FFCP PHASE1:Mm9::chr10:128258801..128258829,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66118|HGNC=|MCL_coexpression_id=123|UniProt=Q9D1J3,B2RXM7,B7ZWI2|association_with_transcript=0bp_to_ENSMUST00000105230,NM_025364,uc007hoq.2,uc007hor.2,uc007hos.2,uc011xqk.1_5end|description=CAGE_peak_2_at_Sarnp_5end|id=chr10:128258801..128258829,+|ontology_enrichment_celltype=CL:0000791!6.45e-07!9;CL:0000789!6.45e-07!9;CL:0002420!6.45e-07!9;CL:0002419!6.45e-07!9;CL:0000790!6.45e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,3.16e-15,9;CL:0000789,3.16e-15,9;CL:0002420,3.16e-15,9;CL:0002419,3.16e-15,9;CL:0000790,3.16e-15,9;CL:0000988,5.56e-14,32;CL:0002032,5.56e-14,32;CL:0000037,5.56e-14,32;CL:0000837,5.56e-14,32;CL:0000838,8.80e-14,12;CL:0000624,1.30e-13,8;CL:0002031,1.96e-13,25;CL:0000542,1.52e-12,13;CL:0000051,1.52e-12,13;CL:0000084,4.18e-12,11;CL:0000827,4.18e-12,11;CL:0000893,2.03e-10,6;CL:0002489,2.03e-10,6;CL:0000898,2.03e-10,6;CL:0000809,2.03e-10,6;CL:0000810,2.03e-10,6;CL:0000895,2.03e-10,6;CL:0000808,2.03e-10,6;CL:0000894,2.03e-10,6;CL:0000806,2.03e-10,6;CL:0000807,2.03e-10,6;CL:0000805,2.03e-10,6;CL:0002425,2.03e-10,6;CL:0002436,2.03e-10,6;CL:0002427,2.03e-10,6;CL:0002428,2.03e-10,6;CL:0002429,2.03e-10,6;CL:0002433,2.03e-10,6;CL:0002431,2.03e-10,6;CL:0002432,2.03e-10,6;CL:0000738,4.59e-09,17;CL:0002087,4.59e-09,17;CL:0002320,2.38e-08,46;CL:0000134,2.38e-08,46;CL:0000553,8.43e-08,6;CL:0000556,8.43e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.88e-12!29;UBERON:0003408!2.73e-11!24;UBERON:0002193!4.23e-11!48;UBERON:0002370!5.42e-11!23;UBERON:0000974!5.42e-11!23;UBERON:0004807!5.42e-11!23;UBERON:0005058!5.42e-11!23;UBERON:0003351!5.42e-11!23;UBERON:0009113!5.42e-11!23;UBERON:0003295!5.42e-11!23;UBERON:0009722!5.42e-11!23;UBERON:0005562!5.42e-11!23;UBERON:0007690!5.42e-11!23;UBERON:0006562!8.17e-11!24;UBERON:0001557!8.17e-11!24;UBERON:0001042!8.17e-11!24;UBERON:0008814!8.17e-11!24;UBERON:0009145!8.17e-11!24;UBERON:0002390!9.72e-11!45;UBERON:0003061!9.72e-11!45;UBERON:0000072!2.43e-08!27;UBERON:0001004!2.24e-07!42;UBERON:0000065!4.31e-07!41;UBERON:0002405!4.68e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.72e-30,45;UBERON:0003061,1.72e-30,45;UBERON:0002193,2.28e-30,48;UBERON:0002405,2.28e-30,48;UBERON:0004177,2.57e-29,29;UBERON:0005057,2.57e-29,29;UBERON:0002370,2.66e-29,23;UBERON:0000974,2.66e-29,23;UBERON:0004807,2.66e-29,23;UBERON:0005058,2.66e-29,23;UBERON:0003351,2.66e-29,23;UBERON:0009113,2.66e-29,23;UBERON:0003295,2.66e-29,23;UBERON:0009722,2.66e-29,23;UBERON:0005562,2.66e-29,23;UBERON:0007690,2.66e-29,23;UBERON:0006562,7.70e-28,24;UBERON:0003408,7.70e-28,24;UBERON:0001557,7.70e-28,24;UBERON:0001042,7.70e-28,24;UBERON:0008814,7.70e-28,24;UBERON:0009145,7.70e-28,24;UBERON:0000072,4.14e-24,27;UBERON:0000077,3.55e-23,35;UBERON:0007811,1.13e-16,36;UBERON:0000065,5.74e-14,41;UBERON:0001004,1.66e-13,42;UBERON:0000926,2.81e-13,120;UBERON:0004120,2.81e-13,120;UBERON:0006603,2.81e-13,120;UBERON:0000153,4.58e-13,43;UBERON:0003081,6.66e-13,87;UBERON:0000490,2.26e-10,66;UBERON:0003929,4.39e-10,55;UBERON:0002368,8.54e-09,60;UBERON:0002384,2.38e-08,46;UBERON:0000949,5.50e-08,72;UBERON:0002530,1.03e-07,65;UBERON:0001041,1.74e-07,80;UBERON:0005911,5.72e-07,69|phase1_expression=0.160148847104794,0,0,0,0,0,0.700837921786577,8.39301602370246,4.22366166455,2.57470978954193,2.56826952338257,1.91453181588807,7.36163138704185,9.52882386367072,1.99865857089398,3.03712901084739,0,13.0916798623669,12.2031845909108,6.36584477697045,3.31668831589172,0.496454756004426,0,0,0.91763712426868,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,2.51118978442145,1.5626706890476,2.09409497589519,2.35292595212406,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,11.0736519998106,5.80289713609076,7.73015738027667,0,0.286533439938757,0,0.404632921719196,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.7127581957859,8.02707439306232,0.593768556259299,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,0,0.508280908292259,0,0,0.376963056338593,0,0,0,0.162241263067758,0.101839363850316,1.24406970610093,0,0,0.520481771850815,0,0.540186389416048,0.60281927134286,0.612328492361951,0.512454881139399,0.562210347358373,0,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,1.40442637462647,0.772043721344145,1.13665399758237,0,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.268412837520744,0,0.102904612379284,0,0,0.426576501070468,0.928946687441754,0.12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| ||
|EntrezGene=66118 | |||
|HGNC= | |||
|MCL_coexpression_id=123 | |||
|UniProt=Q9D1J3,B2RXM7,B7ZWI2 | |||
|association_with_transcript=0bp_to_ENSMUST00000105230,NM_025364,uc007hoq.2,uc007hor.2,uc007hos.2,uc011xqk.1_5end | |||
|description=CAGE_peak_2_at_Sarnp_5end | |||
|id=chr10:128258801..128258829,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.45e-07!9;CL:0000789!6.45e-07!9;CL:0002420!6.45e-07!9;CL:0002419!6.45e-07!9;CL:0000790!6.45e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.16e-15,9;CL:0000789,3.16e-15,9;CL:0002420,3.16e-15,9;CL:0002419,3.16e-15,9;CL:0000790,3.16e-15,9;CL:0000988,5.56e-14,32;CL:0002032,5.56e-14,32;CL:0000037,5.56e-14,32;CL:0000837,5.56e-14,32;CL:0000838,8.80e-14,12;CL:0000624,1.30e-13,8;CL:0002031,1.96e-13,25;CL:0000542,1.52e-12,13;CL:0000051,1.52e-12,13;CL:0000084,4.18e-12,11;CL:0000827,4.18e-12,11;CL:0000893,2.03e-10,6;CL:0002489,2.03e-10,6;CL:0000898,2.03e-10,6;CL:0000809,2.03e-10,6;CL:0000810,2.03e-10,6;CL:0000895,2.03e-10,6;CL:0000808,2.03e-10,6;CL:0000894,2.03e-10,6;CL:0000806,2.03e-10,6;CL:0000807,2.03e-10,6;CL:0000805,2.03e-10,6;CL:0002425,2.03e-10,6;CL:0002436,2.03e-10,6;CL:0002427,2.03e-10,6;CL:0002428,2.03e-10,6;CL:0002429,2.03e-10,6;CL:0002433,2.03e-10,6;CL:0002431,2.03e-10,6;CL:0002432,2.03e-10,6;CL:0000738,4.59e-09,17;CL:0002087,4.59e-09,17;CL:0002320,2.38e-08,46;CL:0000134,2.38e-08,46;CL:0000553,8.43e-08,6;CL:0000556,8.43e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.88e-12!29;UBERON:0003408!2.73e-11!24;UBERON:0002193!4.23e-11!48;UBERON:0002370!5.42e-11!23;UBERON:0000974!5.42e-11!23;UBERON:0004807!5.42e-11!23;UBERON:0005058!5.42e-11!23;UBERON:0003351!5.42e-11!23;UBERON:0009113!5.42e-11!23;UBERON:0003295!5.42e-11!23;UBERON:0009722!5.42e-11!23;UBERON:0005562!5.42e-11!23;UBERON:0007690!5.42e-11!23;UBERON:0006562!8.17e-11!24;UBERON:0001557!8.17e-11!24;UBERON:0001042!8.17e-11!24;UBERON:0008814!8.17e-11!24;UBERON:0009145!8.17e-11!24;UBERON:0002390!9.72e-11!45;UBERON:0003061!9.72e-11!45;UBERON:0000072!2.43e-08!27;UBERON:0001004!2.24e-07!42;UBERON:0000065!4.31e-07!41;UBERON:0002405!4.68e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.72e-30,45;UBERON:0003061,1.72e-30,45;UBERON:0002193,2.28e-30,48;UBERON:0002405,2.28e-30,48;UBERON:0004177,2.57e-29,29;UBERON:0005057,2.57e-29,29;UBERON:0002370,2.66e-29,23;UBERON:0000974,2.66e-29,23;UBERON:0004807,2.66e-29,23;UBERON:0005058,2.66e-29,23;UBERON:0003351,2.66e-29,23;UBERON:0009113,2.66e-29,23;UBERON:0003295,2.66e-29,23;UBERON:0009722,2.66e-29,23;UBERON:0005562,2.66e-29,23;UBERON:0007690,2.66e-29,23;UBERON:0006562,7.70e-28,24;UBERON:0003408,7.70e-28,24;UBERON:0001557,7.70e-28,24;UBERON:0001042,7.70e-28,24;UBERON:0008814,7.70e-28,24;UBERON:0009145,7.70e-28,24;UBERON:0000072,4.14e-24,27;UBERON:0000077,3.55e-23,35;UBERON:0007811,1.13e-16,36;UBERON:0000065,5.74e-14,41;UBERON:0001004,1.66e-13,42;UBERON:0000926,2.81e-13,120;UBERON:0004120,2.81e-13,120;UBERON:0006603,2.81e-13,120;UBERON:0000153,4.58e-13,43;UBERON:0003081,6.66e-13,87;UBERON:0000490,2.26e-10,66;UBERON:0003929,4.39e-10,55;UBERON:0002368,8.54e-09,60;UBERON:0002384,2.38e-08,46;UBERON:0000949,5.50e-08,72;UBERON:0002530,1.03e-07,65;UBERON:0001041,1.74e-07,80;UBERON:0005911,5.72e-07,69 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.700837921786577,8.39301602370246,4.22366166455,2.57470978954193,2.56826952338257,1.91453181588807,7.36163138704185,9.52882386367072,1.99865857089398,3.03712901084739,0,13.0916798623669,12.2031845909108,6.36584477697045,3.31668831589172,0.496454756004426,0,0,0.91763712426868,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,2.51118978442145,1.5626706890476,2.09409497589519,2.35292595212406,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,11.0736519998106,5.80289713609076,7.73015738027667,0,0.286533439938757,0,0.404632921719196,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.7127581957859,8.02707439306232,0.593768556259299,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,0,0.508280908292259,0,0,0.376963056338593,0,0,0,0.162241263067758,0.101839363850316,1.24406970610093,0,0,0.520481771850815,0,0.540186389416048,0.60281927134286,0.612328492361951,0.512454881139399,0.562210347358373,0,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,1.40442637462647,0.772043721344145,1.13665399758237,0,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.268412837520744,0,0.102904612379284,0,0,0.426576501070468,0.928946687441754,0.128867461322093,0,0.667134131534611,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0.456994050438915,0,0.814605311381257,0.581857461502877,0.350679099451593,0.0632365371242573,0,0.156998727841375,0,0,0.667380422864376,0.589676985339609,0.224862112384854,1.21716072833102,0,0.25462585178142,0.575392274901621,0.324270453550071,0.549122826376163,0,0,0,0.757736633841335,0,0,0.923765950833023,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.81931657357869,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0.485561272309963,1.209294227859,0,0.295301892880773,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0,0.517434735131018,0.428674070063185,0.354680467284547,0,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0.874442509889552,0,1.02522528478712,0.206386867963223,0.370389054739423,0.376736914009382,2.7338845544205,2.51655990527175,0.339956859987711,0.69975726161829,0.552799895217695,0,0.474503990371703,0.406638934253697,0.108005340821801,0.418176592028937,0,0,0,0,0,0.621339313086926,10.1464728963154,0.448549638131936,0.165458490457098,0.777804753376191,0.774958940866387,0.844780627453891,0.234714477291508,0.13020438484395,2.20204623293993,8.21386010808421,5.18454011264158,18.6446561170625,1.21635129174099,1.23253148597793,2.85825810551149,6.62398773969681,9.73538638428198,9.73583141111748,10.485956429395,17.4671958410295,14.707913684415,16.1321896218945,18.127165817594,19.0499446447852,21.0378423926824,0.226730383615211,0.443971906748129,0.717710852875806,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.463537303779422,0.38581844092741,0,0.147198920134397,1.02860775715625,0.887379030796687,0.715308569841963,0.436039249896986,0.470546902076653,0.423073039458382,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.29551344712669,0,0.154936841185966,0,0,0.467863216890817,0,0,0.220591419119515,0 | |||
|short_description=p2@Sarnp | |||
}} |
Revision as of 16:12, 12 September 2013
Short description: | p2@Sarnp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sarnp_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 0bp_to_ENSMUST00000105230, NM_025364, uc007hoq.2, uc007hor.2, uc007hos.2, uc011xqk.1_5end |
EntrezGene: | Sarnp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.