,0.899899717281399,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,5.39185984004084,4.86021377994086,4.6271491497304,9.71213346972932,15.0190607847097,4.28717797252339,4.2172007248024,6.43453150627015,19.82085857989,21.4514727983115,23.962619187974,2.50583946687368,3.93396867490361,2.6045668527838,24.8472869111229,24.1987922313622,27.1980881042722,9.72274332063103,12.6710795911202,5.21918448310842,0.832988126665025,2.49386148352392,4.05810284182349,0,0,0,0,0.448026887097336,4.0728881838208,7.6693645160126,6.23486411046885,6.36011234118612,6.4787973097273,6.41632387071589,5.09610479413291,7.11066703153331,0.432982082022428,0.253359865475099,1.01104889002957,2.62622923353838,7.25026074212081,6.53145411885229,3.29622120855658,3.95805121805784,4.38169444786511,4.97384713823654,5.17390311397101,3.64433114856059,2.71914464507811,7.51916655983541,1.76922110389975,3.88240439873782,3.97514733228708,2.90925151881133,0,16.6885054296582,18.431310199584,1.02182822083437,2.87556298814209,1.79970819298022,2.28726408731516,17.0761328921498,19.2150253183823,4.90051973240171,14.7750672163435,8.95004100656157,20.3632283668369,17.5220564113178,5.49932564791708,3.4833951770826,3.79084137650512,5.26104639716185,5.33493816147085,5.51765050640335,6.84236093260327,7.83665052745718,6.80364991513279,7.81493693737584,7.40243624021858,12.1590584247337,5.82033580918674,5.29497024469894,7.38994721488585,5.91828477554452,5.28289773528636,3.83077383174383,6.1734640922383,6.56813080501028,1.40442637462647,2.31613116403244,3.40996199274711,5.79952163099405,5.62862543954631,5.04173772090842,5.68187365404505,6.68998387941173,4.31947916084659,4.18561100550734,4.02410102099429,5.3712057488898,6.41783414662574,7.55170334763838,7.37726166867287,7.74859933354261,8.34290438105992,8.72341721942416,14.930586348053,7.61494131606705,0,0.793351699990633,4.26576501070468,6.27039014023184,2.96395161040815,3.02525286935014,1.33426826306922,1.90225626112559,1.42358718463353,2.14108641141214,1.25667604400135,2.58643413653496,1.9496408711912,0,1.94524244887225,0.597423819763102,6.2590407314517,6.16941968092536,2.25415471346161,7.73875045812194,6.98228953803453,4.76923575254166,8.22074982615345,6.34723636312289,6.27994911365499,5.92306386824642,0.592905254174298,1.50160595144485,2.35870794135844,1.34917267430912,0.811440485554012,0.72353147925725,1.52775511068852,0.863088412352432,1.13494658742525,0.823684239564244,0,1.11642284300551,1.24815069245824,0,0.896987067609561,0.482443521363367,4.98833613449833,3.60033682363921,4.88894929326078,3.73439188705414,6.10194645550105,4.18765643604539,5.71304738126433,3.12213836572478,6.30540576424764,3.5434350343804,6.69710028361446,4.7520361267564,5.35323443784276,6.50920763616802,3.01582567878545,0,0.983528546038072,1.37968373152366,17.5000143086693,16.7612711826851,3.11476396215683,2.7771801992481,5.67914794949262,3.90438744296638,4.95473814785438,3.82350076724083,3.56477878531831,3.96307143104365,3.23848561339915,4.67609372658099,2.37172666767914,15.4234231882467,7.38088443082997,5.34196811001766,4.56083486190013,7.09371528781903,0,5.58395463156457,4.53485335447127,3.77210159511796,2.36241514304618,4.61152721915891,3.10113951801865,5.08947221268508,2.49548164869305,0.632073515871632,2.10837217149998,1.03135543248187,20.0859367394735,9.00305470156551,6.98536892426874,7.71613326113732,7.09360934569094,6.95638388648075,10.3665882979336,4.87143918583359,1.64270195644597,3.60114520468494,1.7642271844397,1.97863503529776,2.9063596805263,2.77439454669517,1.19372344003136,1.47726809770555,0.874442509889552,13.9068976507882,2.9048049735635,4.74689796315412,2.03713980106683,1.88368457004691,2.32380187125743,1.83022538565218,2.88963330989554,1.95932033253121,3.04039942369732,1.90934123603023,4.9032079005076,5.69294507955176,3.56417624711944,3.76358932826044,3.49380101993884,2.29269388854195,1.32245529160537,1.83229159388821,0.648074866458964,3.10669656543463,1.12738587736838,7.17679421011098,5.62558867554132,4.86127970860119,4.77891346867605,8.78571852552046,8.56707842114004,5.07797100891405,5.45268591013696,3.14059357073808,3.74439008135225,3.79213344753814,5.47358081283443,4.41657115808757,5.3267537420896,2.68540043501222,2.78153896693771,3.24527713703916,2.21534290761866,4.64445669761479,3.35309949281999,3.62974266492626,3.11865218367208,2.88635524920988,3.62318396762864,4.53460767230423,0.887943813496259,0.62799699626633,1.34307693091263,7.14801497919105,2.43987218086537,3.29672923681077,1.50057865355346,4.01257683228291,8.471277639256,13.8097570952153,12.0308057822273,15.2949332285882,16.4419804744954,10.5755145634558,11.4753825039407,16.6618845192962,16.3131267234314,8.80192529978094,5.08558003162466,4.38927360741134,5.29274177837816,4.61902762429759,3.5634237646757,2.75765262675021,7.3341420174533,4.12070114477788,2.24643446714271,6.57012750585873,5.83002389747551,6.03604292435444,6.08669798554236,5.12201219238954,4.93945033018274,4.28664322154766,4.51948871184936,5.01563973205633,4.53294490883637,6.03515572551029,3.42869252385415,4.2594193478241,5.7224685587357,5.0871245821315,6.58765662907314,4.90764725771724,5.67076715905595,6.31367307450823,6.51859746460137,2.24456908663095,4.86403574309114,5.02372860115374,5.32000356120596,3.56354734727722,4.82266527452853,5.24602213669686,2.8071793013449,3.43793686477277,5.16478496585877,3.75005412503176,6.72416723299222
|short_description=p1@Sfxn4
|short_description=p1@Sfxn4
}}
}}

Revision as of 18:26, 13 November 2012

Short description:p1@Sfxn4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sfxn4_5end
Coexpression cluster:MCL_coexpression_mm9:937
Association with transcript: 0bp_to_ENSMUST00000080806, ENSMUST00000124921, NM_053198, uc008icc.2, uc012boi.1, uc012boj.1_5end
EntrezGene:Sfxn4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Sfxn4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.02
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.85
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H17.52
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.69
cerebellum, neonate N30.CNhs11135.1395-42I218.43
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A417.08
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D514.78
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F220.36
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C66.80
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G87.40
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B56.17
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G17.55
heart, neonate N16.CNhs11209.782-15G17.38
heart, neonate N20.CNhs11127.821-26I67.75
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D28.72
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D56.27
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I27.74
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G74.77
kidney, neonate N10.CNhs11206.758-6D58.22
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F36.28
kidney, neonate N30.CNhs11203.1385-42H15.92
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C217.50
medulla oblongata, neonate N30.CNhs11200.1396-42A316.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I77.38
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E69.00
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A57.72
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C913.91
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D43.56
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F57.18
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I54.78
testis, embryo E18.CNhs11027.503-18G58.79
testis, neonate N00.CNhs11189.1300-22B78.57
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D95.45
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D33.35
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A23.12
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I85.09
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.70e-2292
neurectoderm6.27e-2064
neural plate6.27e-2064
presumptive neural plate6.27e-2064
regional part of nervous system2.81e-1854
neural tube7.83e-1752
neural rod7.83e-1752
future spinal cord7.83e-1752
neural keel7.83e-1752
ecto-epithelium5.98e-1673
pre-chordal neural plate1.26e-1549
central nervous system5.97e-1573
brain1.38e-1447
future brain1.38e-1447
regional part of brain5.28e-1446
nervous system8.47e-1475
ectoderm-derived structure2.62e-1395
ectoderm2.62e-1395
presumptive ectoderm2.62e-1395
anterior neural tube1.08e-1240
regional part of forebrain4.26e-1239
forebrain4.26e-1239
future forebrain4.26e-1239
gray matter5.88e-1034
tube2.67e-08114
anatomical conduit2.74e-08122
brain grey matter6.33e-0829
regional part of telencephalon6.33e-0829
telencephalon6.33e-0829
occipital lobe6.95e-0710
visual cortex6.95e-0710
neocortex6.95e-0710
cerebral cortex8.52e-0721
cerebral hemisphere8.52e-0721
pallium8.52e-0721







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