FFCP PHASE1:Mm9::chr7:140900752..140900782,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22276|HGNC=|UniProt=P51163,Q3UG55|association_with_transcript=0bp_to_ENSMUST00000106145,ENSMUST00000135760,uc009kdf.1_5end|description=CAGE_peak_3_at_Uros_5end|id=chr7:140900752..140900782,-|ontology_enrichment_celltype=CL:0000117!4.94e-10!23;CL:0000337!4.94e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-10,23;CL:0000337,4.94e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.36e-20!52;UBERON:0005068!5.36e-20!52;UBERON:0006241!5.36e-20!52;UBERON:0007135!5.36e-20!52;UBERON:0000955!9.67e-20!50;UBERON:0006238!9.67e-20!50;UBERON:0002616!3.09e-19!49;UBERON:0000033!4.81e-18!63;UBERON:0003080!8.27e-17!40;UBERON:0002780!3.33e-16!39;UBERON:0001890!3.33e-16!39;UBERON:0006240!3.33e-16!39;UBERON:0001017!5.58e-16!73;UBERON:0005743!5.58e-16!73;UBERON:0002020!1.63e-15!34;UBERON:0000073!1.78e-15!75;UBERON:0001016!1.78e-15!75;UBERON:0002346!2.02e-15!71;UBERON:0003075!2.02e-15!71;UBERON:0007284!2.02e-15!71;UBERON:0004121!1.69e-14!102;UBERON:0000924!1.69e-14!102;UBERON:0006601!1.69e-14!102;UBERON:0002791!2.27e-14!29;UBERON:0003528!2.27e-14!29;UBERON:0001893!2.27e-14!29;UBERON:0003056!2.42e-14!49;UBERON:0007811!1.48e-12!86;UBERON:0000153!1.22e-11!94;UBERON:0000956!1.90e-11!21;UBERON:0001869!1.90e-11!21;UBERON:0000203!1.90e-11!21;UBERON:0004111!8.64e-10!122;UBERON:0002619!2.90e-09!17;UBERON:0000025!2.39e-08!114;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-20,54;UBERON:0001049,5.35e-20,52;UBERON:0005068,5.35e-20,52;UBERON:0006241,5.35e-20,52;UBERON:0007135,5.35e-20,52;UBERON:0000955,1.28e-18,47;UBERON:0006238,1.28e-18,47;UBERON:0002616,4.03e-18,46;UBERON:0003080,8.26e-17,40;UBERON:0002346,3.17e-16,64;UBERON:0003075,3.17e-16,64;UBERON:0007284,3.17e-16,64;UBERON:0002780,3.33e-16,39;UBERON:0001890,3.33e-16,39;UBERON:0006240,3.33e-16,39;UBERON:0001017,5.44e-16,73;UBERON:0010371,7.88e-16,73;UBERON:0010314,8.00e-16,92;UBERON:0002020,1.63e-15,34;UBERON:0001016,1.74e-15,75;UBERON:0004121,7.96e-15,95;UBERON:0000924,7.96e-15,95;UBERON:0006601,7.96e-15,95;UBERON:0003528,2.27e-14,29;UBERON:0002791,2.27e-14,29;UBERON:0001893,2.27e-14,29;UBERON:0003056,2.42e-14,49;UBERON:0000956,1.90e-11,21;UBERON:0001869,1.90e-11,21;UBERON:0000203,1.90e-11,21;UBERON:0004111,8.59e-10,122;UBERON:0002619,2.90e-09,17;UBERON:0000025,2.38e-08,114;UBERON:0002021,1.79e-07,10;UBERON:0000411,1.79e-07,10;UBERON:0001950,1.79e-07,10|phase1_expression=4.32401887182944,2.09385244583617,1.36499771816861,3.0246421130683,1.00179145989269,3.18970616632591,1.63528848416868,7.36002943616985,1.12630977721333,1.63845168425395,4.28044920563762,3.58974715479014,7.70403284690426,7.78041581529077,1.66554880907831,1.21485160433896,1.39912375625629,3.78554598429885,3.83920414096069,3.81950686618227,4.08207792725135,2.28369187762036,1.30599894569468,4.63978026100879,3.44113921600755,1.72269589234506,3.4460959692726,3.44753972297422,2.66032787238923,3.52842181663903,3.76941868114018,0.635030673459631,3.69038872550742,0,4.33277429626912,3.98963148860382,4.69589519403449,2.09265815368454,5.4693474116666,1.57057123192139,2.94115744015507,2.73218193983378,2.42755176515577,7.1761186246079,5.67710814829281,3.85448179539531,2.34717403304412,4.79655344036982,3.29529274101708,4.6663175777828,4.75953833526233,0,3.85899993932794,6.5282592781021,3.6970317905671,1.54355661621568,2.86533439938757,1.54701627683233,11.1274053472779,9.52183762689659,8.87363964908651,3.72728985276045,2.66788438833342,2.2497492932035,0.988866362566974,1.4209602298922,2.99600110518405,1.92109152660777,8.50254820929517,12.4205463265155,6.30974884054146,4.85606673486466,6.40518768759679,9.92175473641128,11.0222291670972,10.1114066527102,6.60695285996332,7.91661496128164,5.37622866396852,8.96826756565318,11.9848813119157,6.77187381723788,6.14202597803038,3.93933827022176,6.72312290217964,5.89257170947335,5.55249555116501,7.26957838718672,4.31639301999149,3.40072020480535,2.31891590961342,2.58127163094416,0,3.77792234146472,1.94932925234301,4.48026887097336,5.75822122540183,2.89731548382698,1.55871602761721,3.5333957451034,4.78867627240714,0,2.54805239706646,0,1.29894624606728,1.52015919285059,2.52762222507392,3.4255163915718,5.17875767294343,4.00793775475027,4.8575891494518,6.08930956624282,3.68984795609694,4.52167921657868,2.23418543557839,4.90099706185734,3.70792451601561,5.35017620603673,2.65383165584962,7.76480879747564,6.18356251689102,4.363877278217,1.86391761218122,13.7606974595427,8.79676168616511,3.32094171771169,3.59445373517761,2.99951365496704,3.68503658511888,9.73639156131348,9.15001205637253,9.5497307605777,14.0797699355744,11.7629110371952,8.10373373782284,6.16516799657479,1.83310854930569,2.48813941220186,7.58168275301024,6.52369753248069,2.86264974517948,4.13823787980251,2.16074555766419,3.16480117455002,3.60593445502038,4.22775276940004,5.15359485078509,9.31332134660456,3.01795190105979,3.9712276835242,4.04687585577082,3.50713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| ||
|EntrezGene=22276 | |||
|HGNC= | |||
|UniProt=P51163,Q3UG55 | |||
|association_with_transcript=0bp_to_ENSMUST00000106145,ENSMUST00000135760,uc009kdf.1_5end | |||
|description=CAGE_peak_3_at_Uros_5end | |||
|id=chr7:140900752..140900782,- | |||
|ontology_enrichment_celltype=CL:0000117!4.94e-10!23;CL:0000337!4.94e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-10,23;CL:0000337,4.94e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.36e-20!52;UBERON:0005068!5.36e-20!52;UBERON:0006241!5.36e-20!52;UBERON:0007135!5.36e-20!52;UBERON:0000955!9.67e-20!50;UBERON:0006238!9.67e-20!50;UBERON:0002616!3.09e-19!49;UBERON:0000033!4.81e-18!63;UBERON:0003080!8.27e-17!40;UBERON:0002780!3.33e-16!39;UBERON:0001890!3.33e-16!39;UBERON:0006240!3.33e-16!39;UBERON:0001017!5.58e-16!73;UBERON:0005743!5.58e-16!73;UBERON:0002020!1.63e-15!34;UBERON:0000073!1.78e-15!75;UBERON:0001016!1.78e-15!75;UBERON:0002346!2.02e-15!71;UBERON:0003075!2.02e-15!71;UBERON:0007284!2.02e-15!71;UBERON:0004121!1.69e-14!102;UBERON:0000924!1.69e-14!102;UBERON:0006601!1.69e-14!102;UBERON:0002791!2.27e-14!29;UBERON:0003528!2.27e-14!29;UBERON:0001893!2.27e-14!29;UBERON:0003056!2.42e-14!49;UBERON:0007811!1.48e-12!86;UBERON:0000153!1.22e-11!94;UBERON:0000956!1.90e-11!21;UBERON:0001869!1.90e-11!21;UBERON:0000203!1.90e-11!21;UBERON:0004111!8.64e-10!122;UBERON:0002619!2.90e-09!17;UBERON:0000025!2.39e-08!114;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-20,54;UBERON:0001049,5.35e-20,52;UBERON:0005068,5.35e-20,52;UBERON:0006241,5.35e-20,52;UBERON:0007135,5.35e-20,52;UBERON:0000955,1.28e-18,47;UBERON:0006238,1.28e-18,47;UBERON:0002616,4.03e-18,46;UBERON:0003080,8.26e-17,40;UBERON:0002346,3.17e-16,64;UBERON:0003075,3.17e-16,64;UBERON:0007284,3.17e-16,64;UBERON:0002780,3.33e-16,39;UBERON:0001890,3.33e-16,39;UBERON:0006240,3.33e-16,39;UBERON:0001017,5.44e-16,73;UBERON:0010371,7.88e-16,73;UBERON:0010314,8.00e-16,92;UBERON:0002020,1.63e-15,34;UBERON:0001016,1.74e-15,75;UBERON:0004121,7.96e-15,95;UBERON:0000924,7.96e-15,95;UBERON:0006601,7.96e-15,95;UBERON:0003528,2.27e-14,29;UBERON:0002791,2.27e-14,29;UBERON:0001893,2.27e-14,29;UBERON:0003056,2.42e-14,49;UBERON:0000956,1.90e-11,21;UBERON:0001869,1.90e-11,21;UBERON:0000203,1.90e-11,21;UBERON:0004111,8.59e-10,122;UBERON:0002619,2.90e-09,17;UBERON:0000025,2.38e-08,114;UBERON:0002021,1.79e-07,10;UBERON:0000411,1.79e-07,10;UBERON:0001950,1.79e-07,10 | |||
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| |||
|short_description=p3@Uros | |||
}} |
Revision as of 12:06, 14 September 2013
Short description: | p3@Uros |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Uros_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000106145, ENSMUST00000135760, uc009kdf.1_5end |
EntrezGene: | Uros |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.94e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.94e-10 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.