FFCP PHASE1:Mm9::chr11:69419455..69419473,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11932|HGNC=|MCL_coexpression_id=303|UniProt=P14231,Q3UR55|association_with_transcript=0bp_to_NM_013415,uc007jqo.1_5end|description=CAGE_peak_1_at_Atp1b2_5end|id=chr11:69419455..69419473,-|ontology_enrichment_celltype=CL:0000221!2.81e-10!44;CL:0000133!2.81e-10!44;CL:0002319!3.71e-10!43;CL:0000117!1.16e-07!23;CL:0000337!1.16e-07!23;CL:0000540!6.26e-07!33;CL:0000047!6.26e-07!33;CL:0000031!6.26e-07!33;CL:0000404!6.26e-07!33;CL:0002453!8.99e-07!8|ontology_enrichment_celltype_v019_2=CL:0000221,3.23e-10,44;CL:0000133,3.23e-10,44;CL:0002319,4.27e-10,43;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23;CL:0000540,6.09e-07,33;CL:0000047,6.09e-07,33;CL:0000031,6.09e-07,33;CL:0000404,6.09e-07,33;CL:0002453,8.76e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.55e-25!73;UBERON:0005743!2.55e-25!73;UBERON:0000073!9.63e-24!75;UBERON:0001016!9.63e-24!75;UBERON:0004121!8.23e-23!102;UBERON:0000924!8.23e-23!102;UBERON:0006601!8.23e-23!102;UBERON:0002346!2.92e-21!71;UBERON:0003075!2.92e-21!71;UBERON:0007284!2.92e-21!71;UBERON:0001049!8.77e-20!52;UBERON:0005068!8.77e-20!52;UBERON:0006241!8.77e-20!52;UBERON:0007135!8.77e-20!52;UBERON:0000033!1.28e-19!63;UBERON:0000955!8.76e-19!50;UBERON:0006238!8.76e-19!50;UBERON:0002616!3.23e-18!49;UBERON:0003056!3.23e-14!49;UBERON:0002020!6.06e-13!34;UBERON:0003080!1.61e-12!40;UBERON:0002780!5.97e-12!39;UBERON:0001890!5.97e-12!39;UBERON:0006240!5.97e-12!39;UBERON:0002791!2.46e-10!29;UBERON:0003528!2.46e-10!29;UBERON:0001893!2.46e-10!29;UBERON:0000025!1.41e-08!114;UBERON:0003076!1.64e-08!12;UBERON:0003057!1.64e-08!12;UBERON:0000479!5.67e-08!349;UBERON:0004111!5.93e-08!122;UBERON:0002619!1.74e-07!17;UBERON:0000956!3.78e-07!21;UBERON:0001869!3.78e-07!21;UBERON:0000203!3.78e-07!21;UBERON:0000468!5.47e-07!333;UBERON:0007811!6.70e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.25e-25,73;UBERON:0001016,1.09e-23,75;UBERON:0004121,4.86e-22,95;UBERON:0000924,4.86e-22,95;UBERON:0006601,4.86e-22,95;UBERON:0000073,3.88e-21,54;UBERON:0002346,5.31e-21,64;UBERON:0003075,5.31e-21,64;UBERON:0007284,5.31e-21,64;UBERON:0001049,7.99e-20,52;UBERON:0005068,7.99e-20,52;UBERON:0006241,7.99e-20,52;UBERON:0007135,7.99e-20,52;UBERON:0010314,1.05e-19,92;UBERON:0010371,1.92e-18,73;UBERON:0000955,7.34e-17,47;UBERON:0006238,7.34e-17,47;UBERON:0002616,2.63e-16,46;UBERON:0003056,3.03e-14,49;UBERON:0002020,5.71e-13,34;UBERON:0003080,1.52e-12,40;UBERON:0002780,5.66e-12,39;UBERON:0001890,5.66e-12,39;UBERON:0006240,5.66e-12,39;UBERON:0003528,2.35e-10,29;UBERON:0002791,2.35e-10,29;UBERON:0001893,2.35e-10,29;UBERON:0003076,1.58e-08,12;UBERON:0003057,1.58e-08,12;UBERON:0000025,1.93e-08,114;UBERON:0000479,3.33e-08,349;UBERON:0004111,8.00e-08,122;UBERON:0002619,1.69e-07,17;UBERON:0000956,3.67e-07,21;UBERON:0001869,3.67e-07,21;UBERON:0000203,3.67e-07,21|phase1_expression=43.2401887182944,1.39590163055744,0.454999239389536,1.20985684522732,2.50447864973174,0.839396359559449,1.40167584357315,0.903863264091034,3.09735188733667,4.68129052643987,0,0,0,0.961624426608971,212.857137800208,100.832683160133,127.320261819323,2.05050407482854,1.50825876966313,7.21462408056651,127.649978516756,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0.86152399231815,0.646413698057667,0,0,0,29.8464416526027,30.1381745916439,47.5445043046316,2.88851619751275,0,7.14592746918292,4.18531630736908,0,0.523523743973798,1.17646297606203,0,0,0.377690453926732,0.912392380975631,1.28482726513177,1846.44357266137,1325.59295079311,1186.96444531435,1953.82605579747,709.871144062213,2057.09919606274,0.167782606057736,0,2.01656279485478,2.05807548828758,15.7593391966316,6.18806510732931,83.3543818741543,126.428844046016,139.442908771359,52.8597470027846,157.405178911672,0,10.8775299882367,0,2158.91839639562,3184.78553281037,26.3371615263533,28.0812351729917,23.135745748652,1035.77046944819,937.586956339599,26.3355218312151,22.1403038052126,57.9107835564313,1093.45069832393,1050.73910510301,1199.82063126452,75.8346154448615,80.9665645881325,79.1788323246275,1323.04823226754,798.560143634954,899.981679405412,618.425400909229,601.52035137621,139.426785477325,0.832988126665025,10.3533037346296,25.218210517046,2.58127163094416,1.3599426674155,3.77792234146472,1.29955283489534,1.34408066129201,121.624867834097,0.170430322578058,0,0,55.3514639722354,0,0,0,0,0,0,27.4041311325744,4.40194402200192,63.0879091025505,33.3091827390981,38.0581847890177,44.7394064676754,38.735718622024,56.9129342536811,52.7799683584637,4.20231445148436,36.5836373007376,77.8457285715889,145.104864402826,215.762163535804,123.643189549482,13.0474232852686,1150.04297066136,1032.36281788352,4.08731288333746,0.359445373517761,2.39961092397363,0.254140454146129,1031.75792422042,492.270648632842,75.8952286761701,441.33994896819,373.600283159613,842.164944599897,605.159911242736,36.5603316222635,54.863474039051,7.83440551144392,287.67401699681,13.9228873970093,23.9098188610812,38.3532336485394,69.6256258401004,115.0497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| ||
|EntrezGene=11932 | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|UniProt=P14231,Q3UR55 | |||
|association_with_transcript=0bp_to_NM_013415,uc007jqo.1_5end | |||
|description=CAGE_peak_1_at_Atp1b2_5end | |||
|id=chr11:69419455..69419473,- | |||
|ontology_enrichment_celltype=CL:0000221!2.81e-10!44;CL:0000133!2.81e-10!44;CL:0002319!3.71e-10!43;CL:0000117!1.16e-07!23;CL:0000337!1.16e-07!23;CL:0000540!6.26e-07!33;CL:0000047!6.26e-07!33;CL:0000031!6.26e-07!33;CL:0000404!6.26e-07!33;CL:0002453!8.99e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.23e-10,44;CL:0000133,3.23e-10,44;CL:0002319,4.27e-10,43;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23;CL:0000540,6.09e-07,33;CL:0000047,6.09e-07,33;CL:0000031,6.09e-07,33;CL:0000404,6.09e-07,33;CL:0002453,8.76e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.55e-25!73;UBERON:0005743!2.55e-25!73;UBERON:0000073!9.63e-24!75;UBERON:0001016!9.63e-24!75;UBERON:0004121!8.23e-23!102;UBERON:0000924!8.23e-23!102;UBERON:0006601!8.23e-23!102;UBERON:0002346!2.92e-21!71;UBERON:0003075!2.92e-21!71;UBERON:0007284!2.92e-21!71;UBERON:0001049!8.77e-20!52;UBERON:0005068!8.77e-20!52;UBERON:0006241!8.77e-20!52;UBERON:0007135!8.77e-20!52;UBERON:0000033!1.28e-19!63;UBERON:0000955!8.76e-19!50;UBERON:0006238!8.76e-19!50;UBERON:0002616!3.23e-18!49;UBERON:0003056!3.23e-14!49;UBERON:0002020!6.06e-13!34;UBERON:0003080!1.61e-12!40;UBERON:0002780!5.97e-12!39;UBERON:0001890!5.97e-12!39;UBERON:0006240!5.97e-12!39;UBERON:0002791!2.46e-10!29;UBERON:0003528!2.46e-10!29;UBERON:0001893!2.46e-10!29;UBERON:0000025!1.41e-08!114;UBERON:0003076!1.64e-08!12;UBERON:0003057!1.64e-08!12;UBERON:0000479!5.67e-08!349;UBERON:0004111!5.93e-08!122;UBERON:0002619!1.74e-07!17;UBERON:0000956!3.78e-07!21;UBERON:0001869!3.78e-07!21;UBERON:0000203!3.78e-07!21;UBERON:0000468!5.47e-07!333;UBERON:0007811!6.70e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.25e-25,73;UBERON:0001016,1.09e-23,75;UBERON:0004121,4.86e-22,95;UBERON:0000924,4.86e-22,95;UBERON:0006601,4.86e-22,95;UBERON:0000073,3.88e-21,54;UBERON:0002346,5.31e-21,64;UBERON:0003075,5.31e-21,64;UBERON:0007284,5.31e-21,64;UBERON:0001049,7.99e-20,52;UBERON:0005068,7.99e-20,52;UBERON:0006241,7.99e-20,52;UBERON:0007135,7.99e-20,52;UBERON:0010314,1.05e-19,92;UBERON:0010371,1.92e-18,73;UBERON:0000955,7.34e-17,47;UBERON:0006238,7.34e-17,47;UBERON:0002616,2.63e-16,46;UBERON:0003056,3.03e-14,49;UBERON:0002020,5.71e-13,34;UBERON:0003080,1.52e-12,40;UBERON:0002780,5.66e-12,39;UBERON:0001890,5.66e-12,39;UBERON:0006240,5.66e-12,39;UBERON:0003528,2.35e-10,29;UBERON:0002791,2.35e-10,29;UBERON:0001893,2.35e-10,29;UBERON:0003076,1.58e-08,12;UBERON:0003057,1.58e-08,12;UBERON:0000025,1.93e-08,114;UBERON:0000479,3.33e-08,349;UBERON:0004111,8.00e-08,122;UBERON:0002619,1.69e-07,17;UBERON:0000956,3.67e-07,21;UBERON:0001869,3.67e-07,21;UBERON:0000203,3.67e-07,21 | |||
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| |||
|short_description=p1@Atp1b2 | |||
}} |
Revision as of 20:37, 12 September 2013
Short description: | p1@Atp1b2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atp1b2_5end |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | 0bp_to_NM_013415, uc007jqo.1_5end |
EntrezGene: | Atp1b2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.23e-10 | 44 |
neurectodermal cell | 3.23e-10 | 44 |
neural cell | 4.27e-10 | 43 |
CNS neuron (sensu Vertebrata) | 1.12e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-07 | 23 |
neuron | 6.09e-07 | 33 |
neuronal stem cell | 6.09e-07 | 33 |
neuroblast | 6.09e-07 | 33 |
electrically signaling cell | 6.09e-07 | 33 |
oligodendrocyte precursor cell | 8.76e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.