FFCP PHASE1:Mm9::chr4:140924031..140924094,+: Difference between revisions
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|id=chr4:140924031..140924094,+ | |id=chr4:140924031..140924094,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.54e-15!23;CL:0000337!5.54e-15!23;CL:0000540!2.49e-10!33;CL:0000047!2.49e-10!33;CL:0000031!2.49e-10!33;CL:0000404!2.49e-10!33 | |ontology_enrichment_celltype=CL:0000117!5.54e-15!23;CL:0000337!5.54e-15!23;CL:0000540!2.49e-10!33;CL:0000047!2.49e-10!33;CL:0000031!2.49e-10!33;CL:0000404!2.49e-10!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-17,23;CL:0000337,2.39e-17,23;CL:0000540,1.42e-10,33;CL:0000047,1.42e-10,33;CL:0000031,1.42e-10,33;CL:0000404,1.42e-10,33;CL:0000393,3.17e-07,39;CL:0000211,3.17e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.30e-13!73;UBERON:0005743!3.30e-13!73;UBERON:0001049!3.44e-13!52;UBERON:0005068!3.44e-13!52;UBERON:0006241!3.44e-13!52;UBERON:0007135!3.44e-13!52;UBERON:0000073!2.62e-12!75;UBERON:0001016!2.62e-12!75;UBERON:0004121!6.08e-12!102;UBERON:0000924!6.08e-12!102;UBERON:0006601!6.08e-12!102;UBERON:0002020!1.17e-11!34;UBERON:0000955!1.49e-11!50;UBERON:0006238!1.49e-11!50;UBERON:0002616!2.70e-11!49;UBERON:0002346!2.92e-11!71;UBERON:0003075!2.92e-11!71;UBERON:0007284!2.92e-11!71;UBERON:0000033!3.71e-11!63;UBERON:0003080!3.01e-09!40;UBERON:0002780!8.88e-09!39;UBERON:0001890!8.88e-09!39;UBERON:0006240!8.88e-09!39;UBERON:0002791!1.52e-08!29;UBERON:0003528!1.52e-08!29;UBERON:0001893!1.52e-08!29;UBERON:0003056!7.01e-08!49;UBERON:0000468!1.87e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!3.30e-13!73;UBERON:0005743!3.30e-13!73;UBERON:0001049!3.44e-13!52;UBERON:0005068!3.44e-13!52;UBERON:0006241!3.44e-13!52;UBERON:0007135!3.44e-13!52;UBERON:0000073!2.62e-12!75;UBERON:0001016!2.62e-12!75;UBERON:0004121!6.08e-12!102;UBERON:0000924!6.08e-12!102;UBERON:0006601!6.08e-12!102;UBERON:0002020!1.17e-11!34;UBERON:0000955!1.49e-11!50;UBERON:0006238!1.49e-11!50;UBERON:0002616!2.70e-11!49;UBERON:0002346!2.92e-11!71;UBERON:0003075!2.92e-11!71;UBERON:0007284!2.92e-11!71;UBERON:0000033!3.71e-11!63;UBERON:0003080!3.01e-09!40;UBERON:0002780!8.88e-09!39;UBERON:0001890!8.88e-09!39;UBERON:0006240!8.88e-09!39;UBERON:0002791!1.52e-08!29;UBERON:0003528!1.52e-08!29;UBERON:0001893!1.52e-08!29;UBERON:0003056!7.01e-08!49;UBERON:0000468!1.87e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-14,54;UBERON:0001049,7.14e-13,52;UBERON:0005068,7.14e-13,52;UBERON:0006241,7.14e-13,52;UBERON:0007135,7.14e-13,52;UBERON:0001017,3.98e-12,73;UBERON:0002020,1.21e-11,34;UBERON:0001016,2.92e-11,75;UBERON:0002346,6.24e-10,64;UBERON:0003075,6.24e-10,64;UBERON:0007284,6.24e-10,64;UBERON:0010371,1.30e-09,73;UBERON:0004121,1.56e-09,95;UBERON:0000924,1.56e-09,95;UBERON:0006601,1.56e-09,95;UBERON:0000955,2.38e-09,47;UBERON:0006238,2.38e-09,47;UBERON:0002616,4.55e-09,46;UBERON:0003080,2.41e-08,40;UBERON:0003528,3.50e-08,29;UBERON:0002791,3.50e-08,29;UBERON:0001893,3.50e-08,29;UBERON:0002780,7.66e-08,39;UBERON:0001890,7.66e-08,39;UBERON:0006240,7.66e-08,39;UBERON:0002420,7.74e-07,8;UBERON:0007245,7.74e-07,8;UBERON:0010009,7.74e-07,8;UBERON:0010011,7.74e-07,8;UBERON:0000454,7.74e-07,8 | |||
|phase1_expression=1.76163731815273,1.04692622291808,0.454999239389536,0.90739263392049,2.00358291978539,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.159992422793407,0.68822784320151,1.14846392823004,0,1.29282739611533,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0,0.573066879877513,0,29.1335703637821,42.3192783417626,24.0855933332348,0,0.889294796111139,0,0,0,0.599200221036809,0,4.56234294157302,5.8052553482627,4.41682418837902,48.2750163642428,35.5598350932098,8.32937434661688,4.98396449294829,8.27296907949019,12.1127469099328,12.896421146604,12.1349161272432,27.6961204233407,34.8567922125181,24.4829284161677,15.9134309430787,10.1297269805702,10.3902808488231,35.6500588423138,33.8844600301865,29.4511124403975,0.302904773332736,0.0755715601067855,1.44932244350839,2.58127163094416,8.15965600449301,3.77792234146472,5.19821133958135,2.68816132258401,3.5111105032938,0.170430322578058,0,0,2.95771181531029,0,0,0,6.061749148314,6.84071636782766,4.54972000513305,4.22480354960522,0,2.52351636410202,0.693941307064543,1.21786191324856,0.461230994512117,0.753613202763113,0.940709657085638,4.14699751387929,0.247194967734374,0.86759614151947,0,0.808834249737046,0.220841518460394,0,0,4.9772735491963,2.30391377494801,0.510914110417183,0.11981512450592,0,0,7.33974133083631,3.66000482254901,27.0156857042658,1.04294592115366,2.30143911597297,10.8049783170971,4.38051410282946,2.64782346010822,0.622034853050465,1.26361379216837,0.210441855886474,0.390361328888111,0.689706313300419,0.720248519221397,0.90422890701429,2.24520447199382,1.5373646434182,1.68663104207512,0.517406741478031,0.431135985865684,0.756424320671277,0.351902248327898,0.657587197282725,0,0.696504333044333,3.2925141825271,0.796137067273973,0,0,0,0.828503090142008,0.469052119962192,0.540186184383045,1.18372367792605,0.196764231747404,0.771335564436891,0.465067889500816,0.804820204198858,0.116765342367169,0.658239399653922,0.492502392237286,0.729619285912702,0.146199987425332,0.219550115291051,0.536825675041487,0.630869845692382,10.2904612379284,0.330418782983798,1.32225283331772,0.853153002140936,0.464473343720877,0.902072229254653,1.61346819698674,1.77902435075896,0.380451252225118,1.89811624617805,1.4822905925161,1.00534083520108,1.59165177632921,0.58489226135736,1.79763881730844,1.08069024937347,0.398282546508734,0.948339504765408,1.37098215131675,3.38123207019241,2.64746726198909,1.93952487167626,2.80543279561274,1.58091342810643,1.03327103585722,1.72698600625512,1.85095745882701,0.889357881261447,0,0,0,0,0.241177159752417,0.50925170356284,0,0.324270453550071,1.92192989231657,1.43768206527355,3.34926852901653,4.36852742360385,5.55673531483646,4.4849353380478,1.92977408545347,0.739012760666419,0.947457058852424,1.62964976442026,2.37643120085263,1.87752198630802,1.50755631697634,1.42826184531608,0.780534591431195,0.945810864637146,0.664394068946325,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,0,0,1.47529281905711,0.827810238914197,12.36239542906,11.4867452860359,0,0,0.631016438832513,1.95219372148319,1.07711698866399,0.238968797952552,0.222798674082394,0.849229592366497,0,0.876767573733936,0.790575555893047,3.53453448063988,0.99358059645788,1.42452482933804,1.62886959353576,2.96946221350564,0,0.971122544619926,0.604647113929502,1.50884063804718,0.885905678642318,1.53717573971964,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.4229455216103,0.857348140126369,1.59606210278046,1.78368817602071,1.48094118541909,2.43571959291679,0,0,0.220528398054962,0.65954501176592,3.39075296061402,1.68876189798836,0.596861720015682,1.47726809770555,2.04036585640896,9.6421157045465,0,0.82554747185289,0,0,0,0,0.169978429993855,0,0,6.68269432610579,1.42351197111511,1.62655573701479,1.72808545314882,1.88179466413022,2.18362563746178,1.88810084938749,3.55409859618945,1.83229159388821,0.259229946583586,4.97071450469541,0,0.299033092087958,0.165458490457098,0.777804753376191,1.54991788173277,1.18269287843545,1.17357238645754,0.5208175393758,0.629156066554265,0,0,0,0.608175645870493,0.205421914329655,0,0.358053391334963,0.39736270956253,0.120195449519969,0,0.605798699688886,0.0762068066549998,0.100826185136841,0,0,0,4.53460767230423,0.443971906748129,0.358855426437903,0.167884616364078,0.386379188064381,0.187682475451182,0.915758121336325,9.21784030039983,0,5.0827665835536,4.60325236507177,3.43737308063638,4.81188910562325,1.37016503954128,0.755393897389701,2.70009000092722,3.60256962579376,0.906284817968409,3.62432218226274,0.31136204275253,0.399024873401031,1.02440163452481,1.70174701947806,4.40187641518763,6.61836630420051,6.44515510624684,4.94484137373346,3.85103051510178,6.31743029409494,6.84394109703647,4.90428487603798,4.68207537349412,5.95433917365284,7.06456268154043,8.57328644309533,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|phase1_expression=1.76163731815273,1.04692622291808,0.454999239389536,0.90739263392049,2.00358291978539,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.159992422793407,0.68822784320151,1.14846392823004,0,1.29282739611533,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0,0.573066879877513,0,29.1335703637821,42.3192783417626,24.0855933332348,0,0.889294796111139,0,0,0,0.599200221036809,0,4.56234294157302,5.8052553482627,4.41682418837902,48.2750163642428,35.5598350932098,8.32937434661688,4.98396449294829,8.27296907949019,12.1127469099328,12.896421146604,12.1349161272432,27.6961204233407,34.8567922125181,24.4829284161677,15.9134309430787,10.1297269805702,10.3902808488231,35.6500588423138,33.8844600301865,29.4511124403975,0.302904773332736,0.0755715601067855,1.44932244350839,2.58127163094416,8.15965600449301,3.77792234146472,5.19821133958135,2.68816132258401,3.5111105032938,0.170430322578058,0,0,2.95771181531029,0,0,0,6.061749148314,6.84071636782766,4.54972000513305,4.22480354960522,0,2.52351636410202,0.693941307064543,1.21786191324856,0.461230994512117,0.753613202763113,0.940709657085638,4.14699751387929,0.247194967734374,0.86759614151947,0,0.808834249737046,0.220841518460394,0,0,4.9772735491963,2.30391377494801,0.510914110417183,0.11981512450592,0,0,7.33974133083631,3.66000482254901,27.0156857042658,1.04294592115366,2.30143911597297,10.8049783170971,4.38051410282946,2.64782346010822,0.622034853050465,1.26361379216837,0.210441855886474,0.390361328888111,0.689706313300419,0.720248519221397,0.90422890701429,2.24520447199382,1.5373646434182,1.68663104207512,0.517406741478031,0.431135985865684,0.756424320671277,0.351902248327898,0.657587197282725,0,0.696504333044333,3.2925141825271,0.796137067273973,0,0,0,0.828503090142008,0.469052119962192,0.540186184383045,1.18372367792605,0.196764231747404,0.771335564436891,0.465067889500816,0.804820204198858,0.116765342367169,0.658239399653922,0.492502392237286,0.729619285912702,0.146199987425332,0.219550115291051,0.536825675041487,0.630869845692382,10.2904612379284,0.330418782983798,1.32225283331772,0.853153002140936,0.464473343720877,0.902072229254653,1.61346819698674,1.77902435075896,0.380451252225118,1.89811624617805,1.4822905925161,1.00534083520108,1.59165177632921,0.58489226135736,1.79763881730844,1.08069024937347,0.398282546508734,0.948339504765408,1.37098215131675,3.38123207019241,2.64746726198909,1.93952487167626,2.80543279561274,1.58091342810643,1.03327103585722,1.72698600625512,1.85095745882701,0.889357881261447,0,0,0,0,0.241177159752417,0.50925170356284,0,0.324270453550071,1.92192989231657,1.43768206527355,3.34926852901653,4.36852742360385,5.55673531483646,4.4849353380478,1.92977408545347,0.739012760666419,0.947457058852424,1.62964976442026,2.37643120085263,1.87752198630802,1.50755631697634,1.42826184531608,0.780534591431195,0.945810864637146,0.664394068946325,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,0,0,1.47529281905711,0.827810238914197,12.36239542906,11.4867452860359,0,0,0.631016438832513,1.95219372148319,1.07711698866399,0.238968797952552,0.222798674082394,0.849229592366497,0,0.876767573733936,0.790575555893047,3.53453448063988,0.99358059645788,1.42452482933804,1.62886959353576,2.96946221350564,0,0.971122544619926,0.604647113929502,1.50884063804718,0.885905678642318,1.53717573971964,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.4229455216103,0.857348140126369,1.59606210278046,1.78368817602071,1.48094118541909,2.43571959291679,0,0,0.220528398054962,0.65954501176592,3.39075296061402,1.68876189798836,0.596861720015682,1.47726809770555,2.04036585640896,9.6421157045465,0,0.82554747185289,0,0,0,0,0.169978429993855,0,0,6.68269432610579,1.42351197111511,1.62655573701479,1.72808545314882,1.88179466413022,2.18362563746178,1.88810084938749,3.55409859618945,1.83229159388821,0.259229946583586,4.97071450469541,0,0.299033092087958,0.165458490457098,0.777804753376191,1.54991788173277,1.18269287843545,1.17357238645754,0.5208175393758,0.629156066554265,0,0,0,0.608175645870493,0.205421914329655,0,0.358053391334963,0.39736270956253,0.120195449519969,0,0.605798699688886,0.0762068066549998,0.100826185136841,0,0,0,4.53460767230423,0.443971906748129,0.358855426437903,0.167884616364078,0.386379188064381,0.187682475451182,0.915758121336325,9.21784030039983,0,5.0827665835536,4.60325236507177,3.43737308063638,4.81188910562325,1.37016503954128,0.755393897389701,2.70009000092722,3.60256962579376,0.906284817968409,3.62432218226274,0.31136204275253,0.399024873401031,1.02440163452481,1.70174701947806,4.40187641518763,6.61836630420051,6.44515510624684,4.94484137373346,3.85103051510178,6.31743029409494,6.84394109703647,4.90428487603798,4.68207537349412,5.95433917365284,7.06456268154043,8.57328644309533,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| ||
|short_description=p1@Fam131c | |short_description=p1@Fam131c | ||
}} | }} |
Revision as of 12:44, 14 November 2012
Short description: | p1@Fam131c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam131c_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -40bp_to_ENSMUST00000006380, NM_001085513, uc008vod.1_5end |
EntrezGene: | Fam131c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.39e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-17 | 23 |
neuron | 1.42e-10 | 33 |
neuronal stem cell | 1.42e-10 | 33 |
neuroblast | 1.42e-10 | 33 |
electrically signaling cell | 1.42e-10 | 33 |
electrically responsive cell | 3.17e-07 | 39 |
electrically active cell | 3.17e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.49e-14 | 54 |
neural tube | 7.14e-13 | 52 |
neural rod | 7.14e-13 | 52 |
future spinal cord | 7.14e-13 | 52 |
neural keel | 7.14e-13 | 52 |
central nervous system | 3.98e-12 | 73 |
gray matter | 1.21e-11 | 34 |
nervous system | 2.92e-11 | 75 |
neurectoderm | 6.24e-10 | 64 |
neural plate | 6.24e-10 | 64 |
presumptive neural plate | 6.24e-10 | 64 |
ecto-epithelium | 1.30e-09 | 73 |
ectoderm-derived structure | 1.56e-09 | 95 |
ectoderm | 1.56e-09 | 95 |
presumptive ectoderm | 1.56e-09 | 95 |
brain | 2.38e-09 | 47 |
future brain | 2.38e-09 | 47 |
regional part of brain | 4.55e-09 | 46 |
anterior neural tube | 2.41e-08 | 40 |
brain grey matter | 3.50e-08 | 29 |
regional part of telencephalon | 3.50e-08 | 29 |
telencephalon | 3.50e-08 | 29 |
regional part of forebrain | 7.66e-08 | 39 |
forebrain | 7.66e-08 | 39 |
future forebrain | 7.66e-08 | 39 |
basal ganglion | 7.74e-07 | 8 |
nuclear complex of neuraxis | 7.74e-07 | 8 |
aggregate regional part of brain | 7.74e-07 | 8 |
collection of basal ganglia | 7.74e-07 | 8 |
cerebral subcortex | 7.74e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.