FFCP PHASE1:Mm9::chr8:113264957..113264971,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=303|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:113264957..113264971,+|id=chr8:113264957..113264971,+|ontology_enrichment_celltype=CL:0000117!2.62e-10!23;CL:0000337!2.62e-10!23;CL:0000221!9.60e-10!44;CL:0000133!9.60e-10!44;CL:0002319!2.43e-09!43;CL:0000055!3.74e-07!50;CL:0000540!4.45e-07!33;CL:0000047!4.45e-07!33;CL:0000031!4.45e-07!33;CL:0000404!4.45e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-10,23;CL:0000337,1.71e-10,23;CL:0000221,1.57e-09,44;CL:0000133,1.57e-09,44;CL:0002319,4.00e-09,43;CL:0000540,5.51e-07,33;CL:0000047,5.51e-07,33;CL:0000031,5.51e-07,33;CL:0000404,5.51e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.94e-24!73;UBERON:0005743!2.94e-24!73;UBERON:0000073!6.16e-23!75;UBERON:0001016!6.16e-23!75;UBERON:0001049!1.74e-21!52;UBERON:0005068!1.74e-21!52;UBERON:0006241!1.74e-21!52;UBERON:0007135!1.74e-21!52;UBERON:0000955!2.89e-20!50;UBERON:0006238!2.89e-20!50;UBERON:0002616!1.12e-19!49;UBERON:0000033!1.82e-19!63;UBERON:0004121!6.90e-19!102;UBERON:0000924!6.90e-19!102;UBERON:0006601!6.90e-19!102;UBERON:0002346!1.95e-18!71;UBERON:0003075!1.95e-18!71;UBERON:0007284!1.95e-18!71;UBERON:0002020!9.78e-16!34;UBERON:0003080!4.35e-15!40;UBERON:0003056!1.33e-14!49;UBERON:0002780!1.67e-14!39;UBERON:0001890!1.67e-14!39;UBERON:0006240!1.67e-14!39;UBERON:0000025!6.11e-13!114;UBERON:0002791!1.11e-12!29;UBERON:0003528!1.11e-12!29;UBERON:0001893!1.11e-12!29;UBERON:0004111!1.24e-12!122;UBERON:0007811!1.71e-11!86;UBERON:0000153!7.43e-11!94;UBERON:0000956!3.97e-09!21;UBERON:0001869!3.97e-09!21;UBERON:0000203!3.97e-09!21;UBERON:0002619!5.06e-08!17;UBERON:0000477!8.41e-08!154;UBERON:0000468!1.42e-07!333;UBERON:0003076!3.42e-07!12;UBERON:0003057!3.42e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.12e-24,73;UBERON:0000073,3.56e-23,54;UBERON:0001016,1.08e-22,75;UBERON:0001049,1.10e-21,52;UBERON:0005068,1.10e-21,52;UBERON:0006241,1.10e-21,52;UBERON:0007135,1.10e-21,52;UBERON:0002346,9.80e-20,64;UBERON:0003075,9.80e-20,64;UBERON:0007284,9.80e-20,64;UBERON:0004121,9.34e-19,95;UBERON:0000924,9.34e-19,95;UBERON:0006601,9.34e-19,95;UBERON:0000955,1.94e-18,47;UBERON:0006238,1.94e-18,47;UBERON:0010314,3.87e-18,92;UBERON:0002616,7.49e-18,46;UBERON:0010371,7.78e-18,73;UBERON:0002020,4.90e-16,34;UBERON:0003080,3.60e-15,40;UBERON:0002780,1.42e-14,39;UBERON:0001890,1.42e-14,39;UBERON:0006240,1.42e-14,39;UBERON:0003056,1.81e-14,49;UBERON:0003528,6.44e-13,29;UBERON:0002791,6.44e-13,29;UBERON:0001893,6.44e-13,29;UBERON:0000025,1.34e-12,114;UBERON:0004111,3.53e-12,122;UBERON:0000956,2.74e-09,21;UBERON:0001869,2.74e-09,21;UBERON:0000203,2.74e-09,21;UBERON:0002619,3.69e-08,17;UBERON:0003076,2.59e-07,12;UBERON:0003057,2.59e-07,12|phase1_expression=7.68714466103011,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.55129870453209,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.25896817975577,1.62203089951223,0.550640256485045,3.12956537739216,15.0437357902508,12.0827400503959,9.13820525649132,6.29938897314131,12.9377307928474,0,0.725362142011344,0,0.514518872071894,1.71920063963254,2.06268836910977,7.08107613008592,8.99284664762456,10.775133859605,0.338844532069132,0,0.449949858640699,1.97773272513395,0,36.251613372727,69.1592949578798,4.14758449233911,6.48028503992115,5.25812403378455,28.8507494247842,23.412065340871,3.91970557487853,2.39613677545591,3.67687514644008,13.2139057199266,22.0899094887375,21.1977015893616,5.40733779693795,4.57438218012048,8.33461392890816,24.2889209131201,18.0084035210138,28.1148775909331,21.8025153250514,18.3659468230843,7.64237727883732,0.757261933331841,1.058001841495,2.89864488701678,1.72084775396277,0,0,0,0.448026887097336,2.38755514223978,11.4188316127299,23.1209544096553,15.546941278455,9.29566570526091,10.2661181931454,10.1922095882658,7.11066703153331,1.08245520505607,0.760079596425296,1.01104889002957,1.59857431606684,0,0.445326417194474,3.81667718885499,2.74018930480927,4.61230994512117,2.41156224884196,2.82212897125692,0.502666365318702,0.741584903203122,1.01219549843938,0,3.558870698843,1.54589062922275,5.81850303762267,1.86391761218122,18.737971008739,9.21565509979202,0.766371165625774,0.11981512450592,0,0,14.2301107434582,6.8625090422794,11.1832373380449,10.6032835317289,10.7400492078739,16.6230435647648,12.9793010454206,1.93494791315601,2.98576729464223,4.0435641349388,0.841767423545896,4.55421550369463,2.29902104433473,1.80062129805349,4.9732589885786,3.74200745332303,3.84341160854549,4.12287588062807,3.62184719034622,3.01795190105979,3.02569728268511,2.46331573829528,4.3839146485515,1.94633074457919,1.74126083261083,2.26360350048738,4.57778813682534,0,0,0,1.86413195281952,3.04883877975425,6.12211008967451,2.13070262026689,3.14822770795846,5.24508183817086,2.55787339225449,3.48755421819505,4.08678698285093,1.97471819896177,4.76085645829376,2.269926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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:113264957..113264971,+ | |||
|id=chr8:113264957..113264971,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.62e-10!23;CL:0000337!2.62e-10!23;CL:0000221!9.60e-10!44;CL:0000133!9.60e-10!44;CL:0002319!2.43e-09!43;CL:0000055!3.74e-07!50;CL:0000540!4.45e-07!33;CL:0000047!4.45e-07!33;CL:0000031!4.45e-07!33;CL:0000404!4.45e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-10,23;CL:0000337,1.71e-10,23;CL:0000221,1.57e-09,44;CL:0000133,1.57e-09,44;CL:0002319,4.00e-09,43;CL:0000540,5.51e-07,33;CL:0000047,5.51e-07,33;CL:0000031,5.51e-07,33;CL:0000404,5.51e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.94e-24!73;UBERON:0005743!2.94e-24!73;UBERON:0000073!6.16e-23!75;UBERON:0001016!6.16e-23!75;UBERON:0001049!1.74e-21!52;UBERON:0005068!1.74e-21!52;UBERON:0006241!1.74e-21!52;UBERON:0007135!1.74e-21!52;UBERON:0000955!2.89e-20!50;UBERON:0006238!2.89e-20!50;UBERON:0002616!1.12e-19!49;UBERON:0000033!1.82e-19!63;UBERON:0004121!6.90e-19!102;UBERON:0000924!6.90e-19!102;UBERON:0006601!6.90e-19!102;UBERON:0002346!1.95e-18!71;UBERON:0003075!1.95e-18!71;UBERON:0007284!1.95e-18!71;UBERON:0002020!9.78e-16!34;UBERON:0003080!4.35e-15!40;UBERON:0003056!1.33e-14!49;UBERON:0002780!1.67e-14!39;UBERON:0001890!1.67e-14!39;UBERON:0006240!1.67e-14!39;UBERON:0000025!6.11e-13!114;UBERON:0002791!1.11e-12!29;UBERON:0003528!1.11e-12!29;UBERON:0001893!1.11e-12!29;UBERON:0004111!1.24e-12!122;UBERON:0007811!1.71e-11!86;UBERON:0000153!7.43e-11!94;UBERON:0000956!3.97e-09!21;UBERON:0001869!3.97e-09!21;UBERON:0000203!3.97e-09!21;UBERON:0002619!5.06e-08!17;UBERON:0000477!8.41e-08!154;UBERON:0000468!1.42e-07!333;UBERON:0003076!3.42e-07!12;UBERON:0003057!3.42e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.12e-24,73;UBERON:0000073,3.56e-23,54;UBERON:0001016,1.08e-22,75;UBERON:0001049,1.10e-21,52;UBERON:0005068,1.10e-21,52;UBERON:0006241,1.10e-21,52;UBERON:0007135,1.10e-21,52;UBERON:0002346,9.80e-20,64;UBERON:0003075,9.80e-20,64;UBERON:0007284,9.80e-20,64;UBERON:0004121,9.34e-19,95;UBERON:0000924,9.34e-19,95;UBERON:0006601,9.34e-19,95;UBERON:0000955,1.94e-18,47;UBERON:0006238,1.94e-18,47;UBERON:0010314,3.87e-18,92;UBERON:0002616,7.49e-18,46;UBERON:0010371,7.78e-18,73;UBERON:0002020,4.90e-16,34;UBERON:0003080,3.60e-15,40;UBERON:0002780,1.42e-14,39;UBERON:0001890,1.42e-14,39;UBERON:0006240,1.42e-14,39;UBERON:0003056,1.81e-14,49;UBERON:0003528,6.44e-13,29;UBERON:0002791,6.44e-13,29;UBERON:0001893,6.44e-13,29;UBERON:0000025,1.34e-12,114;UBERON:0004111,3.53e-12,122;UBERON:0000956,2.74e-09,21;UBERON:0001869,2.74e-09,21;UBERON:0000203,2.74e-09,21;UBERON:0002619,3.69e-08,17;UBERON:0003076,2.59e-07,12;UBERON:0003057,2.59e-07,12 | |||
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| |||
|short_description=p@chr8:113264957..113264971,+ | |||
}} |
Revision as of 14:45, 14 September 2013
Short description: | p@chr8:113264957..113264971, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:113264957..113264971, + |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.71e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-10 | 23 |
ectodermal cell | 1.57e-09 | 44 |
neurectodermal cell | 1.57e-09 | 44 |
neural cell | 4.00e-09 | 43 |
neuron | 5.51e-07 | 33 |
neuronal stem cell | 5.51e-07 | 33 |
neuroblast | 5.51e-07 | 33 |
electrically signaling cell | 5.51e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.