FFCP PHASE1:Mm9::chrX:113459342..113459347,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=896|UniProt=|association_with_transcript=1bp_to_ENSMUST00000082617_5end|description=CAGE_peak_1_at_ENSMUST00000082617_5end|id=chrX:113459342..113459347,+|ontology_enrichment_celltype=CL:0002319!2.65e-27!43;CL:0000055!7.66e-27!50;CL:0000221!1.86e-26!44;CL:0000133!1.86e-26!44;CL:0002321!2.85e-23!70;CL:0000220!2.85e-23!70;CL:0000393!2.43e-22!39;CL:0000211!2.43e-22!39;CL:0000117!3.14e-22!23;CL:0000337!3.14e-22!23;CL:0000540!3.24e-22!33;CL:0000047!3.24e-22!33;CL:0000031!3.24e-22!33;CL:0000404!3.24e-22!33;CL:0000548!2.58e-20!115;CL:0000004!2.58e-20!115;CL:0000255!2.58e-20!115;CL:0000723!1.21e-19!91;CL:0000048!1.21e-19!91;CL:0002371!1.93e-19!118;CL:0000034!9.71e-19!97;CL:0000144!1.30e-18!121;CL:0000012!1.30e-18!121;CL:0002609!3.76e-09!6;CL:0002453!9.40e-08!8|ontology_enrichment_celltype_v019_2=CL:0000117,7.91e-13,23;CL:0000337,7.91e-13,23;CL:0002476,6.17e-11,2;CL:0002611,8.68e-11,2;CL:0000540,1.19e-08,33;CL:0000047,1.19e-08,33;CL:0000031,1.19e-08,33;CL:0000404,1.19e-08,33;CL:0002319,3.83e-08,43;CL:0000221,6.25e-08,44;CL:0000133,6.25e-08,44;CL:0000764,8.36e-08,3;CL:0000765,8.36e-08,3;CL:0000038,8.36e-08,3;CL:0000547,8.36e-08,3;CL:0000723,2.54e-07,91;CL:0000048,2.54e-07,91;CL:0002612,2.78e-07,3;CL:0000393,3.60e-07,39;CL:0000211,3.60e-07,39;CL:0002321,6.63e-07,70;CL:0000034,9.66e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,8.36e-08,3;DOID:0060083,8.36e-08,3;DOID:1240,8.36e-08,3|ontology_enrichment_uberon=UBERON:0001017!1.66e-23!73;UBERON:0005743!1.66e-23!73;UBERON:0000073!1.48e-22!75;UBERON:0001016!1.48e-22!75;UBERON:0002020!3.35e-22!34;UBERON:0001049!9.75e-17!52;UBERON:0005068!9.75e-17!52;UBERON:0006241!9.75e-17!52;UBERON:0007135!9.75e-17!52;UBERON:0002791!6.19e-16!29;UBERON:0003528!6.19e-16!29;UBERON:0001893!6.19e-16!29;UBERON:0004121!3.93e-15!102;UBERON:0000924!3.93e-15!102;UBERON:0006601!3.93e-15!102;UBERON:0000956!5.93e-13!21;UBERON:0001869!5.93e-13!21;UBERON:0000203!5.93e-13!21;UBERON:0002346!6.69e-13!71;UBERON:0003075!6.69e-13!71;UBERON:0007284!6.69e-13!71;UBERON:0002616!2.01e-12!49;UBERON:0000955!4.98e-12!50;UBERON:0006238!4.98e-12!50;UBERON:0002619!1.83e-10!17;UBERON:0002780!2.50e-10!39;UBERON:0001890!2.50e-10!39;UBERON:0006240!2.50e-10!39;UBERON:0003080!6.29e-10!40;UBERON:0002240!4.58e-09!6;UBERON:0005174!4.58e-09!6;UBERON:0001137!4.58e-09!6;UBERON:0000033!7.40e-09!63;UBERON:0003076!1.71e-08!12;UBERON:0003057!1.71e-08!12;UBERON:0001948!2.43e-08!5;UBERON:0002315!2.43e-08!5;UBERON:0003056!7.09e-08!49;UBERON:0000025!9.87e-08!114;UBERON:0007811!6.77e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001948,9.63e-16,5;UBERON:0002315,9.63e-16,5;UBERON:0002020,3.53e-13,34;UBERON:0002240,3.68e-13,6;UBERON:0005174,3.68e-13,6;UBERON:0001137,3.68e-13,6;UBERON:0000073,1.89e-11,54;UBERON:0002256,8.68e-11,2;UBERON:0003076,4.61e-10,12;UBERON:0003057,4.61e-10,12;UBERON:0001049,6.10e-10,52;UBERON:0005068,6.10e-10,52;UBERON:0006241,6.10e-10,52;UBERON:0007135,6.10e-10,52;UBERON:0001017,5.39e-08,73;UBERON:0002346,9.06e-08,64;UBERON:0003075,9.06e-08,64;UBERON:0007284,9.06e-08,64;UBERON:0001016,9.87e-08,75;UBERON:0002257,2.78e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0.174840804837995,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,2.54012269383853,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,1.56478268869608,0.218025156380447,0.878744730937887,0.777719596297134,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,0.606949382578793,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,2.56511282830212,0.841299845405528,1.14260393761521,1.98781686856452,0.857435594504678,0.862609239164127,4.5960939330501,0,0.638436690425939,1.38245879930619,0.791317726381163,0.731901148819277,1.04182674111352,0.558365998002762,0,0.763991238884051,1.17851434189467,1.28134512719193,0.931997229126503,0,0,0.289864488701678,0,0,1.61910957491345,0.649776417447669,0.896053774194671,0,0,0,0,0,0,0,0,0,0,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0.631016438832513,0,0.861693590931196,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0,0,0,0,0,0.460325236507177,0.572895513439397,1.3748254587495,2.05524755931193,0,0.675022500231806,0.45032120322422,1.35942722695261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000082617}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=896 | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENSMUST00000082617_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000082617_5end | |||
|id=chrX:113459342..113459347,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.65e-27!43;CL:0000055!7.66e-27!50;CL:0000221!1.86e-26!44;CL:0000133!1.86e-26!44;CL:0002321!2.85e-23!70;CL:0000220!2.85e-23!70;CL:0000393!2.43e-22!39;CL:0000211!2.43e-22!39;CL:0000117!3.14e-22!23;CL:0000337!3.14e-22!23;CL:0000540!3.24e-22!33;CL:0000047!3.24e-22!33;CL:0000031!3.24e-22!33;CL:0000404!3.24e-22!33;CL:0000548!2.58e-20!115;CL:0000004!2.58e-20!115;CL:0000255!2.58e-20!115;CL:0000723!1.21e-19!91;CL:0000048!1.21e-19!91;CL:0002371!1.93e-19!118;CL:0000034!9.71e-19!97;CL:0000144!1.30e-18!121;CL:0000012!1.30e-18!121;CL:0002609!3.76e-09!6;CL:0002453!9.40e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.91e-13,23;CL:0000337,7.91e-13,23;CL:0002476,6.17e-11,2;CL:0002611,8.68e-11,2;CL:0000540,1.19e-08,33;CL:0000047,1.19e-08,33;CL:0000031,1.19e-08,33;CL:0000404,1.19e-08,33;CL:0002319,3.83e-08,43;CL:0000221,6.25e-08,44;CL:0000133,6.25e-08,44;CL:0000764,8.36e-08,3;CL:0000765,8.36e-08,3;CL:0000038,8.36e-08,3;CL:0000547,8.36e-08,3;CL:0000723,2.54e-07,91;CL:0000048,2.54e-07,91;CL:0002612,2.78e-07,3;CL:0000393,3.60e-07,39;CL:0000211,3.60e-07,39;CL:0002321,6.63e-07,70;CL:0000034,9.66e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.36e-08,3;DOID:0060083,8.36e-08,3;DOID:1240,8.36e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.66e-23!73;UBERON:0005743!1.66e-23!73;UBERON:0000073!1.48e-22!75;UBERON:0001016!1.48e-22!75;UBERON:0002020!3.35e-22!34;UBERON:0001049!9.75e-17!52;UBERON:0005068!9.75e-17!52;UBERON:0006241!9.75e-17!52;UBERON:0007135!9.75e-17!52;UBERON:0002791!6.19e-16!29;UBERON:0003528!6.19e-16!29;UBERON:0001893!6.19e-16!29;UBERON:0004121!3.93e-15!102;UBERON:0000924!3.93e-15!102;UBERON:0006601!3.93e-15!102;UBERON:0000956!5.93e-13!21;UBERON:0001869!5.93e-13!21;UBERON:0000203!5.93e-13!21;UBERON:0002346!6.69e-13!71;UBERON:0003075!6.69e-13!71;UBERON:0007284!6.69e-13!71;UBERON:0002616!2.01e-12!49;UBERON:0000955!4.98e-12!50;UBERON:0006238!4.98e-12!50;UBERON:0002619!1.83e-10!17;UBERON:0002780!2.50e-10!39;UBERON:0001890!2.50e-10!39;UBERON:0006240!2.50e-10!39;UBERON:0003080!6.29e-10!40;UBERON:0002240!4.58e-09!6;UBERON:0005174!4.58e-09!6;UBERON:0001137!4.58e-09!6;UBERON:0000033!7.40e-09!63;UBERON:0003076!1.71e-08!12;UBERON:0003057!1.71e-08!12;UBERON:0001948!2.43e-08!5;UBERON:0002315!2.43e-08!5;UBERON:0003056!7.09e-08!49;UBERON:0000025!9.87e-08!114;UBERON:0007811!6.77e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,9.63e-16,5;UBERON:0002315,9.63e-16,5;UBERON:0002020,3.53e-13,34;UBERON:0002240,3.68e-13,6;UBERON:0005174,3.68e-13,6;UBERON:0001137,3.68e-13,6;UBERON:0000073,1.89e-11,54;UBERON:0002256,8.68e-11,2;UBERON:0003076,4.61e-10,12;UBERON:0003057,4.61e-10,12;UBERON:0001049,6.10e-10,52;UBERON:0005068,6.10e-10,52;UBERON:0006241,6.10e-10,52;UBERON:0007135,6.10e-10,52;UBERON:0001017,5.39e-08,73;UBERON:0002346,9.06e-08,64;UBERON:0003075,9.06e-08,64;UBERON:0007284,9.06e-08,64;UBERON:0001016,9.87e-08,75;UBERON:0002257,2.78e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0.174840804837995,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,2.54012269383853,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,1.56478268869608,0.218025156380447,0.878744730937887,0.777719596297134,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,0.606949382578793,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,2.56511282830212,0.841299845405528,1.14260393761521,1.98781686856452,0.857435594504678,0.862609239164127,4.5960939330501,0,0.638436690425939,1.38245879930619,0.791317726381163,0.731901148819277,1.04182674111352,0.558365998002762,0,0.763991238884051,1.17851434189467,1.28134512719193,0.931997229126503,0,0,0.289864488701678,0,0,1.61910957491345,0.649776417447669,0.896053774194671,0,0,0,0,0,0,0,0,0,0,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0.631016438832513,0,0.861693590931196,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0,0,0,0,0,0.460325236507177,0.572895513439397,1.3748254587495,2.05524755931193,0,0.675022500231806,0.45032120322422,1.35942722695261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000082617 | |||
}} |
Revision as of 19:14, 14 September 2013
Short description: | p1@ENSMUST00000082617 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082617_5end |
Coexpression cluster: | MCL_coexpression_mm9:896 |
Association with transcript: | 1bp_to_ENSMUST00000082617_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.91e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.91e-13 | 23 |
bone marrow macrophage | 6.17e-11 | 2 |
neuron of the dorsal spinal cord | 8.68e-11 | 2 |
neuron | 1.19e-08 | 33 |
neuronal stem cell | 1.19e-08 | 33 |
neuroblast | 1.19e-08 | 33 |
electrically signaling cell | 1.19e-08 | 33 |
neural cell | 3.83e-08 | 43 |
ectodermal cell | 6.25e-08 | 44 |
neurectodermal cell | 6.25e-08 | 44 |
erythroid lineage cell | 8.36e-08 | 3 |
erythroblast | 8.36e-08 | 3 |
erythroid progenitor cell | 8.36e-08 | 3 |
proerythroblast | 8.36e-08 | 3 |
somatic stem cell | 2.54e-07 | 91 |
multi fate stem cell | 2.54e-07 | 91 |
neuron of the ventral spinal cord | 2.78e-07 | 3 |
electrically responsive cell | 3.60e-07 | 39 |
electrically active cell | 3.60e-07 | 39 |
embryonic cell | 6.63e-07 | 70 |
stem cell | 9.66e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 9.63e-16 | 5 |
gray matter of spinal cord | 9.63e-16 | 5 |
gray matter | 3.53e-13 | 34 |
spinal cord | 3.68e-13 | 6 |
dorsal region element | 3.68e-13 | 6 |
dorsum | 3.68e-13 | 6 |
regional part of nervous system | 1.89e-11 | 54 |
dorsal horn of spinal cord | 8.68e-11 | 2 |
posterior neural tube | 4.61e-10 | 12 |
chordal neural plate | 4.61e-10 | 12 |
neural tube | 6.10e-10 | 52 |
neural rod | 6.10e-10 | 52 |
future spinal cord | 6.10e-10 | 52 |
neural keel | 6.10e-10 | 52 |
central nervous system | 5.39e-08 | 73 |
neurectoderm | 9.06e-08 | 64 |
neural plate | 9.06e-08 | 64 |
presumptive neural plate | 9.06e-08 | 64 |
nervous system | 9.87e-08 | 75 |
ventral horn of spinal cord | 2.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.36e-08 | 3 |
immune system cancer | 8.36e-08 | 3 |
leukemia | 8.36e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.