FFCP PHASE1:Mm9::chr18:75857160..75857176,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269037|HGNC=|MCL_coexpression_id=13|UniProt=E9Q1U6|association_with_transcript=31bp_to_ENSMUST00000065082_5end|description=CAGE_peak_4_at_Ctif_5end|id=chr18:75857160..75857176,-|ontology_enrichment_celltype=CL:0000117!1.29e-10!23;CL:0000337!1.29e-10!23;CL:0000393!7.61e-10!39;CL:0000211!7.61e-10!39;CL:0000055!2.55e-09!50;CL:0000221!4.22e-09!44;CL:0000133!4.22e-09!44;CL:0002319!9.39e-09!43;CL:0000540!1.12e-08!33;CL:0000047!1.12e-08!33;CL:0000031!1.12e-08!33;CL:0000404!1.12e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.38e-13,23;CL:0000337,7.38e-13,23;CL:0000393,3.62e-09,39;CL:0000211,3.62e-09,39;CL:0000540,3.76e-08,33;CL:0000047,3.76e-08,33;CL:0000031,3.76e-08,33;CL:0000404,3.76e-08,33;CL:0000221,7.48e-08,44;CL:0000133,7.48e-08,44;CL:0002319,1.91e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.68e-19!73;UBERON:0005743!2.68e-19!73;UBERON:0004121!9.44e-19!102;UBERON:0000924!9.44e-19!102;UBERON:0006601!9.44e-19!102;UBERON:0000073!1.19e-18!75;UBERON:0001016!1.19e-18!75;UBERON:0001049!4.65e-16!52;UBERON:0005068!4.65e-16!52;UBERON:0006241!4.65e-16!52;UBERON:0007135!4.65e-16!52;UBERON:0000955!1.76e-15!50;UBERON:0006238!1.76e-15!50;UBERON:0002020!1.91e-15!34;UBERON:0000033!4.88e-15!63;UBERON:0002616!5.66e-15!49;UBERON:0002346!3.19e-14!71;UBERON:0003075!3.19e-14!71;UBERON:0007284!3.19e-14!71;UBERON:0002791!6.17e-13!29;UBERON:0003528!6.17e-13!29;UBERON:0001893!6.17e-13!29;UBERON:0003080!4.70e-12!40;UBERON:0002780!1.98e-11!39;UBERON:0001890!1.98e-11!39;UBERON:0006240!1.98e-11!39;UBERON:0003056!2.61e-11!49;UBERON:0000956!9.55e-09!21;UBERON:0001869!9.55e-09!21;UBERON:0000203!9.55e-09!21;UBERON:0004111!5.13e-08!122;UBERON:0002619!7.75e-08!17;UBERON:0000468!6.25e-07!333;UBERON:0000025!8.57e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.13e-20,54;UBERON:0002020,1.64e-19,34;UBERON:0001017,8.44e-19,73;UBERON:0001049,6.83e-18,52;UBERON:0005068,6.83e-18,52;UBERON:0006241,6.83e-18,52;UBERON:0007135,6.83e-18,52;UBERON:0001016,8.90e-18,75;UBERON:0010371,1.30e-16,73;UBERON:0004121,1.82e-16,95;UBERON:0000924,1.82e-16,95;UBERON:0006601,1.82e-16,95;UBERON:0003528,4.15e-16,29;UBERON:0002791,4.15e-16,29;UBERON:0001893,4.15e-16,29;UBERON:0000955,7.38e-15,47;UBERON:0006238,7.38e-15,47;UBERON:0002346,1.10e-14,64;UBERON:0003075,1.10e-14,64;UBERON:0007284,1.10e-14,64;UBERON:0002616,3.16e-14,46;UBERON:0003080,1.90e-13,40;UBERON:0002780,1.21e-12,39;UBERON:0001890,1.21e-12,39;UBERON:0006240,1.21e-12,39;UBERON:0003056,3.70e-11,49;UBERON:0000956,1.81e-10,21;UBERON:0001869,1.81e-10,21;UBERON:0000203,1.81e-10,21;UBERON:0010314,4.63e-10,92;UBERON:0002619,1.07e-09,17;UBERON:0002021,1.69e-08,10;UBERON:0000411,1.69e-08,10;UBERON:0001950,1.69e-08,10;UBERON:0002420,4.48e-07,8;UBERON:0007245,4.48e-07,8;UBERON:0010009,4.48e-07,8;UBERON:0010011,4.48e-07,8;UBERON:0000454,4.48e-07,8|phase1_expression=1.76163731815273,0,0.909998478779072,0,0,0,0.467225281191051,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.01376931219515,1.28482726513177,2.34717403304412,0.436050312760893,0.439372365468944,0.388859798148567,0.839918529752175,2.87505128729943,0,0,0,1.54355661621568,1.43266719969378,1.54701627683233,3.23706337375356,2.11596391708813,0.633831403506179,0.338844532069132,0,0,0,0,2.69640099466564,1.15265491596466,1.76272340924412,1.4850653216486,0.630974884054146,3.99911378165325,2.42955395046775,2.44981598429908,2.1086003624012,1.83843757322004,4.40463523997555,3.06449611404451,2.76491759861238,1.71452174049252,4.02545631850602,2.6045668527838,3.07101298901519,2.25105044012672,2.44477196442896,2.35702868378934,1.70846016958924,2.60959224155421,0.454357159999104,0.377857800533928,0.869593466105033,0,0,0,0,0.448026887097336,0,1.70430322578058,1.03914401841148,2.47337702157238,1.83096445709685,1.28326477414318,7.64415719119937,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,0.693941307064543,0.913396434936424,0.230615497256059,0.60289056221049,1.41106448562846,0.125666591329675,0.494389935468748,2.02439099687876,0,0.647067399789637,0.662524555381181,0.969750506270444,0,0.878342391034642,1.04723353406728,0,0,0,0,4.94309110035915,3.20250421973039,3.39266750704734,3.65031072403781,5.62574006126727,3.74018480207208,3.89379031362618,1.01839363850316,0.746441823660558,0,0.631325567659422,0.260240885925407,0.459804208866946,1.44049703844279,1.20563854268572,1.42876648217788,0.2562274405697,0.749613796477831,0.776110112217047,0,0.756424320671277,0.703804496655795,0.657587197282725,1.11218899690239,0.696504333044333,1.64625709126355,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0,0.536546802799238,0.467061369468678,0.658239399653922,1.14917224855367,0.891756905004413,0.730999937126662,1.09775057645525,0.939444931322602,5.67782861123144,2.6755199218614,0,0,0,0.696710015581316,0.77320476793256,0.2016835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| ||
|EntrezGene=269037 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=E9Q1U6 | |||
|association_with_transcript=31bp_to_ENSMUST00000065082_5end | |||
|description=CAGE_peak_4_at_Ctif_5end | |||
|id=chr18:75857160..75857176,- | |||
|ontology_enrichment_celltype=CL:0000117!1.29e-10!23;CL:0000337!1.29e-10!23;CL:0000393!7.61e-10!39;CL:0000211!7.61e-10!39;CL:0000055!2.55e-09!50;CL:0000221!4.22e-09!44;CL:0000133!4.22e-09!44;CL:0002319!9.39e-09!43;CL:0000540!1.12e-08!33;CL:0000047!1.12e-08!33;CL:0000031!1.12e-08!33;CL:0000404!1.12e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.38e-13,23;CL:0000337,7.38e-13,23;CL:0000393,3.62e-09,39;CL:0000211,3.62e-09,39;CL:0000540,3.76e-08,33;CL:0000047,3.76e-08,33;CL:0000031,3.76e-08,33;CL:0000404,3.76e-08,33;CL:0000221,7.48e-08,44;CL:0000133,7.48e-08,44;CL:0002319,1.91e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.68e-19!73;UBERON:0005743!2.68e-19!73;UBERON:0004121!9.44e-19!102;UBERON:0000924!9.44e-19!102;UBERON:0006601!9.44e-19!102;UBERON:0000073!1.19e-18!75;UBERON:0001016!1.19e-18!75;UBERON:0001049!4.65e-16!52;UBERON:0005068!4.65e-16!52;UBERON:0006241!4.65e-16!52;UBERON:0007135!4.65e-16!52;UBERON:0000955!1.76e-15!50;UBERON:0006238!1.76e-15!50;UBERON:0002020!1.91e-15!34;UBERON:0000033!4.88e-15!63;UBERON:0002616!5.66e-15!49;UBERON:0002346!3.19e-14!71;UBERON:0003075!3.19e-14!71;UBERON:0007284!3.19e-14!71;UBERON:0002791!6.17e-13!29;UBERON:0003528!6.17e-13!29;UBERON:0001893!6.17e-13!29;UBERON:0003080!4.70e-12!40;UBERON:0002780!1.98e-11!39;UBERON:0001890!1.98e-11!39;UBERON:0006240!1.98e-11!39;UBERON:0003056!2.61e-11!49;UBERON:0000956!9.55e-09!21;UBERON:0001869!9.55e-09!21;UBERON:0000203!9.55e-09!21;UBERON:0004111!5.13e-08!122;UBERON:0002619!7.75e-08!17;UBERON:0000468!6.25e-07!333;UBERON:0000025!8.57e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.13e-20,54;UBERON:0002020,1.64e-19,34;UBERON:0001017,8.44e-19,73;UBERON:0001049,6.83e-18,52;UBERON:0005068,6.83e-18,52;UBERON:0006241,6.83e-18,52;UBERON:0007135,6.83e-18,52;UBERON:0001016,8.90e-18,75;UBERON:0010371,1.30e-16,73;UBERON:0004121,1.82e-16,95;UBERON:0000924,1.82e-16,95;UBERON:0006601,1.82e-16,95;UBERON:0003528,4.15e-16,29;UBERON:0002791,4.15e-16,29;UBERON:0001893,4.15e-16,29;UBERON:0000955,7.38e-15,47;UBERON:0006238,7.38e-15,47;UBERON:0002346,1.10e-14,64;UBERON:0003075,1.10e-14,64;UBERON:0007284,1.10e-14,64;UBERON:0002616,3.16e-14,46;UBERON:0003080,1.90e-13,40;UBERON:0002780,1.21e-12,39;UBERON:0001890,1.21e-12,39;UBERON:0006240,1.21e-12,39;UBERON:0003056,3.70e-11,49;UBERON:0000956,1.81e-10,21;UBERON:0001869,1.81e-10,21;UBERON:0000203,1.81e-10,21;UBERON:0010314,4.63e-10,92;UBERON:0002619,1.07e-09,17;UBERON:0002021,1.69e-08,10;UBERON:0000411,1.69e-08,10;UBERON:0001950,1.69e-08,10;UBERON:0002420,4.48e-07,8;UBERON:0007245,4.48e-07,8;UBERON:0010009,4.48e-07,8;UBERON:0010011,4.48e-07,8;UBERON:0000454,4.48e-07,8 | |||
|phase1_expression=1.76163731815273,0,0.909998478779072,0,0,0,0.467225281191051,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.01376931219515,1.28482726513177,2.34717403304412,0.436050312760893,0.439372365468944,0.388859798148567,0.839918529752175,2.87505128729943,0,0,0,1.54355661621568,1.43266719969378,1.54701627683233,3.23706337375356,2.11596391708813,0.633831403506179,0.338844532069132,0,0,0,0,2.69640099466564,1.15265491596466,1.76272340924412,1.4850653216486,0.630974884054146,3.99911378165325,2.42955395046775,2.44981598429908,2.1086003624012,1.83843757322004,4.40463523997555,3.06449611404451,2.76491759861238,1.71452174049252,4.02545631850602,2.6045668527838,3.07101298901519,2.25105044012672,2.44477196442896,2.35702868378934,1.70846016958924,2.60959224155421,0.454357159999104,0.377857800533928,0.869593466105033,0,0,0,0,0.448026887097336,0,1.70430322578058,1.03914401841148,2.47337702157238,1.83096445709685,1.28326477414318,7.64415719119937,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,0.693941307064543,0.913396434936424,0.230615497256059,0.60289056221049,1.41106448562846,0.125666591329675,0.494389935468748,2.02439099687876,0,0.647067399789637,0.662524555381181,0.969750506270444,0,0.878342391034642,1.04723353406728,0,0,0,0,4.94309110035915,3.20250421973039,3.39266750704734,3.65031072403781,5.62574006126727,3.74018480207208,3.89379031362618,1.01839363850316,0.746441823660558,0,0.631325567659422,0.260240885925407,0.459804208866946,1.44049703844279,1.20563854268572,1.42876648217788,0.2562274405697,0.749613796477831,0.776110112217047,0,0.756424320671277,0.703804496655795,0.657587197282725,1.11218899690239,0.696504333044333,1.64625709126355,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0,0.536546802799238,0.467061369468678,0.658239399653922,1.14917224855367,0.891756905004413,0.730999937126662,1.09775057645525,0.939444931322602,5.67782861123144,2.6755199218614,0,0,0,0.696710015581316,0.77320476793256,0.201683524623343,0,1.14135375667535,0,0.658795818896044,0.502670417600539,0.795825888164603,0.58489226135736,0,0.432276099749388,0.398282546508734,0.189667900953082,0.342745537829186,0,0.814605311381257,0.969762435838129,0.561086559122548,0.885311519739602,0.442830443938806,0.156998727841375,0.493588655687202,0.296452627087149,0.333690211432188,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0,0,0.482443521363367,0,0.189491411770485,0.651859905768103,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,1.17080188714679,0.630540576424764,1.55025282754142,0.797273843287435,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0,0.827810238914197,2.88991061978026,2.10981035865966,0.327869890753351,0.252470927204373,0.631016438832513,0.780877488593277,1.07711698866399,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.790575555893047,2.57057053137446,0.283880170416537,1.42452482933804,1.79175655288934,2.96946221350564,0,0.242780636154981,1.51161778482376,0,0,0.922305443831782,0.775284879504663,1.09060118843252,1.06949213515416,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.428674070063185,0.177340233642274,1.07021290561242,0.493647061806363,0.913394847343798,2.3467170806371,1.0591603543191,0.882113592219848,3.13283880588812,0.807322133479528,1.26657142349127,2.74556391207214,3.61109979439135,0.582961673259701,1.66882771809459,0,0.412773735926445,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0,0,0,1.01659733563424,0.86404272657441,0.627264888043406,1.31017538247707,1.07891477107857,1.98368293740806,0.523511883968059,1.29614973291793,0.621339313086926,0,1.64468200648377,1.15820943319968,2.72231663681667,2.58319646955462,2.19642963138012,5.51579021635044,2.3436789271911,1.04859344425711,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0.100966449948148,0,0.201652370273681,0,0,0,0.453460767230423,0.221985953374065,0.538283139656854,1.00730769818447,2.89784391048286,0.93841237725591,1.83151624267265,1.50057865355346,1.00314420807073,2.82375921308533,1.84130094602871,2.86447756719698,3.26521046453006,4.11049511862385,1.5107877947794,3.37511250115903,2.2516060161211,2.71885445390523,7.24864436452548,0.62272408550506,1.99512436700516,1.02440163452481,1.21553358534147,0.838452650511929,1.10306105070008,0.666740183404846,0.824140228955577,1.28367683836726,1.26348605881899,1.01391719956096,0.377252682772152,1.40462261204824,0.960377286073039,1.26358031702349,0.476293691283074,1.97003354106254,1.73618298417335,1.64834360321323,1.47198920134397,1.02860775715625,1.06485483695602,0.476872379894642,0.581385666529314,1.31753132581463,1.09998990259179,1.09756783723664,0.263069711437843,0.814824683075171,0.561142271657738,0.830445126869219,0.985044823755635,0.818462086339379,1.549368411859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| |||
|short_description=p4@Ctif | |||
}} |
Revision as of 16:45, 13 September 2013
Short description: | p4@Ctif |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ctif_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 31bp_to_ENSMUST00000065082_5end |
EntrezGene: | Ctif |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.38e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.38e-13 | 23 |
electrically responsive cell | 3.62e-09 | 39 |
electrically active cell | 3.62e-09 | 39 |
neuron | 3.76e-08 | 33 |
neuronal stem cell | 3.76e-08 | 33 |
neuroblast | 3.76e-08 | 33 |
electrically signaling cell | 3.76e-08 | 33 |
ectodermal cell | 7.48e-08 | 44 |
neurectodermal cell | 7.48e-08 | 44 |
neural cell | 1.91e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.