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FFCP PHASE1:Mm9::chr3:40549254..40549267,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18415|HGNC=|MCL_coexpression_id=7|UniProt=E0CY23|association_with_transcript=-36bp_to_ENSMUST00000159819_5end|description=CAGE_peak_3_at_Hspa4l_5end|id=chr3:40549254..40549267,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!3.19e-15!86;UBERON:0000033!2.73e-14!63;UBERON:0003056!2.08e-12!49;UBERON:0000955!4.85e-12!50;UBERON:0006238!4.85e-12!50;UBERON:0002616!8.33e-12!49;UBERON:0000153!3.43e-11!94;UBERON:0000483!9.70e-11!181;UBERON:0004121!9.78e-11!102;UBERON:0000924!9.78e-11!102;UBERON:0006601!9.78e-11!102;UBERON:0000073!1.50e-10!75;UBERON:0001016!1.50e-10!75;UBERON:0000119!2.60e-10!183;UBERON:0001017!2.95e-10!73;UBERON:0005743!2.95e-10!73;UBERON:0001049!3.31e-10!52;UBERON:0005068!3.31e-10!52;UBERON:0006241!3.31e-10!52;UBERON:0007135!3.31e-10!52;UBERON:0002346!5.31e-10!71;UBERON:0003075!5.31e-10!71;UBERON:0007284!5.31e-10!71;UBERON:0003080!2.45e-09!40;UBERON:0002780!7.39e-09!39;UBERON:0001890!7.39e-09!39;UBERON:0006240!7.39e-09!39;UBERON:0000025!3.63e-08!114;UBERON:0000477!2.65e-07!154;UBERON:0004111!4.36e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.35e-12,95;UBERON:0000924,1.35e-12,95;UBERON:0006601,1.35e-12,95;UBERON:0002346,1.57e-12,64;UBERON:0003075,1.57e-12,64;UBERON:0007284,1.57e-12,64;UBERON:0000483,1.91e-12,174;UBERON:0003056,2.28e-12,49;UBERON:0000119,4.58e-12,176;UBERON:0010371,8.23e-12,73;UBERON:0010314,3.38e-11,92;UBERON:0000073,3.79e-11,54;UBERON:0000955,1.11e-10,47;UBERON:0006238,1.11e-10,47;UBERON:0001016,1.19e-10,75;UBERON:0002616,1.89e-10,46;UBERON:0001017,2.36e-10,73;UBERON:0001049,2.71e-10,52;UBERON:0005068,2.71e-10,52;UBERON:0006241,2.71e-10,52;UBERON:0007135,2.71e-10,52;UBERON:0003080,2.82e-09,40;UBERON:0002780,8.53e-09,39;UBERON:0001890,8.53e-09,39;UBERON:0006240,8.53e-09,39;UBERON:0000025,3.35e-08,114;UBERON:0004111,3.42e-07,122|phase1_expression=4.00372117761985,2.09385244583617,3.18499467572675,5.44435580352294,4.50806156951712,3.3575854382378,2.80335168714631,6.32704284863724,88.274528789095,83.7951004232737,7.53359060192222,3.43020283679947,7.19043065711064,7.60557501045277,0.666219523631325,1.41732687172878,2.09868563438444,0.788655413395594,0.548457734422955,0.84877930359606,8.1641558545027,0.992909512008853,1.04479915655574,0.95995453676044,0.22940928106717,2.8711598205751,0.430761996159075,1.72376986148711,0.190023419456374,0.504060259519861,0.221730510655305,3.17515336729816,1.23012957516914,0,2.88851619751275,2.1610503896604,1.42918549383658,9.20769587621197,0.7813353445238,6.80580867165938,32.9409633297368,12.9778642142105,15.5363312969969,0.503587271902309,1.31790010585369,0.183546752161682,0,12.209408757305,5.93152693383074,14.5822424305713,3.3596741190087,8.62515386189829,2.85230430298152,7.97898356212479,8.73843877770406,5.40244815675489,1.14613375975503,1.54701627683233,0.606949382578793,1.05798195854407,1.26766280701236,2.37191172448392,0,0.449949858640699,0.988866362566974,1.4209602298922,2.09720077362883,2.68952813725088,3.52544681848824,1.35005938331691,3.15487442027073,1.14260393761521,1.54607978666129,2.20483438586917,0.958454710182364,2.75765635983006,11.0115880999389,6.00130489000382,11.5204899942183,1.97829431595291,2.28719109006024,2.08365348222704,12.0048689570594,11.2552522006336,10.8486755921535,3.53554302568401,2.13557521198654,2.60959224155421,2.65041676666144,3.70300644523249,1.44932244350839,2.58127163094416,3.39985666853875,4.85732872474035,4.54843492213368,7.16843019355737,2.94933282276679,0.511290967734173,0,0,1.26759077799012,0,0,0,12.7729714196616,11.9079136773296,13.6491600153991,2.96878087269556,2.84831672011889,6.38301197978747,1.21439728736295,0.608930956624282,0.922461989024234,0.301445281105245,1.29347577849275,1.88499886994513,3.21353458054686,3.7595832799177,5.30766331169925,1.45590164952668,1.54589062922275,2.90925151881133,3.72783522436244,2.92780797011547,3.77004072264219,1.27728527604296,1.31796636956512,1.79970819298022,2.1601938602421,9.58660092190865,5.94750783664214,1.25654352112864,5.9100268865374,6.13717097592793,9.97382613885888,6.48965052271031,0.81471491080253,1.61729061793121,0.758168275301024,5.05060454127538,3.90361328888111,5.51765050640335,6.84236093260327,3.31550599238573,5.03470093719826,5.12454881139399,4.77878795254617,9.31332134660456,0,0.945530400839096,1.05570674498369,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,4.91549231119264,3.08817488537658,1.98914449576915,2.07125772535502,2.11073453982987,2.88099298337624,3.31442629819294,2.55793501271625,3.5481435964097,3.0229412817553,2.95100741539581,3.73649095574942,2.13927804887525,2.79084688934462,2.02672023864639,2.63159977365598,3.95190207523891,3.22095405024892,9.67333763394985,1.64647379806855,1.32167513193519,1.32225283331772,0.213288250535234,1.16118335930219,0.644337306610467,1.00841762311671,0.889512175379481,1.90225626112559,2.84717436926707,0.988193728344065,0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|EntrezGene=18415
|HGNC=
|MCL_coexpression_id=7
|UniProt=E0CY23
|association_with_transcript=-36bp_to_ENSMUST00000159819_5end
|description=CAGE_peak_3_at_Hspa4l_5end
|id=chr3:40549254..40549267,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!3.19e-15!86;UBERON:0000033!2.73e-14!63;UBERON:0003056!2.08e-12!49;UBERON:0000955!4.85e-12!50;UBERON:0006238!4.85e-12!50;UBERON:0002616!8.33e-12!49;UBERON:0000153!3.43e-11!94;UBERON:0000483!9.70e-11!181;UBERON:0004121!9.78e-11!102;UBERON:0000924!9.78e-11!102;UBERON:0006601!9.78e-11!102;UBERON:0000073!1.50e-10!75;UBERON:0001016!1.50e-10!75;UBERON:0000119!2.60e-10!183;UBERON:0001017!2.95e-10!73;UBERON:0005743!2.95e-10!73;UBERON:0001049!3.31e-10!52;UBERON:0005068!3.31e-10!52;UBERON:0006241!3.31e-10!52;UBERON:0007135!3.31e-10!52;UBERON:0002346!5.31e-10!71;UBERON:0003075!5.31e-10!71;UBERON:0007284!5.31e-10!71;UBERON:0003080!2.45e-09!40;UBERON:0002780!7.39e-09!39;UBERON:0001890!7.39e-09!39;UBERON:0006240!7.39e-09!39;UBERON:0000025!3.63e-08!114;UBERON:0000477!2.65e-07!154;UBERON:0004111!4.36e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.35e-12,95;UBERON:0000924,1.35e-12,95;UBERON:0006601,1.35e-12,95;UBERON:0002346,1.57e-12,64;UBERON:0003075,1.57e-12,64;UBERON:0007284,1.57e-12,64;UBERON:0000483,1.91e-12,174;UBERON:0003056,2.28e-12,49;UBERON:0000119,4.58e-12,176;UBERON:0010371,8.23e-12,73;UBERON:0010314,3.38e-11,92;UBERON:0000073,3.79e-11,54;UBERON:0000955,1.11e-10,47;UBERON:0006238,1.11e-10,47;UBERON:0001016,1.19e-10,75;UBERON:0002616,1.89e-10,46;UBERON:0001017,2.36e-10,73;UBERON:0001049,2.71e-10,52;UBERON:0005068,2.71e-10,52;UBERON:0006241,2.71e-10,52;UBERON:0007135,2.71e-10,52;UBERON:0003080,2.82e-09,40;UBERON:0002780,8.53e-09,39;UBERON:0001890,8.53e-09,39;UBERON:0006240,8.53e-09,39;UBERON:0000025,3.35e-08,114;UBERON:0004111,3.42e-07,122
|phase1_expression=4.00372117761985,2.09385244583617,3.18499467572675,5.44435580352294,4.50806156951712,3.3575854382378,2.80335168714631,6.32704284863724,88.274528789095,83.7951004232737,7.53359060192222,3.43020283679947,7.19043065711064,7.60557501045277,0.666219523631325,1.41732687172878,2.09868563438444,0.788655413395594,0.548457734422955,0.84877930359606,8.1641558545027,0.992909512008853,1.04479915655574,0.95995453676044,0.22940928106717,2.8711598205751,0.430761996159075,1.72376986148711,0.190023419456374,0.504060259519861,0.221730510655305,3.17515336729816,1.23012957516914,0,2.88851619751275,2.1610503896604,1.42918549383658,9.20769587621197,0.7813353445238,6.80580867165938,32.9409633297368,12.9778642142105,15.5363312969969,0.503587271902309,1.31790010585369,0.183546752161682,0,12.209408757305,5.93152693383074,14.5822424305713,3.3596741190087,8.62515386189829,2.85230430298152,7.97898356212479,8.73843877770406,5.40244815675489,1.14613375975503,1.54701627683233,0.606949382578793,1.05798195854407,1.26766280701236,2.37191172448392,0,0.449949858640699,0.988866362566974,1.4209602298922,2.09720077362883,2.68952813725088,3.52544681848824,1.35005938331691,3.15487442027073,1.14260393761521,1.54607978666129,2.20483438586917,0.958454710182364,2.75765635983006,11.0115880999389,6.00130489000382,11.5204899942183,1.97829431595291,2.28719109006024,2.08365348222704,12.0048689570594,11.2552522006336,10.8486755921535,3.53554302568401,2.13557521198654,2.60959224155421,2.65041676666144,3.70300644523249,1.44932244350839,2.58127163094416,3.39985666853875,4.85732872474035,4.54843492213368,7.16843019355737,2.94933282276679,0.511290967734173,0,0,1.26759077799012,0,0,0,12.7729714196616,11.9079136773296,13.6491600153991,2.96878087269556,2.84831672011889,6.38301197978747,1.21439728736295,0.608930956624282,0.922461989024234,0.301445281105245,1.29347577849275,1.88499886994513,3.21353458054686,3.7595832799177,5.30766331169925,1.45590164952668,1.54589062922275,2.90925151881133,3.72783522436244,2.92780797011547,3.77004072264219,1.27728527604296,1.31796636956512,1.79970819298022,2.1601938602421,9.58660092190865,5.94750783664214,1.25654352112864,5.9100268865374,6.13717097592793,9.97382613885888,6.48965052271031,0.81471491080253,1.61729061793121,0.758168275301024,5.05060454127538,3.90361328888111,5.51765050640335,6.84236093260327,3.31550599238573,5.03470093719826,5.12454881139399,4.77878795254617,9.31332134660456,0,0.945530400839096,1.05570674498369,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,4.91549231119264,3.08817488537658,1.98914449576915,2.07125772535502,2.11073453982987,2.88099298337624,3.31442629819294,2.55793501271625,3.5481435964097,3.0229412817553,2.95100741539581,3.73649095574942,2.13927804887525,2.79084688934462,2.02672023864639,2.63159977365598,3.95190207523891,3.22095405024892,9.67333763394985,1.64647379806855,1.32167513193519,1.32225283331772,0.213288250535234,1.16118335930219,0.644337306610467,1.00841762311671,0.889512175379481,1.90225626112559,2.84717436926707,0.988193728344065,0.754005626400808,0.795825888164603,1.55971269695296,0.898819408654221,0.864552199498777,1.1948476395262,0.758671603812327,0.342745537829186,1.1270773567308,1.22190796707189,0,0.49095073923223,1.70738650235495,2.80459281161244,2.511979645462,4.31890073726302,5.92905254174298,1.50160595144485,1.57247196090562,1.34917267430912,1.62288097110802,2.17059443777175,1.2731292589071,1.72617682470486,0.810676133875177,1.09824565275233,2.87536413054709,1.48856379067401,1.24815069245824,1.51547326768267,3.22915344339442,3.37710464954357,6.09685527549795,1.13694847062291,1.30371981153621,1.69745085775188,1.87752198630802,3.51763140627813,3.57065461329021,3.12213836572478,3.31033802623001,1.10732344824387,1.59454768657487,3.11340297959902,2.93564469172023,3.18227928879325,4.52373851817817,1.63171705145613,0.983528546038072,0.827810238914197,12.2018448390722,10.5490517932983,2.62295912602681,1.51482556322624,1.26203287766503,1.95219372148319,1.72338718186239,2.15071918157297,2.45078541490634,2.54768877709949,3.23848561339915,1.75353514746787,2.37172666767914,3.53453448063988,2.83880170416537,0.890328018336276,0.977321756121456,2.47455184458803,0,0.728341908464944,0.906970670894253,0.565815239267694,0.295301892880773,0,0.775284879504663,0.727067458955011,1.06949213515416,0.632073515871632,0,2.06271086496374,14.2984634416591,6.66226047915848,2.71653235943784,5.5727629108214,9.3990323830405,4.63758925765383,6.2528627828806,2.13125464380219,1.40803024838226,0.63549621259146,1.10264199027481,5.60613260001032,1.77610869365496,2.41251699712623,3.46179797609096,5.25250879184196,0.582961673259701,15.0194494628513,1.36696704638282,0.206386867963223,1.29636169158798,0.941842285023455,1.77702496037333,2.51655990527175,2.37969801991397,3.35883485576779,3.73139929271944,0.954670618015114,0.474503990371703,0.203319467126849,0.756037385752609,0.627264888043406,1.31017538247707,1.07891477107857,1.23980183588004,2.09404753587224,0.777689839750757,0.621339313086926,34.3852692597356,0.897099276263873,1.15820943319968,2.72231663681667,1.93739735216597,0.844780627453891,0.704143431874524,1.5624526181274,13.421996086491,15.4613837328644,26.7867905819815,3.16011120628178,3.24360344464263,3.08132871494482,1.94881234466693,3.04345382634718,3.57626438606277,1.9231271923195,2.36303243479324,2.82706059854813,2.51482461961499,1.20991422164209,3.41102582589133,2.40529604100824,4.44132228289962,2.72076460338254,1.10992976687032,0.269141569828427,0.335769232728157,1.35232715822533,2.81523713176773,1.09890974560359,2.78678892802786,0,2.82375921308533,3.68260189205742,5.72895513439397,2.23409137046794,8.90607275701835,6.7985450765073,5.40018000185445,9.00642406448441,9.9691329976525,8.28416498802912,2.90604573235695,8.37952234142165,1.70733605754134,1.45864030240976,1.88651846365184,1.47074806760011,2.22246727801615,3.29656091582231,2.56735367673452,3.28506375292937,2.28131369901216,1.13175804831646,1.31098110457835,1.53660365771686,1.32101578597911,0.952587382566147,2.0859178670074,2.12200142510076,2.06042950401653,1.91358596174717,1.02860775715625,1.24233064311536,1.66905332963125,1.74415699958794,1.88218760830661,1.77690676572521,2.19513567447327,2.10455769150274,1.35804113845862,1.12228454331548,3.55905054372522,2.06859412988683,2.45538625901814,2.78886314134739,1.54325288784913,1.49886346762768,2.8071793013449,1.93383948643468,2.29545998482612,0.882365676478062,1.15933917810211
|short_description=p3@Hspa4l
}}

Revision as of 02:12, 14 September 2013

Short description:p3@Hspa4l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Hspa4l_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: -36bp_to_ENSMUST00000159819_5end
EntrezGene:Hspa4l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Hspa4l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E788.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F283.80
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.21
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F93.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A49.59
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C65.03
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E33.74
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A310.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G814.30
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B99.40
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.73
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G534.39
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D913.42
testis, neonate N20.CNhs11110.839-18H315.46
testis, neonate N30.CNhs11130.1391-42E226.79
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G24.44
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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