FFCP PHASE1:Mm9::chr11:58752353..58752425,-: Difference between revisions
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|id=chr11:58752353..58752425,- | |id=chr11:58752353..58752425,- | ||
|ontology_enrichment_celltype=CL:0000055!6.45e-22!50;CL:0000221!8.22e-22!44;CL:0000133!8.22e-22!44;CL:0002319!1.26e-21!43;CL:0000393!6.09e-18!39;CL:0000211!6.09e-18!39;CL:0000540!7.45e-18!33;CL:0000047!7.45e-18!33;CL:0000031!7.45e-18!33;CL:0000404!7.45e-18!33;CL:0000117!2.10e-15!23;CL:0000337!2.10e-15!23;CL:0002321!2.75e-09!70;CL:0000220!2.75e-09!70;CL:0000723!4.83e-07!91;CL:0000048!4.83e-07!91 | |ontology_enrichment_celltype=CL:0000055!6.45e-22!50;CL:0000221!8.22e-22!44;CL:0000133!8.22e-22!44;CL:0002319!1.26e-21!43;CL:0000393!6.09e-18!39;CL:0000211!6.09e-18!39;CL:0000540!7.45e-18!33;CL:0000047!7.45e-18!33;CL:0000031!7.45e-18!33;CL:0000404!7.45e-18!33;CL:0000117!2.10e-15!23;CL:0000337!2.10e-15!23;CL:0002321!2.75e-09!70;CL:0000220!2.75e-09!70;CL:0000723!4.83e-07!91;CL:0000048!4.83e-07!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.22e-22,44;CL:0000133,8.22e-22,44;CL:0002319,1.26e-21,43;CL:0000393,6.09e-18,39;CL:0000211,6.09e-18,39;CL:0000540,7.45e-18,33;CL:0000047,7.45e-18,33;CL:0000031,7.45e-18,33;CL:0000404,7.45e-18,33;CL:0000117,2.10e-15,23;CL:0000337,2.10e-15,23;CL:0002321,2.75e-09,70;CL:0000723,4.83e-07,91;CL:0000048,4.83e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.03e-33!75;UBERON:0001016!1.03e-33!75;UBERON:0001017!1.80e-33!73;UBERON:0005743!1.80e-33!73;UBERON:0001049!3.13e-23!52;UBERON:0005068!3.13e-23!52;UBERON:0006241!3.13e-23!52;UBERON:0007135!3.13e-23!52;UBERON:0004121!4.43e-23!102;UBERON:0000924!4.43e-23!102;UBERON:0006601!4.43e-23!102;UBERON:0002346!9.74e-22!71;UBERON:0003075!9.74e-22!71;UBERON:0007284!9.74e-22!71;UBERON:0000955!1.40e-21!50;UBERON:0006238!1.40e-21!50;UBERON:0002616!3.37e-21!49;UBERON:0000033!1.77e-20!63;UBERON:0002020!8.36e-20!34;UBERON:0003056!7.58e-17!49;UBERON:0003080!2.03e-16!40;UBERON:0002791!2.51e-16!29;UBERON:0003528!2.51e-16!29;UBERON:0001893!2.51e-16!29;UBERON:0002780!5.64e-16!39;UBERON:0001890!5.64e-16!39;UBERON:0006240!5.64e-16!39;UBERON:0007811!2.62e-13!86;UBERON:0000956!1.66e-11!21;UBERON:0001869!1.66e-11!21;UBERON:0000203!1.66e-11!21;UBERON:0000153!4.82e-11!94;UBERON:0002619!1.20e-09!17;UBERON:0003076!1.61e-07!12;UBERON:0003057!1.61e-07!12;UBERON:0000025!1.88e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!1.03e-33!75;UBERON:0001016!1.03e-33!75;UBERON:0001017!1.80e-33!73;UBERON:0005743!1.80e-33!73;UBERON:0001049!3.13e-23!52;UBERON:0005068!3.13e-23!52;UBERON:0006241!3.13e-23!52;UBERON:0007135!3.13e-23!52;UBERON:0004121!4.43e-23!102;UBERON:0000924!4.43e-23!102;UBERON:0006601!4.43e-23!102;UBERON:0002346!9.74e-22!71;UBERON:0003075!9.74e-22!71;UBERON:0007284!9.74e-22!71;UBERON:0000955!1.40e-21!50;UBERON:0006238!1.40e-21!50;UBERON:0002616!3.37e-21!49;UBERON:0000033!1.77e-20!63;UBERON:0002020!8.36e-20!34;UBERON:0003056!7.58e-17!49;UBERON:0003080!2.03e-16!40;UBERON:0002791!2.51e-16!29;UBERON:0003528!2.51e-16!29;UBERON:0001893!2.51e-16!29;UBERON:0002780!5.64e-16!39;UBERON:0001890!5.64e-16!39;UBERON:0006240!5.64e-16!39;UBERON:0007811!2.62e-13!86;UBERON:0000956!1.66e-11!21;UBERON:0001869!1.66e-11!21;UBERON:0000203!1.66e-11!21;UBERON:0000153!4.82e-11!94;UBERON:0002619!1.20e-09!17;UBERON:0003076!1.61e-07!12;UBERON:0003057!1.61e-07!12;UBERON:0000025!1.88e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.03e-33,75;UBERON:0001017,1.80e-33,73;UBERON:0004121,3.48e-25,95;UBERON:0000924,3.48e-25,95;UBERON:0006601,3.48e-25,95;UBERON:0000073,8.38e-25,54;UBERON:0002346,1.12e-24,64;UBERON:0003075,1.12e-24,64;UBERON:0007284,1.12e-24,64;UBERON:0001049,3.13e-23,52;UBERON:0005068,3.13e-23,52;UBERON:0006241,3.13e-23,52;UBERON:0007135,3.13e-23,52;UBERON:0002020,8.36e-20,34;UBERON:0000955,1.14e-19,47;UBERON:0006238,1.14e-19,47;UBERON:0002616,2.68e-19,46;UBERON:0010371,3.88e-19,73;UBERON:0010314,7.64e-18,92;UBERON:0003056,7.58e-17,49;UBERON:0003080,2.03e-16,40;UBERON:0003528,2.51e-16,29;UBERON:0002791,2.51e-16,29;UBERON:0001893,2.51e-16,29;UBERON:0002780,5.64e-16,39;UBERON:0001890,5.64e-16,39;UBERON:0006240,5.64e-16,39;UBERON:0000956,1.66e-11,21;UBERON:0001869,1.66e-11,21;UBERON:0000203,1.66e-11,21;UBERON:0002619,1.20e-09,17;UBERON:0003076,1.61e-07,12;UBERON:0003057,1.61e-07,12;UBERON:0000025,1.88e-07,114 | |||
|phase1_expression=156.945870162698,62.4665979674456,62.3348957963664,62.0051633179002,85.6531698208254,72.8596040097602,61.4401244766233,116.34011442086,20.27357598984,25.5130333690973,54.9609678003871,77.2194499074856,98.4404197104433,102.89381364716,160.892014956965,150.84407420542,283.322560641899,102.05201049339,86.7934364724326,114.585205985468,144.998809707574,102.170388785711,73.3971407480408,49.1176737975758,52.0759068022476,76.3728512272977,68.921919385452,52.1440383099851,66.1281499708181,83.674003080297,70.5103023883869,123.830981324628,105.791143464546,158.481681015439,72.5017565575699,84.6134344874726,77.3801860234379,38.0863783970586,53.1308034276184,32.9819958703493,50.5879079706672,40.2996836125483,44.6669524788661,163.917657004202,162.101713020004,132.887848565057,343.469800168789,188.591760269086,250.002875951829,185.097263918718,123.46802387357,181.128231099864,80.200085695598,97.9238891715315,90.0731381701803,95.7005102053723,103.438571817891,121.698613777476,450.356441873465,487.200691909542,470.302901401585,198.224051260442,169.855306057228,239.373324796852,236.339060653507,238.72131862189,245.372490514573,354.249277506473,236.619695287946,256.511282830212,249.866054085442,477.322794938756,388.949500615791,261.762837922357,215.939846204087,275.765635983006,300.616355128331,268.015722640809,285.093725723588,434.697204358719,372.537684749012,340.677344344121,401.185969564984,331.467177308659,284.968732103751,354.438188324822,315.922759693209,405.605194115854,118.511492566433,120.83892461075,80.2924633703647,117.87807114645,83.6364740460533,86.3525106620507,83.1713814333016,67.6520599516977,100.558204814334,92.2028045147292,106.512261887176,102.821816182509,140.561732937127,65.4465034813021,91.7298862943925,99.5493384414664,64.0813481393194,68.6605235437517,81.3894356473801,84.6102548718234,34.1798006414267,71.1037846120511,136.706437491715,95.6021601900123,99.8565103118733,92.5437012993103,69.2597485029301,94.2499434972566,43.7535092889842,59.5749350510036,73.4226758118396,95.4424414689714,109.537393156355,107.642306196019,44.7340226923493,171.276766251755,231.229164322054,79.9580582802891,101.962670954538,64.1895922162946,98.9877068899174,200.120294244843,204.045268857107,234.471021042605,186.33967124612,248.555424525081,196.567490153344,222.270530402828,107.644207589784,83.9747051618128,60.9061847825156,71.5502310014011,120.231289297538,192.198159306383,131.805479017516,136.387860141322,124.302683949476,121.451806830038,162.759895560249,107.620602227431,90.107421045928,89.4471759193785,101.699749766762,109.597866213787,89.2531670014169,78.0084853009653,72.641094152004,116.236011822,63.9014000455044,50.9548856087136,79.5657798307659,79.1220451085617,86.5401161330245,94.1724581441108,78.3625074787046,89.5277254450687,89.7834597004541,88.5954329499054,100.602525524857,91.1937323887594,103.014466045839,90.2921052435024,97.3636402645727,125.878189173211,116.800661334839,124.409350190865,186.947764273509,177.201742517128,47.2498859666831,58.4435752326433,107.070701768687,99.8617688999886,74.0987902602037,63.7319937809762,64.7120107588573,71.1443841660971,79.720882339478,73.9498306710809,78.6679203544844,81.1742405927895,75.8410298893377,65.6138168317582,56.4120310172952,64.7209138076693,120.439117105207,106.365365239658,95.8015753221184,102.843920561884,92.5153363789575,96.1562090696267,85.0531424321261,93.5848338190678,102.206171824735,118.214483037085,88.6393354990575,75.5808328893906,93.7586406689978,82.2995331328565,89.0555932895528,95.5061552619571,96.5031978251581,68.1839845758421,72.3123111416658,78.5245641717913,191.211714681382,95.2680826031369,82.377945702244,79.5623465533402,77.8584774685099,82.4978421531358,81.4761568634727,137.00229071006,94.682651312817,102.016796550888,77.4477819352057,68.5100592937026,68.0804812933999,91.127413549592,72.5121662888479,81.9419351700467,91.3675824407401,102.250708382621,98.0850696998287,98.5060088940094,70.871903451458,56.5661911171458,57.0446556702082,58.4985902166033,207.591912854215,211.567094298927,143.115207313838,137.091713471975,167.534864510032,144.07189664546,158.55162073134,154.373843477349,135.684392516178,149.747484787292,166.782009090056,206.332635685386,173.531334518524,171.585582969245,59.0470754466397,135.329858787114,109.948697563664,80.3404498876248,153.984360474357,124.546466347505,114.278304532676,106.939080221594,134.362361260752,107.294866632431,98.9780362834287,107.605983925342,107.305710893801,149.485386503641,172.886518062998,162.954158332135,53.7894577090985,144.408997413111,150.573507923126,139.104735735503,90.2661789239173,118.615263705377,116.007059524495,138.531551847143,41.5368923272767,39.1889331098067,76.7438825231267,63.3163211295283,64.2628418249704,64.0523262737015,89.5292580023523,87.9795222633528,76.076498360391,175.412335701942,106.965171379456,95.1443461310456,84.6338990079582,157.099293141912,132.593400889394,145.045361812935,90.0885678967433,91.248346915025,98.812981270163,78.2829906772393,97.5896540197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| ||
|short_description=p1@Rnf187 | |short_description=p1@Rnf187 | ||
}} | }} |
Revision as of 10:36, 14 November 2012
Short description: | p1@Rnf187 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf187_5end |
Coexpression cluster: | MCL_coexpression_mm9:1294 |
Association with transcript: | 0bp_to_ENSMUST00000094151, NM_022423, uc007jcq.1_5end |
EntrezGene: | Rnf187 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.22e-22 | 44 |
neurectodermal cell | 8.22e-22 | 44 |
neural cell | 1.26e-21 | 43 |
electrically responsive cell | 6.09e-18 | 39 |
electrically active cell | 6.09e-18 | 39 |
neuron | 7.45e-18 | 33 |
neuronal stem cell | 7.45e-18 | 33 |
neuroblast | 7.45e-18 | 33 |
electrically signaling cell | 7.45e-18 | 33 |
CNS neuron (sensu Vertebrata) | 2.10e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.10e-15 | 23 |
embryonic cell | 2.75e-09 | 70 |
somatic stem cell | 4.83e-07 | 91 |
multi fate stem cell | 4.83e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.03e-33 | 75 |
central nervous system | 1.80e-33 | 73 |
ectoderm-derived structure | 3.48e-25 | 95 |
ectoderm | 3.48e-25 | 95 |
presumptive ectoderm | 3.48e-25 | 95 |
regional part of nervous system | 8.38e-25 | 54 |
neurectoderm | 1.12e-24 | 64 |
neural plate | 1.12e-24 | 64 |
presumptive neural plate | 1.12e-24 | 64 |
neural tube | 3.13e-23 | 52 |
neural rod | 3.13e-23 | 52 |
future spinal cord | 3.13e-23 | 52 |
neural keel | 3.13e-23 | 52 |
gray matter | 8.36e-20 | 34 |
brain | 1.14e-19 | 47 |
future brain | 1.14e-19 | 47 |
regional part of brain | 2.68e-19 | 46 |
ecto-epithelium | 3.88e-19 | 73 |
structure with developmental contribution from neural crest | 7.64e-18 | 92 |
pre-chordal neural plate | 7.58e-17 | 49 |
anterior neural tube | 2.03e-16 | 40 |
brain grey matter | 2.51e-16 | 29 |
regional part of telencephalon | 2.51e-16 | 29 |
telencephalon | 2.51e-16 | 29 |
regional part of forebrain | 5.64e-16 | 39 |
forebrain | 5.64e-16 | 39 |
future forebrain | 5.64e-16 | 39 |
cerebral cortex | 1.66e-11 | 21 |
cerebral hemisphere | 1.66e-11 | 21 |
pallium | 1.66e-11 | 21 |
regional part of cerebral cortex | 1.20e-09 | 17 |
posterior neural tube | 1.61e-07 | 12 |
chordal neural plate | 1.61e-07 | 12 |
tube | 1.88e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.